RNA–Protein interactions for RNA: ENST00000465441.1

CSPG5-204, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

TSL 4

Gene CSPG5, Length 593 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-204ENST00000465441 PMS2CLQ68D20 193 aa22.03■■□□□ 1.12
CSPG5-204ENST00000465441 HTR3DQ70Z44 454 aa22.03■■□□□ 1.12
CSPG5-204ENST00000465441 C11orf74Q86VG3 221 aa22.03■■□□□ 1.12
CSPG5-204ENST00000465441 JAKMIP2Q96AA8 810 aa22.03■■□□□ 1.12
CSPG5-204ENST00000465441 IMPG2Q9BZV3 1241 aa22.03■■□□□ 1.12
CSPG5-204ENST00000465441 SCAND2PQ9GZW5 306 aaPredicted RBP22.03■■□□□ 1.12
CSPG5-204ENST00000465441 SCML2Q9UQR0 700 aa22.03■■□□□ 1.12
CSPG5-204ENST00000465441 GTF3C3Q9Y5Q9 886 aa22.03■■□□□ 1.12
CSPG5-204ENST00000465441 SPTBN2O15020 2390 aa22.03■■□□□ 1.12
CSPG5-204ENST00000465441 GREM1O60565 184 aa22.02■■□□□ 1.12
CSPG5-204ENST00000465441 ADAM23O75077 832 aa22.02■■□□□ 1.12
CSPG5-204ENST00000465441 CD58P19256 250 aa22.02■■□□□ 1.12
CSPG5-204ENST00000465441 TRIM21P19474 475 aaKnown RBP22.02■■□□□ 1.12
CSPG5-204ENST00000465441 ACO1P21399 889 aaKnown RBP22.02■■□□□ 1.12
CSPG5-204ENST00000465441 KCNA4P22459 653 aa22.02■■□□□ 1.12
CSPG5-204ENST00000465441 ATP5C1P36542 298 aaKnown RBP22.02■■□□□ 1.12
CSPG5-204ENST00000465441 ENPEPQ07075 957 aa22.02■■□□□ 1.12
CSPG5-204ENST00000465441 OLIG1Q8TAK6 271 aa22.02■■□□□ 1.12
CSPG5-204ENST00000465441 RLN3Q8WXF3 142 aa22.02■■□□□ 1.12
CSPG5-204ENST00000465441 NMUR1Q9HB89 426 aa22.02■■□□□ 1.12
CSPG5-204ENST00000465441 POLMQ9NP87 494 aaPredicted RBP22.02■■□□□ 1.12
CSPG5-204ENST00000465441 DEC1Q9P2X7 70 aa22.02■■□□□ 1.12
CSPG5-204ENST00000465441 TRIM24O15164 1050 aa22.01■■□□□ 1.11
CSPG5-204ENST00000465441 CILPO75339 1184 aa22.01■■□□□ 1.11
CSPG5-204ENST00000465441 MCCD1P59942 119 aaPredicted RBP22.01■■□□□ 1.11
CSPG5-204ENST00000465441 RNF43Q68DV7 783 aa22.01■■□□□ 1.11
CSPG5-204ENST00000465441 GDPD2Q9HCC8 539 aa22.01■■□□□ 1.11
CSPG5-204ENST00000465441 TMEM8AQ9HCN3 771 aa22.01■■□□□ 1.11
CSPG5-204ENST00000465441 CYLDQ9NQC7 956 aa22.01■■□□□ 1.11
CSPG5-204ENST00000465441 NUDT5Q9UKK9 219 aa22.01■■□□□ 1.11
CSPG5-204ENST00000465441 ATP6V1DQ9Y5K8 247 aa22.01■■□□□ 1.11
CSPG5-204ENST00000465441 A0A1W2PQH9 124 aa22■■□□□ 1.11
CSPG5-204ENST00000465441 CYP26A1O43174 497 aa22■■□□□ 1.11
CSPG5-204ENST00000465441 RARGP13631 454 aa22■■□□□ 1.11
CSPG5-204ENST00000465441 PREPLQ4J6C6 727 aaPredicted RBP22■■□□□ 1.11
CSPG5-204ENST00000465441 ZCWPW2Q504Y3 356 aa22■■□□□ 1.11
CSPG5-204ENST00000465441 PPP1R26Q5T8A7 1209 aaPredicted RBP22■■□□□ 1.11
CSPG5-204ENST00000465441 KRT39Q6A163 491 aa22■■□□□ 1.11
CSPG5-204ENST00000465441 FRMD1Q8N878 549 aa22■■□□□ 1.11
CSPG5-204ENST00000465441 CCDC150Q8NCX0 1101 aa22■■□□□ 1.11
CSPG5-204ENST00000465441 SEMA4DQ92854 862 aa22■■□□□ 1.11
CSPG5-204ENST00000465441 EEF2KMTQ96G04 330 aa22■■□□□ 1.11
CSPG5-204ENST00000465441 LSM14BQ9BX40 385 aaKnown RBP22■■□□□ 1.11
CSPG5-204ENST00000465441 NIF3L1Q9GZT8 377 aa22■■□□□ 1.11
CSPG5-204ENST00000465441 PNPLA8Q9NP80 782 aa22■■□□□ 1.11
CSPG5-204ENST00000465441 HCN2Q9UL51 889 aa22■■□□□ 1.11
CSPG5-204ENST00000465441 MYO18AQ92614 2054 aaKnown RBP22■■□□□ 1.11
CSPG5-204ENST00000465441 THADAQ6YHU6 1953 aa21.99■■□□□ 1.11
CSPG5-204ENST00000465441 MDM4O15151 490 aa21.99■■□□□ 1.11
CSPG5-204ENST00000465441 GTF2H1P32780 548 aa21.99■■□□□ 1.11
CSPG5-204ENST00000465441 P2RY2P41231 377 aa21.99■■□□□ 1.11
CSPG5-204ENST00000465441 PLA2G4AP47712 749 aa21.99■■□□□ 1.11
CSPG5-204ENST00000465441 KIF11P52732 1056 aa21.99■■□□□ 1.11
CSPG5-204ENST00000465441 ZNF394Q53GI3 561 aa21.99■■□□□ 1.11
CSPG5-204ENST00000465441 N4BP2L1Q5TBK1 243 aaPredicted RBP21.99■■□□□ 1.11
CSPG5-204ENST00000465441 TPGS1Q6ZTW0 290 aa21.99■■□□□ 1.11
CSPG5-204ENST00000465441 SMYD4Q8IYR2 804 aaPredicted RBP21.99■■□□□ 1.11
CSPG5-204ENST00000465441 TERB1Q8NA31 727 aa21.99■■□□□ 1.11
CSPG5-204ENST00000465441 KCNV2Q8TDN2 545 aa21.99■■□□□ 1.11
CSPG5-204ENST00000465441 DUSP16Q9BY84 665 aa21.99■■□□□ 1.11
CSPG5-204ENST00000465441 MTPAPQ9NVV4 582 aaKnown RBP eCLIP21.99■■□□□ 1.11
CSPG5-204ENST00000465441 PCDHA5Q9Y5H7 936 aa21.99■■□□□ 1.11
CSPG5-204ENST00000465441 DHPSP49366 369 aaPredicted RBP21.98■■□□□ 1.11
CSPG5-204ENST00000465441 EDRF1Q3B7T1 1238 aa21.98■■□□□ 1.11
CSPG5-204ENST00000465441 C10orf76Q5T2E6 689 aa21.98■■□□□ 1.11
CSPG5-204ENST00000465441 KLHDC10Q6PID8 442 aa21.98■■□□□ 1.11
CSPG5-204ENST00000465441 NUDT18Q6ZVK8 323 aa21.98■■□□□ 1.11
CSPG5-204ENST00000465441 SCD5Q86SK9 330 aa21.98■■□□□ 1.11
CSPG5-204ENST00000465441 PGBD3Q8N328 593 aa21.98■■□□□ 1.11
CSPG5-204ENST00000465441 ZNF513Q8N8E2 541 aaPredicted RBP21.98■■□□□ 1.11
CSPG5-204ENST00000465441 HMGB4Q8WW32 186 aa21.98■■□□□ 1.11
CSPG5-204ENST00000465441 HEXIM2Q96MH2 286 aaKnown RBP21.98■■□□□ 1.11
CSPG5-204ENST00000465441 XPO6Q96QU8 1125 aaKnown RBP21.98■■□□□ 1.11
CSPG5-204ENST00000465441 EDEM2Q9BV94 578 aa21.98■■□□□ 1.11
CSPG5-204ENST00000465441 BCCIPQ9P287 314 aaKnown RBP eCLIP21.98■■□□□ 1.11
CSPG5-204ENST00000465441 LSM7Q9UK45 103 aaKnown RBP21.98■■□□□ 1.11
CSPG5-204ENST00000465441 CIZ1Q9ULV3 898 aaPredicted RBP21.98■■□□□ 1.11
CSPG5-204ENST00000465441 STARD13Q9Y3M8 1113 aa21.98■■□□□ 1.11
CSPG5-204ENST00000465441 USP3Q9Y6I4 520 aa21.98■■□□□ 1.11
CSPG5-204ENST00000465441 TCRBV21S2A2A0A5A6 115 aa21.97■■□□□ 1.11
CSPG5-204ENST00000465441 C4orf47A7E2U8 309 aa21.97■■□□□ 1.11
CSPG5-204ENST00000465441 KHNYNO15037 678 aaKnown RBP21.97■■□□□ 1.11
CSPG5-204ENST00000465441 GOLGA8FQ08AF8 430 aa21.97■■□□□ 1.11
CSPG5-204ENST00000465441 GOLGA8DPQ0D2H9 430 aa21.97■■□□□ 1.11
CSPG5-204ENST00000465441 MAP7D1Q3KQU3 841 aa21.97■■□□□ 1.11
CSPG5-204ENST00000465441 PIGKQ92643 395 aa21.97■■□□□ 1.11
CSPG5-204ENST00000465441 TATDN2Q93075 761 aa21.97■■□□□ 1.11
CSPG5-204ENST00000465441 BBS2Q9BXC9 721 aa21.97■■□□□ 1.11
CSPG5-204ENST00000465441 DNAJC17Q9NVM6 304 aaKnown RBP21.97■■□□□ 1.11
CSPG5-204ENST00000465441 RAB20Q9NX57 234 aa21.97■■□□□ 1.11
CSPG5-204ENST00000465441 WDR35Q9P2L0 1181 aa21.97■■□□□ 1.11
CSPG5-204ENST00000465441 MBD1Q9UIS9 605 aaPredicted RBP21.97■■□□□ 1.11
CSPG5-204ENST00000465441 DNMT3LQ9UJW3 386 aa21.97■■□□□ 1.11
CSPG5-204ENST00000465441 NAGPAQ9UK23 515 aa21.97■■□□□ 1.11
CSPG5-204ENST00000465441 NUP205Q92621 2012 aa21.96■■□□□ 1.11
CSPG5-204ENST00000465441 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa21.96■■□□□ 1.11
CSPG5-204ENST00000465441 PATE3B3GLJ2 98 aa21.96■■□□□ 1.11
CSPG5-204ENST00000465441 NEDD8-MDP1E9PL57 170 aa21.96■■□□□ 1.11
CSPG5-204ENST00000465441 CETN3O15182 167 aa21.96■■□□□ 1.11
CSPG5-204ENST00000465441 MAP3K13O43283 966 aa21.96■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms