RNA–Protein interactions for RNA: ENST00000463708.1

UQCRC1-205, Transcript of ubiquinol-cytochrome c reductase core protein 1, human

TSL 3

Gene UQCRC1, Length 739 nt, Biotype retained intron, Subcellular localisation Mitochondria, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UQCRC1-205	ENST00000463708	PRMT8	Q9NR22	394 aa	Predicted RBP	13.81	□□□□□ -0.2
UQCRC1-205	ENST00000463708	CNTN6	Q9UQ52	1028 aa		13.81	□□□□□ -0.2
UQCRC1-205	ENST00000463708	NFE2L3	Q9Y4A8	694 aa		13.81	□□□□□ -0.2
UQCRC1-205	ENST00000463708	RALGAPA1	Q6GYQ0	2036 aa		13.8	□□□□□ -0.2
UQCRC1-205	ENST00000463708	PROB1	E7EW31	1015 aa		13.8	□□□□□ -0.2
UQCRC1-205	ENST00000463708	SP9	P0CG40	484 aa		13.8	□□□□□ -0.2
UQCRC1-205	ENST00000463708	IRF1	P10914	325 aa		13.8	□□□□□ -0.2
UQCRC1-205	ENST00000463708	ADH5	P11766	374 aa		13.8	□□□□□ -0.2
UQCRC1-205	ENST00000463708	BRD2	P25440	801 aa	Known RBP	13.8	□□□□□ -0.2
UQCRC1-205	ENST00000463708	GNA15	P30679	374 aa		13.8	□□□□□ -0.2
UQCRC1-205	ENST00000463708	USP8	P40818	1118 aa		13.8	□□□□□ -0.2
UQCRC1-205	ENST00000463708	ACADSB	P45954	432 aa		13.8	□□□□□ -0.2
UQCRC1-205	ENST00000463708	CXCL12	P48061	93 aa		13.8	□□□□□ -0.2
UQCRC1-205	ENST00000463708	ZNF132	P52740	706 aa		13.8	□□□□□ -0.2
UQCRC1-205	ENST00000463708	SNX16	P57768	344 aa		13.8	□□□□□ -0.2
UQCRC1-205	ENST00000463708	BPIFB4	P59827	614 aa		13.8	□□□□□ -0.2
UQCRC1-205	ENST00000463708	YWHAG	P61981	247 aa	Known RBP eCLIP	13.8	□□□□□ -0.2
UQCRC1-205	ENST00000463708	GAD2	Q05329	585 aa		13.8	□□□□□ -0.2
UQCRC1-205	ENST00000463708	ADIG	Q0VDE8	80 aa		13.8	□□□□□ -0.2
UQCRC1-205	ENST00000463708	MTAP	Q13126	283 aa		13.8	□□□□□ -0.2
UQCRC1-205	ENST00000463708	CCIN	Q13939	588 aa		13.8	□□□□□ -0.2
UQCRC1-205	ENST00000463708	TCP11X2	Q5H9J9	407 aa		13.8	□□□□□ -0.2
UQCRC1-205	ENST00000463708	FKBP15	Q5T1M5	1219 aa		13.8	□□□□□ -0.2
UQCRC1-205	ENST00000463708	PM20D1	Q6GTS8	502 aa		13.8	□□□□□ -0.2
UQCRC1-205	ENST00000463708	TXNDC11	Q6PKC3	985 aa		13.8	□□□□□ -0.2
UQCRC1-205	ENST00000463708	IRF2BP1	Q8IU81	584 aa		13.8	□□□□□ -0.2
UQCRC1-205	ENST00000463708	ZNF687	Q8N1G0	1237 aa		13.8	□□□□□ -0.2
UQCRC1-205	ENST00000463708	RIN3	Q8TB24	985 aa		13.8	□□□□□ -0.2
UQCRC1-205	ENST00000463708	IRGQ	Q8WZA9	623 aa		13.8	□□□□□ -0.2
UQCRC1-205	ENST00000463708	NKD2	Q969F2	451 aa	Predicted RBP	13.8	□□□□□ -0.2
UQCRC1-205	ENST00000463708	KREMEN1	Q96MU8	473 aa		13.8	□□□□□ -0.2
UQCRC1-205	ENST00000463708	MED15	Q96RN5	788 aa		13.8	□□□□□ -0.2
UQCRC1-205	ENST00000463708	ULBP1	Q9BZM6	244 aa		13.8	□□□□□ -0.2
UQCRC1-205	ENST00000463708	FAM86C1	Q9NVL1	165 aa		13.8	□□□□□ -0.2
UQCRC1-205	ENST00000463708	RASAL2	Q9UJF2	1139 aa		13.8	□□□□□ -0.2
UQCRC1-205	ENST00000463708	DAAM1	Q9Y4D1	1078 aa		13.8	□□□□□ -0.2
UQCRC1-205	ENST00000463708	CEP83	Q9Y592	693 aa		13.8	□□□□□ -0.2
UQCRC1-205	ENST00000463708	PCDHGA2	Q9Y5H1	932 aa		13.8	□□□□□ -0.2
UQCRC1-205	ENST00000463708	WDFY4	Q6ZS81	3184 aa		13.8	□□□□□ -0.2
UQCRC1-205	ENST00000463708	SHISA7	A6NL88	538 aa		13.79	□□□□□ -0.2
UQCRC1-205	ENST00000463708	THAP12	O43422	761 aa		13.79	□□□□□ -0.2
UQCRC1-205	ENST00000463708	CYP17A1	P05093	508 aa		13.79	□□□□□ -0.2
UQCRC1-205	ENST00000463708	PON1	P27169	355 aa		13.79	□□□□□ -0.2
UQCRC1-205	ENST00000463708	MYL5	Q02045	173 aa		13.79	□□□□□ -0.2
UQCRC1-205	ENST00000463708	CSTF1	Q05048	431 aa	Known RBP	13.79	□□□□□ -0.2
UQCRC1-205	ENST00000463708	PTK2	Q05397	1052 aa		13.79	□□□□□ -0.2
UQCRC1-205	ENST00000463708	FZD5	Q13467	585 aa		13.79	□□□□□ -0.2
UQCRC1-205	ENST00000463708	DHCR24	Q15392	516 aa		13.79	□□□□□ -0.2
UQCRC1-205	ENST00000463708	ARHGAP44	Q17R89	818 aa		13.79	□□□□□ -0.2
UQCRC1-205	ENST00000463708	HTR3D	Q70Z44	454 aa		13.79	□□□□□ -0.2
UQCRC1-205	ENST00000463708	UBA3	Q8TBC4	463 aa		13.79	□□□□□ -0.2
UQCRC1-205	ENST00000463708	ATRIP	Q8WXE1	791 aa		13.79	□□□□□ -0.2
UQCRC1-205	ENST00000463708	SHC3	Q92529	594 aa		13.79	□□□□□ -0.2
UQCRC1-205	ENST00000463708	KAT5	Q92993	513 aa		13.79	□□□□□ -0.2
UQCRC1-205	ENST00000463708	SECISBP2L	Q93073	1101 aa	Known RBP	13.79	□□□□□ -0.2
UQCRC1-205	ENST00000463708	ZFR	Q96KR1	1074 aa	Known RBP	13.79	□□□□□ -0.2
UQCRC1-205	ENST00000463708	NOX5	Q96PH1	765 aa		13.79	□□□□□ -0.2
UQCRC1-205	ENST00000463708	KLF16	Q9BXK1	252 aa	Predicted RBP	13.79	□□□□□ -0.2
UQCRC1-205	ENST00000463708	NMUR1	Q9HB89	426 aa		13.79	□□□□□ -0.2
UQCRC1-205	ENST00000463708	ABCC13	Q9NSE7	274 aa		13.79	□□□□□ -0.2
UQCRC1-205	ENST00000463708	ZSCAN32	Q9NX65	697 aa		13.79	□□□□□ -0.2
UQCRC1-205	ENST00000463708	RIF1	Q5UIP0	2472 aa	Known RBP	13.79	□□□□□ -0.2
UQCRC1-205	ENST00000463708	LETM1	O95202	739 aa	Predicted RBP	13.78	□□□□□ -0.2
UQCRC1-205	ENST00000463708	PAPSS2	O95340	614 aa	Predicted RBP	13.78	□□□□□ -0.2
UQCRC1-205	ENST00000463708	APOD	P05090	189 aa		13.78	□□□□□ -0.2
UQCRC1-205	ENST00000463708	SLC9A1	P19634	815 aa		13.78	□□□□□ -0.2
UQCRC1-205	ENST00000463708	CHKA	P35790	457 aa		13.78	□□□□□ -0.2
UQCRC1-205	ENST00000463708	MRE11	P49959	708 aa		13.78	□□□□□ -0.2
UQCRC1-205	ENST00000463708	PKDCC	Q504Y2	493 aa		13.78	□□□□□ -0.2
UQCRC1-205	ENST00000463708	MIB1	Q86YT6	1006 aa		13.78	□□□□□ -0.2
UQCRC1-205	ENST00000463708	ADGRG2	Q8IZP9	1017 aa		13.78	□□□□□ -0.2
UQCRC1-205	ENST00000463708	STK32A	Q8WU08	396 aa		13.78	□□□□□ -0.2
UQCRC1-205	ENST00000463708	TFAP2B	Q92481	460 aa		13.78	□□□□□ -0.2
UQCRC1-205	ENST00000463708	PLD4	Q96BZ4	506 aa		13.78	□□□□□ -0.2
UQCRC1-205	ENST00000463708	XPO6	Q96QU8	1125 aa	Known RBP	13.78	□□□□□ -0.2
UQCRC1-205	ENST00000463708	LINC00597	Q9H2U6	94 aa		13.78	□□□□□ -0.2
UQCRC1-205	ENST00000463708	SPHK2	Q9NRA0	654 aa		13.78	□□□□□ -0.2
UQCRC1-205	ENST00000463708	MARCH2	Q9P0N8	246 aa		13.78	□□□□□ -0.2
UQCRC1-205	ENST00000463708	WDR35	Q9P2L0	1181 aa		13.78	□□□□□ -0.2
UQCRC1-205	ENST00000463708	OTOL1	A6NHN0	477 aa	Predicted RBP	13.77	□□□□□ -0.21
UQCRC1-205	ENST00000463708	RNF225	M0QZC1	329 aa	Predicted RBP	13.77	□□□□□ -0.21
UQCRC1-205	ENST00000463708	HOXC11	O43248	304 aa	Predicted RBP	13.77	□□□□□ -0.21
UQCRC1-205	ENST00000463708	LCP1	P13796	627 aa		13.77	□□□□□ -0.21
UQCRC1-205	ENST00000463708	HOXD11	P31277	338 aa	Predicted RBP	13.77	□□□□□ -0.21
UQCRC1-205	ENST00000463708	GALK1	P51570	392 aa		13.77	□□□□□ -0.21
UQCRC1-205	ENST00000463708	DAOA	P59103	153 aa		13.77	□□□□□ -0.21
UQCRC1-205	ENST00000463708	ZNF445	P59923	1031 aa		13.77	□□□□□ -0.21
UQCRC1-205	ENST00000463708	ZXDB	P98169	803 aa		13.77	□□□□□ -0.21
UQCRC1-205	ENST00000463708	EFEMP1	Q12805	493 aa		13.77	□□□□□ -0.21
UQCRC1-205	ENST00000463708	E2F5	Q15329	346 aa		13.77	□□□□□ -0.21
UQCRC1-205	ENST00000463708	HSF5	Q4G112	596 aa	Predicted RBP	13.77	□□□□□ -0.21
UQCRC1-205	ENST00000463708	HSP90AA4P	Q58FG1	418 aa		13.77	□□□□□ -0.21
UQCRC1-205	ENST00000463708	FSTL4	Q6MZW2	842 aa		13.77	□□□□□ -0.21
UQCRC1-205	ENST00000463708	SCD5	Q86SK9	330 aa		13.77	□□□□□ -0.21
UQCRC1-205	ENST00000463708	BBS7	Q8IWZ6	715 aa		13.77	□□□□□ -0.21
UQCRC1-205	ENST00000463708	SLC35F5	Q8WV83	523 aa		13.77	□□□□□ -0.21
UQCRC1-205	ENST00000463708	PNKP	Q96T60	521 aa		13.77	□□□□□ -0.21
UQCRC1-205	ENST00000463708	ST7	Q9NRC1	585 aa		13.77	□□□□□ -0.21
UQCRC1-205	ENST00000463708	SAMSN1	Q9NSI8	373 aa	Known RBP	13.77	□□□□□ -0.21
UQCRC1-205	ENST00000463708	RBM12	Q9NTZ6	932 aa	Known RBP	13.77	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms