RNA–Protein interactions for RNA: ENST00000464408.3

ALMS1-202, Transcript of ALMS1, centrosome and basal body associated protein, humanhuman

TSL 5

Gene ALMS1, Length 640 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1-202ENST00000464408 MAPK13O15264 365 aa15.32■□□□□ 0.04
ALMS1-202ENST00000464408 FOXD2O60548 495 aaPredicted RBP15.32■□□□□ 0.04
ALMS1-202ENST00000464408 RHOBTB1O94844 696 aa15.32■□□□□ 0.04
ALMS1-202ENST00000464408 CAVIN2O95810 425 aa15.32■□□□□ 0.04
ALMS1-202ENST00000464408 GRIA2P42262 883 aa15.32■□□□□ 0.04
ALMS1-202ENST00000464408 GAD2Q05329 585 aa15.32■□□□□ 0.04
ALMS1-202ENST00000464408 ZCWPW2Q504Y3 356 aa15.32■□□□□ 0.04
ALMS1-202ENST00000464408 USP39Q53GS9 565 aaKnown RBP15.32■□□□□ 0.04
ALMS1-202ENST00000464408 MIB1Q86YT6 1006 aa15.32■□□□□ 0.04
ALMS1-202ENST00000464408 CCDC26Q8TAB7 109 aa15.32■□□□□ 0.04
ALMS1-202ENST00000464408 OLIG1Q8TAK6 271 aa15.32■□□□□ 0.04
ALMS1-202ENST00000464408 SEMA4DQ92854 862 aa15.32■□□□□ 0.04
ALMS1-202ENST00000464408 CYFIP2Q96F07 1278 aa15.32■□□□□ 0.04
ALMS1-202ENST00000464408 P2RY11Q96G91 374 aa15.32■□□□□ 0.04
ALMS1-202ENST00000464408 HNRNPABQ99729 332 aaKnown RBP15.32■□□□□ 0.04
ALMS1-202ENST00000464408 SPHK2Q9NRA0 654 aa15.32■□□□□ 0.04
ALMS1-202ENST00000464408 CIZ1Q9ULV3 898 aaPredicted RBP15.32■□□□□ 0.04
ALMS1-202ENST00000464408 HOXC11O43248 304 aaPredicted RBP15.31■□□□□ 0.04
ALMS1-202ENST00000464408 CILPO75339 1184 aa15.31■□□□□ 0.04
ALMS1-202ENST00000464408 ZNF202O95125 648 aa15.31■□□□□ 0.04
ALMS1-202ENST00000464408 ACO1P21399 889 aaKnown RBP15.31■□□□□ 0.04
ALMS1-202ENST00000464408 TNFRSF4P43489 277 aa15.31■□□□□ 0.04
ALMS1-202ENST00000464408 NFIL3Q16649 462 aa15.31■□□□□ 0.04
ALMS1-202ENST00000464408 ZNF394Q53GI3 561 aa15.31■□□□□ 0.04
ALMS1-202ENST00000464408 RNF43Q68DV7 783 aa15.31■□□□□ 0.04
ALMS1-202ENST00000464408 INTS8Q75QN2 995 aaKnown RBP15.31■□□□□ 0.04
ALMS1-202ENST00000464408 GUF1Q8N442 669 aaKnown RBP15.31■□□□□ 0.04
ALMS1-202ENST00000464408 HMGB4Q8WW32 186 aa15.31■□□□□ 0.04
ALMS1-202ENST00000464408 OTUB2Q96DC9 234 aa15.31■□□□□ 0.04
ALMS1-202ENST00000464408 ARID3AQ99856 593 aa15.31■□□□□ 0.04
ALMS1-202ENST00000464408 NT5C1AQ9BXI3 368 aa15.31■□□□□ 0.04
ALMS1-202ENST00000464408 NIF3L1Q9GZT8 377 aa15.31■□□□□ 0.04
ALMS1-202ENST00000464408 FBXO44Q9H4M3 255 aa15.31■□□□□ 0.04
ALMS1-202ENST00000464408 TLR8Q9NR97 1041 aaKnown RBP15.31■□□□□ 0.04
ALMS1-202ENST00000464408 MBD1Q9UIS9 605 aaPredicted RBP15.31■□□□□ 0.04
ALMS1-202ENST00000464408 SCML2Q9UQR0 700 aa15.31■□□□□ 0.04
ALMS1-202ENST00000464408 CEP295Q9C0D2 2601 aa15.31■□□□□ 0.04
ALMS1-202ENST00000464408 USP24Q9UPU5 2620 aa15.31■□□□□ 0.04
ALMS1-202ENST00000464408 ADAMTS9Q9P2N4 1935 aa15.31■□□□□ 0.04
ALMS1-202ENST00000464408 ASCC3Q8N3C0 2202 aaKnown RBP15.31■□□□□ 0.04
ALMS1-202ENST00000464408 A0A1W2PQ27 194 aa15.3■□□□□ 0.04
ALMS1-202ENST00000464408 A0A1W2PQ64 194 aa15.3■□□□□ 0.04
ALMS1-202ENST00000464408 A0A1W2PQD8 194 aa15.3■□□□□ 0.04
ALMS1-202ENST00000464408 TCRBV21S2A2A0A5A6 115 aa15.3■□□□□ 0.04
ALMS1-202ENST00000464408 LNP1A1A4G5 178 aa15.3■□□□□ 0.04
ALMS1-202ENST00000464408 TBC1D3BA6NDS4 549 aa15.3■□□□□ 0.04
ALMS1-202ENST00000464408 PALM2-AKAP2B1ALY0 433 aaPredicted RBP15.3■□□□□ 0.04
ALMS1-202ENST00000464408 PSMC2P35998 433 aaKnown RBP15.3■□□□□ 0.04
ALMS1-202ENST00000464408 WASP42768 502 aa15.3■□□□□ 0.04
ALMS1-202ENST00000464408 DHPSP49366 369 aaPredicted RBP15.3■□□□□ 0.04
ALMS1-202ENST00000464408 ADAM9Q13443 819 aa15.3■□□□□ 0.04
ALMS1-202ENST00000464408 PNOCQ13519 176 aa15.3■□□□□ 0.04
ALMS1-202ENST00000464408 C10orf76Q5T2E6 689 aa15.3■□□□□ 0.04
ALMS1-202ENST00000464408 PPP1R26Q5T8A7 1209 aaPredicted RBP15.3■□□□□ 0.04
ALMS1-202ENST00000464408 N4BP2L1Q5TBK1 243 aaPredicted RBP15.3■□□□□ 0.04
ALMS1-202ENST00000464408 TPGS1Q6ZTW0 290 aa15.3■□□□□ 0.04
ALMS1-202ENST00000464408 HTR3DQ70Z44 454 aa15.3■□□□□ 0.04
ALMS1-202ENST00000464408 ARMCX6Q7L4S7 300 aa15.3■□□□□ 0.04
ALMS1-202ENST00000464408 SCD5Q86SK9 330 aa15.3■□□□□ 0.04
ALMS1-202ENST00000464408 TERB1Q8NA31 727 aa15.3■□□□□ 0.04
ALMS1-202ENST00000464408 EDEM2Q9BV94 578 aa15.3■□□□□ 0.04
ALMS1-202ENST00000464408 IMPG2Q9BZV3 1241 aa15.3■□□□□ 0.04
ALMS1-202ENST00000464408 CYP3A43Q9HB55 503 aa15.3■□□□□ 0.04
ALMS1-202ENST00000464408 TMEM8AQ9HCN3 771 aa15.3■□□□□ 0.04
ALMS1-202ENST00000464408 CYLDQ9NQC7 956 aa15.3■□□□□ 0.04
ALMS1-202ENST00000464408 MTPAPQ9NVV4 582 aaKnown RBP eCLIP15.3■□□□□ 0.04
ALMS1-202ENST00000464408 BCCIPQ9P287 314 aaKnown RBP eCLIP15.3■□□□□ 0.04
ALMS1-202ENST00000464408 C4orf47A7E2U8 309 aa15.29■□□□□ 0.04
ALMS1-202ENST00000464408 NEDD8-MDP1E9PL57 170 aa15.29■□□□□ 0.04
ALMS1-202ENST00000464408 KIF20AO95235 890 aa15.29■□□□□ 0.04
ALMS1-202ENST00000464408 RARGP13631 454 aa15.29■□□□□ 0.04
ALMS1-202ENST00000464408 KRT13P13646 458 aa15.29■□□□□ 0.04
ALMS1-202ENST00000464408 ATP5C1P36542 298 aaKnown RBP15.29■□□□□ 0.04
ALMS1-202ENST00000464408 P2RY2P41231 377 aa15.29■□□□□ 0.04
ALMS1-202ENST00000464408 MAP7D1Q3KQU3 841 aa15.29■□□□□ 0.04
ALMS1-202ENST00000464408 EOGTQ5NDL2 527 aa15.29■□□□□ 0.04
ALMS1-202ENST00000464408 BTBD8Q5XKL5 378 aa15.29■□□□□ 0.04
ALMS1-202ENST00000464408 EGFLAMQ63HQ2 1017 aa15.29■□□□□ 0.04
ALMS1-202ENST00000464408 TOGARAM2Q6ZUX3 1019 aa15.29■□□□□ 0.04
ALMS1-202ENST00000464408 CYP2U1Q7Z449 544 aa15.29■□□□□ 0.04
ALMS1-202ENST00000464408 ZNF513Q8N8E2 541 aaPredicted RBP15.29■□□□□ 0.04
ALMS1-202ENST00000464408 BHMTQ93088 406 aa15.29■□□□□ 0.04
ALMS1-202ENST00000464408 CCDC47Q96A33 483 aaKnown RBP15.29■□□□□ 0.04
ALMS1-202ENST00000464408 ACOX2Q99424 681 aa15.29■□□□□ 0.04
ALMS1-202ENST00000464408 DUSP9Q99956 384 aaKnown RBP15.29■□□□□ 0.04
ALMS1-202ENST00000464408 DNAJC17Q9NVM6 304 aaKnown RBP15.29■□□□□ 0.04
ALMS1-202ENST00000464408 DEC1Q9P2X7 70 aa15.29■□□□□ 0.04
ALMS1-202ENST00000464408 ATXN2Q99700 1313 aaKnown RBP15.28■□□□□ 0.04
ALMS1-202ENST00000464408 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa15.28■□□□□ 0.04
ALMS1-202ENST00000464408 PRRT4C9JH25 899 aa15.28■□□□□ 0.04
ALMS1-202ENST00000464408 GIPC1O14908 333 aa15.28■□□□□ 0.04
ALMS1-202ENST00000464408 ALDH1A2O94788 518 aa15.28■□□□□ 0.04
ALMS1-202ENST00000464408 TYRP14679 529 aa15.28■□□□□ 0.04
ALMS1-202ENST00000464408 PTGER3P43115 390 aa15.28■□□□□ 0.04
ALMS1-202ENST00000464408 KIF11P52732 1056 aa15.28■□□□□ 0.04
ALMS1-202ENST00000464408 MCCD1P59942 119 aaPredicted RBP15.28■□□□□ 0.04
ALMS1-202ENST00000464408 HSF5Q4G112 596 aaPredicted RBP15.28■□□□□ 0.04
ALMS1-202ENST00000464408 C10orf120Q5SQS8 335 aa15.28■□□□□ 0.04
ALMS1-202ENST00000464408 GRAMD4Q6IC98 578 aa15.28■□□□□ 0.04
ALMS1-202ENST00000464408 Q6ZNB5 142 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms