RNA–Protein interactions for RNA: ENST00000464572.5

SUPT20H-204, Transcript of SPT20 homolog, SAGA complex component, humanhuman

TSL 1 (best)

Gene SUPT20H, Length 2,948 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT20H-204ENST00000464572 ZNF334Q9HCZ1 680 aaPredicted RBP13.36□□□□□ -0.27
SUPT20H-204ENST00000464572 ABCC13Q9NSE7 274 aa13.36□□□□□ -0.27
SUPT20H-204ENST00000464572 IP6K2Q9UHH9 426 aa13.36□□□□□ -0.27
SUPT20H-204ENST00000464572 MTCH2Q9Y6C9 303 aa13.36□□□□□ -0.27
SUPT20H-204ENST00000464572 CCDC195A0A1B0GUA6 201 aa13.36□□□□□ -0.27
SUPT20H-204ENST00000464572 HNRNPA1P09651 372 aaKnown RBP eCLIP13.36□□□□□ -0.27
SUPT20H-204ENST00000464572 ZNF143P52747 638 aaPredicted RBP13.36□□□□□ -0.27
SUPT20H-204ENST00000464572 GNG11P61952 73 aa13.36□□□□□ -0.27
SUPT20H-204ENST00000464572 ATP11AP98196 1134 aa13.36□□□□□ -0.27
SUPT20H-204ENST00000464572 HS6ST3Q8IZP7 471 aa13.36□□□□□ -0.27
SUPT20H-204ENST00000464572 ARHGAP18Q8N392 663 aa13.36□□□□□ -0.27
SUPT20H-204ENST00000464572 C12orf76Q8N812 135 aaPredicted RBP13.36□□□□□ -0.27
SUPT20H-204ENST00000464572 FNIP1Q8TF40 1166 aa13.36□□□□□ -0.27
SUPT20H-204ENST00000464572 CALR3Q96L12 384 aaKnown RBP13.36□□□□□ -0.27
SUPT20H-204ENST00000464572 ALS2CR12Q96Q35 445 aa13.36□□□□□ -0.27
SUPT20H-204ENST00000464572 CORO1BQ9BR76 489 aa13.36□□□□□ -0.27
SUPT20H-204ENST00000464572 DDX23Q9BUQ8 820 aaKnown RBP13.36□□□□□ -0.27
SUPT20H-204ENST00000464572 HCFC1R1Q9NWW0 138 aa13.36□□□□□ -0.27
SUPT20H-204ENST00000464572 ZDHHC7Q9NXF8 308 aa13.36□□□□□ -0.27
SUPT20H-204ENST00000464572 UXTQ9UBK9 157 aaPredicted RBP13.36□□□□□ -0.27
SUPT20H-204ENST00000464572 NUDT5Q9UKK9 219 aa13.36□□□□□ -0.27
SUPT20H-204ENST00000464572 HYOU1Q9Y4L1 999 aa13.36□□□□□ -0.27
SUPT20H-204ENST00000464572 SDC4P31431 198 aa13.35□□□□□ -0.27
SUPT20H-204ENST00000464572 NOS2P35228 1153 aa13.35□□□□□ -0.27
SUPT20H-204ENST00000464572 CDO1Q16878 200 aa13.35□□□□□ -0.27
SUPT20H-204ENST00000464572 C15orf59Q2T9L4 293 aaPredicted RBP13.35□□□□□ -0.27
SUPT20H-204ENST00000464572 CCDC14Q49A88 953 aa13.35□□□□□ -0.27
SUPT20H-204ENST00000464572 DAB2IPQ5VWQ8 1189 aa13.35□□□□□ -0.27
SUPT20H-204ENST00000464572 LRRC57Q8N9N7 239 aa13.35□□□□□ -0.27
SUPT20H-204ENST00000464572 TRIM58Q8NG06 486 aa13.35□□□□□ -0.27
SUPT20H-204ENST00000464572 ALG6Q9Y672 507 aa13.35□□□□□ -0.27
SUPT20H-204ENST00000464572 LINC01565O15544 149 aa13.35□□□□□ -0.27
SUPT20H-204ENST00000464572 XYLBO75191 536 aa13.35□□□□□ -0.27
SUPT20H-204ENST00000464572 PROSCO94903 275 aa13.35□□□□□ -0.27
SUPT20H-204ENST00000464572 GLP2RO95838 553 aa13.35□□□□□ -0.27
SUPT20H-204ENST00000464572 ZDHHC11BP0C7U3 371 aa13.35□□□□□ -0.27
SUPT20H-204ENST00000464572 TFE3P19532 575 aaPredicted RBP13.35□□□□□ -0.27
SUPT20H-204ENST00000464572 PSEN1P49768 467 aa13.35□□□□□ -0.27
SUPT20H-204ENST00000464572 PIGHQ14442 188 aaPredicted RBP13.35□□□□□ -0.27
SUPT20H-204ENST00000464572 SH3PXD2AQ5TCZ1 1133 aa13.35□□□□□ -0.27
SUPT20H-204ENST00000464572 CPNE8Q86YQ8 564 aa13.35□□□□□ -0.27
SUPT20H-204ENST00000464572 EFHBQ8N7U6 833 aa13.35□□□□□ -0.27
SUPT20H-204ENST00000464572 PDZD8Q8NEN9 1154 aa13.35□□□□□ -0.27
SUPT20H-204ENST00000464572 OVCA2Q8WZ82 227 aa13.35□□□□□ -0.27
SUPT20H-204ENST00000464572 CASP10Q92851 521 aa13.35□□□□□ -0.27
SUPT20H-204ENST00000464572 CNPY3Q9BT09 278 aa13.35□□□□□ -0.27
SUPT20H-204ENST00000464572 TRIM62Q9BVG3 475 aa13.35□□□□□ -0.27
SUPT20H-204ENST00000464572 PRKD2Q9BZL6 878 aa13.35□□□□□ -0.27
SUPT20H-204ENST00000464572 TRPM5Q9NZQ8 1165 aa13.35□□□□□ -0.27
SUPT20H-204ENST00000464572 USTQ9Y2C2 406 aa13.35□□□□□ -0.27
SUPT20H-204ENST00000464572 ZNF840PA6NDX5 716 aa13.34□□□□□ -0.27
SUPT20H-204ENST00000464572 PITX1P78337 314 aaPredicted RBP13.34□□□□□ -0.27
SUPT20H-204ENST00000464572 TMC5Q6UXY8 1006 aa13.34□□□□□ -0.27
SUPT20H-204ENST00000464572 NYAP1Q6ZVC0 841 aa13.34□□□□□ -0.27
SUPT20H-204ENST00000464572 RSRC2Q7L4I2 434 aaKnown RBP13.34□□□□□ -0.27
SUPT20H-204ENST00000464572 TMEM150AQ86TG1 271 aa13.34□□□□□ -0.27
SUPT20H-204ENST00000464572 TMC8Q8IU68 726 aa13.34□□□□□ -0.27
SUPT20H-204ENST00000464572 SLC35F6Q8N357 371 aa13.34□□□□□ -0.27
SUPT20H-204ENST00000464572 LRRC3Q9BY71 257 aa13.34□□□□□ -0.27
SUPT20H-204ENST00000464572 IL21Q9HBE4 155 aa13.34□□□□□ -0.27
SUPT20H-204ENST00000464572 ASAH2Q9NR71 780 aa13.34□□□□□ -0.27
SUPT20H-204ENST00000464572 STAP1Q9ULZ2 295 aa13.34□□□□□ -0.27
SUPT20H-204ENST00000464572 TADA3O75528 432 aa13.34□□□□□ -0.27
SUPT20H-204ENST00000464572 FTCDO95954 541 aa13.34□□□□□ -0.27
SUPT20H-204ENST00000464572 F11P03951 625 aa13.34□□□□□ -0.27
SUPT20H-204ENST00000464572 RARGP13631 454 aa13.34□□□□□ -0.27
SUPT20H-204ENST00000464572 PTPN2P17706 415 aa13.34□□□□□ -0.27
SUPT20H-204ENST00000464572 COMTP21964 271 aa13.34□□□□□ -0.27
SUPT20H-204ENST00000464572 GABRR2P28476 465 aa13.34□□□□□ -0.27
SUPT20H-204ENST00000464572 SLC25A52Q3SY17 297 aa13.34□□□□□ -0.27
SUPT20H-204ENST00000464572 C11orf63Q6NUN7 778 aa13.34□□□□□ -0.27
SUPT20H-204ENST00000464572 BEND5Q7L4P6 421 aa13.34□□□□□ -0.27
SUPT20H-204ENST00000464572 SYCE1Q8N0S2 351 aa13.34□□□□□ -0.27
SUPT20H-204ENST00000464572 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.34□□□□□ -0.27
SUPT20H-204ENST00000464572 ADAM32Q8TC27 787 aa13.34□□□□□ -0.27
SUPT20H-204ENST00000464572 RNF139Q8WU17 664 aa13.34□□□□□ -0.27
SUPT20H-204ENST00000464572 ZNF707Q96C28 371 aaPredicted RBP13.34□□□□□ -0.27
SUPT20H-204ENST00000464572 DOCK6Q96HP0 2047 aa13.34□□□□□ -0.27
SUPT20H-204ENST00000464572 TBCBQ99426 244 aa13.34□□□□□ -0.27
SUPT20H-204ENST00000464572 ADAM33Q9BZ11 813 aa13.34□□□□□ -0.27
SUPT20H-204ENST00000464572 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.34□□□□□ -0.27
SUPT20H-204ENST00000464572 CLIC5Q9NZA1 410 aa13.34□□□□□ -0.27
SUPT20H-204ENST00000464572 DNMT3BQ9UBC3 853 aaKnown RBP13.34□□□□□ -0.27
SUPT20H-204ENST00000464572 DPYSL4O14531 572 aa13.33□□□□□ -0.27
SUPT20H-204ENST00000464572 TBX18O95935 607 aa13.33□□□□□ -0.27
SUPT20H-204ENST00000464572 RALAP11233 206 aa13.33□□□□□ -0.27
SUPT20H-204ENST00000464572 MYL4P12829 197 aa13.33□□□□□ -0.27
SUPT20H-204ENST00000464572 PTPN9P43378 593 aa13.33□□□□□ -0.27
SUPT20H-204ENST00000464572 SULT1E1P49888 294 aa13.33□□□□□ -0.27
SUPT20H-204ENST00000464572 PABPC1LQ4VXU2 614 aaKnown RBP13.33□□□□□ -0.27
SUPT20H-204ENST00000464572 RAB6CQ53S08 254 aa13.33□□□□□ -0.27
SUPT20H-204ENST00000464572 GAREM2Q75VX8 874 aa13.33□□□□□ -0.27
SUPT20H-204ENST00000464572 SLFN11Q7Z7L1 901 aa13.33□□□□□ -0.27
SUPT20H-204ENST00000464572 NIPA2Q8N8Q9 360 aa13.33□□□□□ -0.27
SUPT20H-204ENST00000464572 WDR24Q96S15 920 aa13.33□□□□□ -0.27
SUPT20H-204ENST00000464572 NPY6RQ99463 290 aa13.33□□□□□ -0.27
SUPT20H-204ENST00000464572 GAS2L1Q99501 681 aaPredicted RBP13.33□□□□□ -0.27
SUPT20H-204ENST00000464572 RAB6CQ9H0N0 254 aa13.33□□□□□ -0.27
SUPT20H-204ENST00000464572 CCSER2Q9H7U1 834 aa13.33□□□□□ -0.27
SUPT20H-204ENST00000464572 SFXN1Q9H9B4 322 aa13.33□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms