RNA–Protein interactions for RNA: ENST00000464577.1

USP48-206, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2

Gene USP48, Length 2,089 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-206ENST00000464577 GRM1Q13255 1194 aa7.57□□□□□ -1.2
USP48-206ENST00000464577 ACAP1Q15027 740 aa7.57□□□□□ -1.2
USP48-206ENST00000464577 PDK3Q15120 406 aa7.57□□□□□ -1.2
USP48-206ENST00000464577 MMEL1Q495T6 779 aa7.57□□□□□ -1.2
USP48-206ENST00000464577 TMEM259Q4ZIN3 620 aa7.57□□□□□ -1.2
USP48-206ENST00000464577 ARMC3Q5W041 872 aa7.57□□□□□ -1.2
USP48-206ENST00000464577 GPAT2Q6NUI2 795 aa7.57□□□□□ -1.2
USP48-206ENST00000464577 WDR75Q8IWA0 830 aaKnown RBP7.57□□□□□ -1.2
USP48-206ENST00000464577 RTKN2Q8IZC4 609 aa7.57□□□□□ -1.2
USP48-206ENST00000464577 MARVELD2Q8N4S9 558 aa7.57□□□□□ -1.2
USP48-206ENST00000464577 WDTC1Q8N5D0 677 aa7.57□□□□□ -1.2
USP48-206ENST00000464577 SLC25A41Q8N5S1 370 aa7.57□□□□□ -1.2
USP48-206ENST00000464577 PYDC1Q8WXC3 89 aa7.57□□□□□ -1.2
USP48-206ENST00000464577 IRGQQ8WZA9 623 aa7.57□□□□□ -1.2
USP48-206ENST00000464577 LENG1Q96BZ8 264 aaPredicted RBP7.57□□□□□ -1.2
USP48-206ENST00000464577 RTP4Q96DX8 246 aa7.57□□□□□ -1.2
USP48-206ENST00000464577 OCEL1Q9H607 264 aa7.57□□□□□ -1.2
USP48-206ENST00000464577 NRDE2Q9H7Z3 1164 aa7.57□□□□□ -1.2
USP48-206ENST00000464577 RSAD1Q9HA92 442 aa7.57□□□□□ -1.2
USP48-206ENST00000464577 DNAJC28Q9NX36 388 aa7.57□□□□□ -1.2
USP48-206ENST00000464577 ADAMTS6Q9UKP5 1117 aa7.57□□□□□ -1.2
USP48-206ENST00000464577 ARHGAP42A6NI28 874 aa7.56□□□□□ -1.2
USP48-206ENST00000464577 FAM159BA6NKW6 160 aa7.56□□□□□ -1.2
USP48-206ENST00000464577 MEI4A8MW99 385 aa7.56□□□□□ -1.2
USP48-206ENST00000464577 CXorf49A8MYA2 514 aaPredicted RBP7.56□□□□□ -1.2
USP48-206ENST00000464577 DENRO43583 198 aaKnown RBP7.56□□□□□ -1.2
USP48-206ENST00000464577 APOEP02649 317 aa7.56□□□□□ -1.2
USP48-206ENST00000464577 ITGA2BP08514 1039 aa7.56□□□□□ -1.2
USP48-206ENST00000464577 KRT3P12035 628 aa7.56□□□□□ -1.2
USP48-206ENST00000464577 ETS2P15036 469 aa7.56□□□□□ -1.2
USP48-206ENST00000464577 ALOX15P16050 662 aaPredicted RBP7.56□□□□□ -1.2
USP48-206ENST00000464577 EIF2AK2P19525 551 aaKnown RBP7.56□□□□□ -1.2
USP48-206ENST00000464577 OSBPP22059 807 aa7.56□□□□□ -1.2
USP48-206ENST00000464577 CNTFP26441 200 aa7.56□□□□□ -1.2
USP48-206ENST00000464577 PEX2P28328 305 aa7.56□□□□□ -1.2
USP48-206ENST00000464577 RFC1P35251 1148 aaPredicted RBP7.56□□□□□ -1.2
USP48-206ENST00000464577 RPL5P46777 297 aaKnown RBP7.56□□□□□ -1.2
USP48-206ENST00000464577 YWHAEP62258 255 aaKnown RBP7.56□□□□□ -1.2
USP48-206ENST00000464577 TFDP2Q14188 446 aa7.56□□□□□ -1.2
USP48-206ENST00000464577 SMTNL2Q2TAL5 461 aa7.56□□□□□ -1.2
USP48-206ENST00000464577 FAM47CQ5HY64 1035 aa7.56□□□□□ -1.2
USP48-206ENST00000464577 OGFRL1Q5TC84 451 aaPredicted RBP7.56□□□□□ -1.2
USP48-206ENST00000464577 CYP4A22Q5TCH4 519 aa7.56□□□□□ -1.2
USP48-206ENST00000464577 TMEM126BQ8IUX1 230 aa7.56□□□□□ -1.2
USP48-206ENST00000464577 CTAGE3PQ8IX95 158 aa7.56□□□□□ -1.2
USP48-206ENST00000464577 RBM12BQ8IXT5 1001 aaKnown RBP7.56□□□□□ -1.2
USP48-206ENST00000464577 MCUQ8NE86 351 aa7.56□□□□□ -1.2
USP48-206ENST00000464577 OR5B17Q8NGF7 314 aa7.56□□□□□ -1.2
USP48-206ENST00000464577 SPATA18Q8TC71 538 aa7.56□□□□□ -1.2
USP48-206ENST00000464577 SLC26A7Q8TE54 656 aa7.56□□□□□ -1.2
USP48-206ENST00000464577 FAF2Q96CS3 445 aa7.56□□□□□ -1.2
USP48-206ENST00000464577 GPRASP2Q96D09 838 aa7.56□□□□□ -1.2
USP48-206ENST00000464577 PRICKLE1Q96MT3 831 aaPredicted RBP7.56□□□□□ -1.2
USP48-206ENST00000464577 TAAR1Q96RJ0 339 aa7.56□□□□□ -1.2
USP48-206ENST00000464577 EBF4Q9BQW3 602 aa7.56□□□□□ -1.2
USP48-206ENST00000464577 PDCD2LQ9BRP1 358 aa7.56□□□□□ -1.2
USP48-206ENST00000464577 MSTO1Q9BUK6 570 aa7.56□□□□□ -1.2
USP48-206ENST00000464577 NIF3L1Q9GZT8 377 aa7.56□□□□□ -1.2
USP48-206ENST00000464577 HAPLN2Q9GZV7 340 aa7.56□□□□□ -1.2
USP48-206ENST00000464577 SDCBP2Q9H190 292 aa7.56□□□□□ -1.2
USP48-206ENST00000464577 LHX5Q9H2C1 402 aa7.56□□□□□ -1.2
USP48-206ENST00000464577 SCUBE2Q9NQ36 999 aa7.56□□□□□ -1.2
USP48-206ENST00000464577 CYP26B1Q9NR63 512 aa7.56□□□□□ -1.2
USP48-206ENST00000464577 CHCHD3Q9NX63 227 aaKnown RBP7.56□□□□□ -1.2
USP48-206ENST00000464577 LMCD1Q9NZU5 365 aa7.56□□□□□ -1.2
USP48-206ENST00000464577 GABBR1Q9UBS5 961 aa7.56□□□□□ -1.2
USP48-206ENST00000464577 MARCOQ9UEW3 520 aaPredicted RBP7.56□□□□□ -1.2
USP48-206ENST00000464577 ZC3H7BQ9UGR2 993 aaKnown RBP7.56□□□□□ -1.2
USP48-206ENST00000464577 CDH22Q9UJ99 828 aa7.56□□□□□ -1.2
USP48-206ENST00000464577 MAD1L1Q9Y6D9 718 aa7.56□□□□□ -1.2
USP48-206ENST00000464577 ADGRA2Q96PE1 1338 aa7.56□□□□□ -1.2
USP48-206ENST00000464577 COL11A2P13942 1736 aaPredicted RBP7.56□□□□□ -1.2
USP48-206ENST00000464577 SCN9AQ15858 1988 aa7.56□□□□□ -1.2
USP48-206ENST00000464577 C15orf38-AP3S2A0A0A6YYH1 394 aa7.56□□□□□ -1.2
USP48-206ENST00000464577 A6NJR5 290 aa7.56□□□□□ -1.2
USP48-206ENST00000464577 ENDOD1O94919 500 aa7.56□□□□□ -1.2
USP48-206ENST00000464577 ATG7O95352 703 aa7.56□□□□□ -1.2
USP48-206ENST00000464577 PSAPP07602 524 aa7.56□□□□□ -1.2
USP48-206ENST00000464577 CD48P09326 243 aa7.56□□□□□ -1.2
USP48-206ENST00000464577 SPATA31D3P0C874 917 aa7.56□□□□□ -1.2
USP48-206ENST00000464577 KITP10721 976 aa7.56□□□□□ -1.2
USP48-206ENST00000464577 ACAT1P24752 427 aaKnown RBP7.56□□□□□ -1.2
USP48-206ENST00000464577 GABRB2P47870 512 aa7.56□□□□□ -1.2
USP48-206ENST00000464577 SLC25A3Q00325 362 aa7.56□□□□□ -1.2
USP48-206ENST00000464577 DLG1Q12959 904 aa7.56□□□□□ -1.2
USP48-206ENST00000464577 SNAPC2Q13487 334 aa7.56□□□□□ -1.2
USP48-206ENST00000464577 MTM1Q13496 603 aa7.56□□□□□ -1.2
USP48-206ENST00000464577 MYBPC3Q14896 1274 aa7.56□□□□□ -1.2
USP48-206ENST00000464577 PTPN20Q4JDL3 420 aa7.56□□□□□ -1.2
USP48-206ENST00000464577 LPCAT4Q643R3 524 aa7.56□□□□□ -1.2
USP48-206ENST00000464577 MBLAC2Q68D91 279 aa7.56□□□□□ -1.2
USP48-206ENST00000464577 DARS2Q6PI48 645 aaKnown RBP7.56□□□□□ -1.2
USP48-206ENST00000464577 C4orf22Q6V702 233 aa7.56□□□□□ -1.2
USP48-206ENST00000464577 B3GNT6Q6ZMB0 384 aa7.56□□□□□ -1.2
USP48-206ENST00000464577 SPATA31D4Q6ZUB0 917 aa7.56□□□□□ -1.2
USP48-206ENST00000464577 ARPINQ7Z6K5 226 aa7.56□□□□□ -1.2
USP48-206ENST00000464577 SATL1Q86VE3 508 aa7.56□□□□□ -1.2
USP48-206ENST00000464577 WDR49Q8IV35 697 aa7.56□□□□□ -1.2
USP48-206ENST00000464577 BRSK2Q8IWQ3 736 aa7.56□□□□□ -1.2
USP48-206ENST00000464577 TAB3Q8N5C8 712 aaPredicted RBP7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms