RNA–Protein interactions for RNA: ENST00000463477.5

PTPRD-207, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 1,697 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-207ENST00000463477 HIDE1A8MVS5 230 aa10.37□□□□□ -0.75
PTPRD-207ENST00000463477 E7EVH7 732 aa10.37□□□□□ -0.75
PTPRD-207ENST00000463477 RASGRF2O14827 1237 aa10.37□□□□□ -0.75
PTPRD-207ENST00000463477 MEFVO15553 781 aaPredicted RBP10.37□□□□□ -0.75
PTPRD-207ENST00000463477 LILRB3O75022 631 aa10.37□□□□□ -0.75
PTPRD-207ENST00000463477 SOD2P04179 222 aa10.37□□□□□ -0.75
PTPRD-207ENST00000463477 HARSP12081 509 aaKnown RBP10.37□□□□□ -0.75
PTPRD-207ENST00000463477 ATF2P15336 505 aa10.37□□□□□ -0.75
PTPRD-207ENST00000463477 ATP5DP30049 168 aa10.37□□□□□ -0.75
PTPRD-207ENST00000463477 LTBRP36941 435 aa10.37□□□□□ -0.75
PTPRD-207ENST00000463477 NRIP1P48552 1158 aa10.37□□□□□ -0.75
PTPRD-207ENST00000463477 TFF2Q03403 129 aa10.37□□□□□ -0.75
PTPRD-207ENST00000463477 KCNC3Q14003 757 aa10.37□□□□□ -0.75
PTPRD-207ENST00000463477 DUSP6Q16828 381 aa10.37□□□□□ -0.75
PTPRD-207ENST00000463477 SEZ6Q53EL9 994 aa10.37□□□□□ -0.75
PTPRD-207ENST00000463477 PLPP4Q5VZY2 271 aa10.37□□□□□ -0.75
PTPRD-207ENST00000463477 C6orf89Q6UWU4 347 aa10.37□□□□□ -0.75
PTPRD-207ENST00000463477 TMEM184AQ6ZMB5 413 aa10.37□□□□□ -0.75
PTPRD-207ENST00000463477 TAOK1Q7L7X3 1001 aa10.37□□□□□ -0.75
PTPRD-207ENST00000463477 RBM23Q86U06 439 aaKnown RBP10.37□□□□□ -0.75
PTPRD-207ENST00000463477 PASD1Q8IV76 773 aa10.37□□□□□ -0.75
PTPRD-207ENST00000463477 IPO4Q8TEX9 1081 aaKnown RBP10.37□□□□□ -0.75
PTPRD-207ENST00000463477 RAPGEF5Q92565 580 aa10.37□□□□□ -0.75
PTPRD-207ENST00000463477 P3H4Q92791 437 aa10.37□□□□□ -0.75
PTPRD-207ENST00000463477 UROC1Q96N76 676 aa10.37□□□□□ -0.75
PTPRD-207ENST00000463477 ZMAT2Q96NC0 199 aaKnown RBP10.37□□□□□ -0.75
PTPRD-207ENST00000463477 FRMD8P1Q9BZ68 369 aaPredicted RBP10.37□□□□□ -0.75
PTPRD-207ENST00000463477 CDC42EP4Q9H3Q1 356 aaKnown RBP10.37□□□□□ -0.75
PTPRD-207ENST00000463477 IGFLR1Q9H665 355 aa10.37□□□□□ -0.75
PTPRD-207ENST00000463477 SSX2IPQ9Y2D8 614 aa10.37□□□□□ -0.75
PTPRD-207ENST00000463477 TRIP11Q15643 1979 aa10.36□□□□□ -0.75
PTPRD-207ENST00000463477 TMEM189-UBE2V1I3L0A0 370 aa10.36□□□□□ -0.75
PTPRD-207ENST00000463477 PER2O15055 1255 aa10.36□□□□□ -0.75
PTPRD-207ENST00000463477 MED7O43513 233 aa10.36□□□□□ -0.75
PTPRD-207ENST00000463477 TADA2AO75478 443 aa10.36□□□□□ -0.75
PTPRD-207ENST00000463477 TJP3O95049 919 aa10.36□□□□□ -0.75
PTPRD-207ENST00000463477 CSPG5O95196 566 aa10.36□□□□□ -0.75
PTPRD-207ENST00000463477 TTC4O95801 387 aa10.36□□□□□ -0.75
PTPRD-207ENST00000463477 ABHD2P08910 425 aa10.36□□□□□ -0.75
PTPRD-207ENST00000463477 KLRC2P26717 231 aa10.36□□□□□ -0.75
PTPRD-207ENST00000463477 POLR2BP30876 1174 aaKnown RBP10.36□□□□□ -0.75
PTPRD-207ENST00000463477 ASPAP45381 313 aa10.36□□□□□ -0.75
PTPRD-207ENST00000463477 AUHQ13825 339 aaKnown RBP10.36□□□□□ -0.75
PTPRD-207ENST00000463477 ZBTB6Q15916 424 aa10.36□□□□□ -0.75
PTPRD-207ENST00000463477 UPP1Q16831 310 aa10.36□□□□□ -0.75
PTPRD-207ENST00000463477 ZNF699Q32M78 642 aa10.36□□□□□ -0.75
PTPRD-207ENST00000463477 LEXMQ3ZCV2 418 aa10.36□□□□□ -0.75
PTPRD-207ENST00000463477 TJAP1Q5JTD0 557 aa10.36□□□□□ -0.75
PTPRD-207ENST00000463477 GLRA4Q5JXX5 417 aa10.36□□□□□ -0.75
PTPRD-207ENST00000463477 KIAA0319Q5VV43 1072 aa10.36□□□□□ -0.75
PTPRD-207ENST00000463477 LLGL2Q6P1M3 1020 aa10.36□□□□□ -0.75
PTPRD-207ENST00000463477 DNAJC24Q6P3W2 148 aa10.36□□□□□ -0.75
PTPRD-207ENST00000463477 DCLRE1AQ6PJP8 1040 aa10.36□□□□□ -0.75
PTPRD-207ENST00000463477 TAS1R1Q7RTX1 841 aa10.36□□□□□ -0.75
PTPRD-207ENST00000463477 TADA2BQ86TJ2 420 aa10.36□□□□□ -0.75
PTPRD-207ENST00000463477 CCDC50Q8IVM0 306 aa10.36□□□□□ -0.75
PTPRD-207ENST00000463477 C10orf67Q8IYJ2 551 aa10.36□□□□□ -0.75
PTPRD-207ENST00000463477 SLITRK1Q96PX8 696 aa10.36□□□□□ -0.75
PTPRD-207ENST00000463477 XPO6Q96QU8 1125 aaKnown RBP10.36□□□□□ -0.75
PTPRD-207ENST00000463477 PAAF1Q9BRP4 392 aa10.36□□□□□ -0.75
PTPRD-207ENST00000463477 GPR62Q9BZJ7 368 aa10.36□□□□□ -0.75
PTPRD-207ENST00000463477 PHACTR1Q9C0D0 580 aa10.36□□□□□ -0.75
PTPRD-207ENST00000463477 ADAM7Q9H2U9 754 aa10.36□□□□□ -0.75
PTPRD-207ENST00000463477 RPF1Q9H9Y2 349 aaKnown RBP10.36□□□□□ -0.75
PTPRD-207ENST00000463477 LRRC4CQ9HCJ2 640 aa10.36□□□□□ -0.75
PTPRD-207ENST00000463477 CLDND1Q9NY35 253 aa10.36□□□□□ -0.75
PTPRD-207ENST00000463477 WDR35Q9P2L0 1181 aa10.36□□□□□ -0.75
PTPRD-207ENST00000463477 R3HDM2Q9Y2K5 976 aaKnown RBP10.36□□□□□ -0.75
PTPRD-207ENST00000463477 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.36□□□□□ -0.75
PTPRD-207ENST00000463477 TTC28Q96AY4 2481 aa10.36□□□□□ -0.75
PTPRD-207ENST00000463477 NCOR1O75376 2440 aa10.35□□□□□ -0.75
PTPRD-207ENST00000463477 CASTOR2A6NHX0 329 aa10.35□□□□□ -0.75
PTPRD-207ENST00000463477 F8W810 466 aa10.35□□□□□ -0.75
PTPRD-207ENST00000463477 TRIM66O15016 1216 aa10.35□□□□□ -0.75
PTPRD-207ENST00000463477 KIAA0754O94854 1291 aa10.35□□□□□ -0.75
PTPRD-207ENST00000463477 STAU1O95793 577 aaKnown RBP10.35□□□□□ -0.75
PTPRD-207ENST00000463477 WEE2P0C1S8 567 aa10.35□□□□□ -0.75
PTPRD-207ENST00000463477 CXCL8P10145 99 aa10.35□□□□□ -0.75
PTPRD-207ENST00000463477 BMP1P13497 986 aa10.35□□□□□ -0.75
PTPRD-207ENST00000463477 CYP3A5P20815 502 aa10.35□□□□□ -0.75
PTPRD-207ENST00000463477 KCNA5P22460 613 aa10.35□□□□□ -0.75
PTPRD-207ENST00000463477 ATICP31939 592 aa10.35□□□□□ -0.75
PTPRD-207ENST00000463477 RPL9P32969 192 aaKnown RBP10.35□□□□□ -0.75
PTPRD-207ENST00000463477 ITGA8P53708 1063 aa10.35□□□□□ -0.75
PTPRD-207ENST00000463477 SEC24CP53992 1094 aa10.35□□□□□ -0.75
PTPRD-207ENST00000463477 DSG1Q02413 1049 aa10.35□□□□□ -0.75
PTPRD-207ENST00000463477 SOX4Q06945 474 aaPredicted RBP10.35□□□□□ -0.75
PTPRD-207ENST00000463477 ZNF252P-AS1Q0IIN9 211 aa10.35□□□□□ -0.75
PTPRD-207ENST00000463477 SNX1Q13596 522 aa10.35□□□□□ -0.75
PTPRD-207ENST00000463477 USP41Q3LFD5 358 aa10.35□□□□□ -0.75
PTPRD-207ENST00000463477 FUT10Q6P4F1 479 aa10.35□□□□□ -0.75
PTPRD-207ENST00000463477 NT5DC4Q86YG4 428 aa10.35□□□□□ -0.75
PTPRD-207ENST00000463477 TTC39CQ8N584 583 aa10.35□□□□□ -0.75
PTPRD-207ENST00000463477 WDTC1Q8N5D0 677 aa10.35□□□□□ -0.75
PTPRD-207ENST00000463477 ATG4AQ8WYN0 398 aa10.35□□□□□ -0.75
PTPRD-207ENST00000463477 NKD2Q969F2 451 aaPredicted RBP10.35□□□□□ -0.75
PTPRD-207ENST00000463477 ASB7Q9H672 318 aa10.35□□□□□ -0.75
PTPRD-207ENST00000463477 CYP3A43Q9HB55 503 aa10.35□□□□□ -0.75
PTPRD-207ENST00000463477 MRPL17Q9NRX2 175 aaKnown RBP10.35□□□□□ -0.75
PTPRD-207ENST00000463477 LGALS13Q9UHV8 139 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms