RNA–Protein interactions for RNA: ENST00000465245.1

TRA2B-208, Transcript of transformer 2 beta homolog, humanhuman

TSL 3

Gene TRA2B, Length 634 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-208ENST00000465245 TNNC1P63316 161 aa12.76□□□□□ -0.37
TRA2B-208ENST00000465245 SF3A1Q15459 793 aaKnown RBP12.76□□□□□ -0.37
TRA2B-208ENST00000465245 USP49Q70CQ1 688 aa12.76□□□□□ -0.37
TRA2B-208ENST00000465245 SV2BQ7L1I2 683 aa12.76□□□□□ -0.37
TRA2B-208ENST00000465245 ZCCHC9Q8N567 271 aaKnown RBP12.76□□□□□ -0.37
TRA2B-208ENST00000465245 B3GALNT2Q8NCR0 500 aa12.76□□□□□ -0.37
TRA2B-208ENST00000465245 WBP2Q969T9 261 aa12.76□□□□□ -0.37
TRA2B-208ENST00000465245 EPSTI1Q96J88 318 aa12.76□□□□□ -0.37
TRA2B-208ENST00000465245 MRGPRX1Q96LB2 322 aa12.76□□□□□ -0.37
TRA2B-208ENST00000465245 XPO6Q96QU8 1125 aaKnown RBP12.76□□□□□ -0.37
TRA2B-208ENST00000465245 GABRG3Q99928 467 aa12.76□□□□□ -0.37
TRA2B-208ENST00000465245 DUSP9Q99956 384 aaKnown RBP12.76□□□□□ -0.37
TRA2B-208ENST00000465245 FGFBP2Q9BYJ0 223 aa12.76□□□□□ -0.37
TRA2B-208ENST00000465245 CACNA2D2Q9NY47 1150 aa12.76□□□□□ -0.37
TRA2B-208ENST00000465245 CCDC39Q9UFE4 941 aa12.76□□□□□ -0.37
TRA2B-208ENST00000465245 CHORDC1Q9UHD1 332 aaPredicted RBP12.76□□□□□ -0.37
TRA2B-208ENST00000465245 PRRT4C9JH25 899 aa12.75□□□□□ -0.37
TRA2B-208ENST00000465245 CACNG3O60359 315 aa12.75□□□□□ -0.37
TRA2B-208ENST00000465245 ATP8B3O60423 1300 aa12.75□□□□□ -0.37
TRA2B-208ENST00000465245 CER1O95813 267 aa12.75□□□□□ -0.37
TRA2B-208ENST00000465245 TYRP14679 529 aa12.75□□□□□ -0.37
TRA2B-208ENST00000465245 CD6P30203 668 aa12.75□□□□□ -0.37
TRA2B-208ENST00000465245 TUBP50607 506 aa12.75□□□□□ -0.37
TRA2B-208ENST00000465245 SLC5A3P53794 718 aa12.75□□□□□ -0.37
TRA2B-208ENST00000465245 TP53BP1Q12888 1972 aaPredicted RBP12.75□□□□□ -0.37
TRA2B-208ENST00000465245 TRAPPC11Q7Z392 1133 aa12.75□□□□□ -0.37
TRA2B-208ENST00000465245 CBWD2Q8IUF1 395 aa12.75□□□□□ -0.37
TRA2B-208ENST00000465245 WDR49Q8IV35 697 aa12.75□□□□□ -0.37
TRA2B-208ENST00000465245 SCAMP5Q8TAC9 235 aa12.75□□□□□ -0.37
TRA2B-208ENST00000465245 KIF2CQ99661 725 aa12.75□□□□□ -0.37
TRA2B-208ENST00000465245 BBS2Q9BXC9 721 aa12.75□□□□□ -0.37
TRA2B-208ENST00000465245 B3GNT5Q9BYG0 378 aa12.75□□□□□ -0.37
TRA2B-208ENST00000465245 MIR1-1HGQ9H1L0 117 aa12.75□□□□□ -0.37
TRA2B-208ENST00000465245 IL21RQ9HBE5 538 aa12.75□□□□□ -0.37
TRA2B-208ENST00000465245 GMIPQ9P107 970 aa12.75□□□□□ -0.37
TRA2B-208ENST00000465245 KIAA1522Q9P206 1035 aaPredicted RBP12.75□□□□□ -0.37
TRA2B-208ENST00000465245 DKK4Q9UBT3 224 aa12.75□□□□□ -0.37
TRA2B-208ENST00000465245 ASXL3Q9C0F0 2248 aa12.74□□□□□ -0.37
TRA2B-208ENST00000465245 CKAP5Q14008 2032 aa12.74□□□□□ -0.37
TRA2B-208ENST00000465245 A8MXQ7 604 aa12.74□□□□□ -0.37
TRA2B-208ENST00000465245 NCAM1P13591 858 aa12.74□□□□□ -0.37
TRA2B-208ENST00000465245 MATKP42679 507 aa12.74□□□□□ -0.37
TRA2B-208ENST00000465245 WDR72Q3MJ13 1102 aa12.74□□□□□ -0.37
TRA2B-208ENST00000465245 SNX30Q5VWJ9 437 aa12.74□□□□□ -0.37
TRA2B-208ENST00000465245 RRAGBQ5VZM2 374 aa12.74□□□□□ -0.37
TRA2B-208ENST00000465245 TPGS1Q6ZTW0 290 aa12.74□□□□□ -0.37
TRA2B-208ENST00000465245 TMPRSS7Q7RTY8 843 aa12.74□□□□□ -0.37
TRA2B-208ENST00000465245 FAM35AQ86V20 835 aa12.74□□□□□ -0.37
TRA2B-208ENST00000465245 GLIS3Q8NEA6 775 aa12.74□□□□□ -0.37
TRA2B-208ENST00000465245 DNASE2BQ8WZ79 361 aa12.74□□□□□ -0.37
TRA2B-208ENST00000465245 TOE1Q96GM8 510 aaKnown RBP12.74□□□□□ -0.37
TRA2B-208ENST00000465245 KCNK16Q96T55 309 aa12.74□□□□□ -0.37
TRA2B-208ENST00000465245 MED10Q9BTT4 135 aa12.74□□□□□ -0.37
TRA2B-208ENST00000465245 GPR174Q9BXC1 333 aa12.74□□□□□ -0.37
TRA2B-208ENST00000465245 GAREM1Q9H706 876 aa12.74□□□□□ -0.37
TRA2B-208ENST00000465245 DMAP1Q9NPF5 467 aaPredicted RBP12.74□□□□□ -0.37
TRA2B-208ENST00000465245 TM7SF3Q9NS93 570 aa12.74□□□□□ -0.37
TRA2B-208ENST00000465245 LSM7Q9UK45 103 aaKnown RBP12.74□□□□□ -0.37
TRA2B-208ENST00000465245 NFE2L3Q9Y4A8 694 aa12.74□□□□□ -0.37
TRA2B-208ENST00000465245 CABIN1Q9Y6J0 2220 aa12.74□□□□□ -0.37
TRA2B-208ENST00000465245 KNL1Q8NG31 2342 aa12.73□□□□□ -0.37
TRA2B-208ENST00000465245 FRMD3A2A2Y4 597 aa12.73□□□□□ -0.37
TRA2B-208ENST00000465245 WASH3PC4AMC7 463 aa12.73□□□□□ -0.37
TRA2B-208ENST00000465245 GFRA2O00451 464 aa12.73□□□□□ -0.37
TRA2B-208ENST00000465245 TLR5O60602 858 aa12.73□□□□□ -0.37
TRA2B-208ENST00000465245 CILPO75339 1184 aa12.73□□□□□ -0.37
TRA2B-208ENST00000465245 CST3P01034 146 aaPredicted RBP12.73□□□□□ -0.37
TRA2B-208ENST00000465245 FAM163BP0C2L3 166 aa12.73□□□□□ -0.37
TRA2B-208ENST00000465245 ZNF883P0CG24 379 aa12.73□□□□□ -0.37
TRA2B-208ENST00000465245 DLATP10515 647 aaKnown RBP12.73□□□□□ -0.37
TRA2B-208ENST00000465245 TNNI1P19237 187 aa12.73□□□□□ -0.37
TRA2B-208ENST00000465245 TXLNAP40222 546 aa12.73□□□□□ -0.37
TRA2B-208ENST00000465245 DGKGP49619 791 aa12.73□□□□□ -0.37
TRA2B-208ENST00000465245 STARD3Q14849 445 aa12.73□□□□□ -0.37
TRA2B-208ENST00000465245 HTR3DQ70Z44 454 aa12.73□□□□□ -0.37
TRA2B-208ENST00000465245 BRAPQ7Z569 592 aa12.73□□□□□ -0.37
TRA2B-208ENST00000465245 GALNT15Q8N3T1 639 aa12.73□□□□□ -0.37
TRA2B-208ENST00000465245 BAHD1Q8TBE0 780 aaPredicted RBP12.73□□□□□ -0.37
TRA2B-208ENST00000465245 TRIM9Q9C026 710 aa12.73□□□□□ -0.37
TRA2B-208ENST00000465245 PRDM16Q9HAZ2 1276 aa12.73□□□□□ -0.37
TRA2B-208ENST00000465245 PANK4Q9NVE7 773 aa12.73□□□□□ -0.37
TRA2B-208ENST00000465245 TOR4AQ9NXH8 423 aa12.73□□□□□ -0.37
TRA2B-208ENST00000465245 WSB2Q9NYS7 404 aaPredicted RBP12.73□□□□□ -0.37
TRA2B-208ENST00000465245 HSPBP1Q9NZL4 362 aa12.73□□□□□ -0.37
TRA2B-208ENST00000465245 MARK1Q9P0L2 795 aa12.73□□□□□ -0.37
TRA2B-208ENST00000465245 WDR35Q9P2L0 1181 aa12.73□□□□□ -0.37
TRA2B-208ENST00000465245 FNDC3AQ9Y2H6 1198 aaKnown RBP12.73□□□□□ -0.37
TRA2B-208ENST00000465245 GOLGA8CPA6NN73 597 aa12.72□□□□□ -0.37
TRA2B-208ENST00000465245 FLRT2O43155 660 aa12.72□□□□□ -0.37
TRA2B-208ENST00000465245 CLSTN1O94985 981 aa12.72□□□□□ -0.37
TRA2B-208ENST00000465245 ATXN1LP0C7T5 689 aaKnown RBP12.72□□□□□ -0.37
TRA2B-208ENST00000465245 ZDHHC11BP0C7U3 371 aa12.72□□□□□ -0.37
TRA2B-208ENST00000465245 CYP4F3Q08477 520 aa12.72□□□□□ -0.37
TRA2B-208ENST00000465245 GOLGA8FQ08AF8 430 aa12.72□□□□□ -0.37
TRA2B-208ENST00000465245 GOLGA8DPQ0D2H9 430 aa12.72□□□□□ -0.37
TRA2B-208ENST00000465245 TRPC3Q13507 836 aa12.72□□□□□ -0.37
TRA2B-208ENST00000465245 FUT11Q495W5 492 aa12.72□□□□□ -0.37
TRA2B-208ENST00000465245 DCAF12L1Q5VU92 463 aa12.72□□□□□ -0.37
TRA2B-208ENST00000465245 IL27RAQ6UWB1 636 aa12.72□□□□□ -0.37
TRA2B-208ENST00000465245 STXBP4Q6ZWJ1 553 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 82.5 ms