RNA–Protein interactions for RNA: ENST00000463370.5

VAPB-203, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 2,393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-203ENST00000463370 PRCCQ92733 491 aaPredicted RBP13.36□□□□□ -0.27
VAPB-203ENST00000463370 PGM2Q96G03 612 aa13.36□□□□□ -0.27
VAPB-203ENST00000463370 TMEM209Q96SK2 561 aa13.36□□□□□ -0.27
VAPB-203ENST00000463370 MFHAS1Q9Y4C4 1052 aa13.36□□□□□ -0.27
VAPB-203ENST00000463370 HEY1Q9Y5J3 304 aa13.36□□□□□ -0.27
VAPB-203ENST00000463370 SYNJ2BP-COX16A0A087WUM0 186 aa13.35□□□□□ -0.27
VAPB-203ENST00000463370 AP1G2O75843 785 aa13.35□□□□□ -0.27
VAPB-203ENST00000463370 FAM200BP0CF97 657 aa13.35□□□□□ -0.27
VAPB-203ENST00000463370 RPL9P32969 192 aaKnown RBP13.35□□□□□ -0.27
VAPB-203ENST00000463370 SCNN1AP37088 669 aa13.35□□□□□ -0.27
VAPB-203ENST00000463370 MATKP42679 507 aa13.35□□□□□ -0.27
VAPB-203ENST00000463370 LHX1P48742 406 aa13.35□□□□□ -0.27
VAPB-203ENST00000463370 RAB27AP51159 221 aa13.35□□□□□ -0.27
VAPB-203ENST00000463370 TKTL1P51854 596 aa13.35□□□□□ -0.27
VAPB-203ENST00000463370 PDK2Q15119 407 aa13.35□□□□□ -0.27
VAPB-203ENST00000463370 CCDC38Q502W7 563 aa13.35□□□□□ -0.27
VAPB-203ENST00000463370 SYCP2LQ5T4T6 812 aa13.35□□□□□ -0.27
VAPB-203ENST00000463370 ARCQ7LC44 396 aa13.35□□□□□ -0.27
VAPB-203ENST00000463370 ECHDC2Q86YB7 292 aa13.35□□□□□ -0.27
VAPB-203ENST00000463370 TMEM86AQ8N2M4 240 aa13.35□□□□□ -0.27
VAPB-203ENST00000463370 MDM1Q8TC05 714 aa13.35□□□□□ -0.27
VAPB-203ENST00000463370 P3H4Q92791 437 aa13.35□□□□□ -0.27
VAPB-203ENST00000463370 GLT1D1Q96MS3 346 aa13.35□□□□□ -0.27
VAPB-203ENST00000463370 KCTD15Q96SI1 283 aaPredicted RBP13.35□□□□□ -0.27
VAPB-203ENST00000463370 TMEM109Q9BVC6 243 aa13.35□□□□□ -0.27
VAPB-203ENST00000463370 DHX35Q9H5Z1 703 aaKnown RBP13.35□□□□□ -0.27
VAPB-203ENST00000463370 SAYSD1Q9NPB0 183 aa13.35□□□□□ -0.27
VAPB-203ENST00000463370 TMLHEQ9NVH6 421 aa13.35□□□□□ -0.27
VAPB-203ENST00000463370 COX16Q9P0S2 106 aa13.35□□□□□ -0.27
VAPB-203ENST00000463370 CASP8AP2Q9UKL3 1982 aa13.35□□□□□ -0.27
VAPB-203ENST00000463370 A0A1W2PQ45 241 aaPredicted RBP13.35□□□□□ -0.27
VAPB-203ENST00000463370 A0A1W2PQY0 241 aa13.35□□□□□ -0.27
VAPB-203ENST00000463370 RASGRF2O14827 1237 aa13.35□□□□□ -0.27
VAPB-203ENST00000463370 RPLP2P05387 115 aaKnown RBP13.35□□□□□ -0.27
VAPB-203ENST00000463370 FYNP06241 537 aa13.35□□□□□ -0.27
VAPB-203ENST00000463370 MDH1P40925 334 aaKnown RBP13.35□□□□□ -0.27
VAPB-203ENST00000463370 MAGEA4P43358 317 aa13.35□□□□□ -0.27
VAPB-203ENST00000463370 SULT1E1P49888 294 aa13.35□□□□□ -0.27
VAPB-203ENST00000463370 HNRNPH2P55795 449 aaKnown RBP13.35□□□□□ -0.27
VAPB-203ENST00000463370 PPP2R2AP63151 447 aa13.35□□□□□ -0.27
VAPB-203ENST00000463370 DPYSL2Q16555 572 aa13.35□□□□□ -0.27
VAPB-203ENST00000463370 SLC9A4Q6AI14 798 aa13.35□□□□□ -0.27
VAPB-203ENST00000463370 LEKR1Q6ZMV7 388 aa13.35□□□□□ -0.27
VAPB-203ENST00000463370 MYCBPAPQ8TBZ2 947 aa13.35□□□□□ -0.27
VAPB-203ENST00000463370 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.35□□□□□ -0.27
VAPB-203ENST00000463370 KCTD13Q8WZ19 329 aa13.35□□□□□ -0.27
VAPB-203ENST00000463370 FRMD8P1Q9BZ68 369 aaPredicted RBP13.35□□□□□ -0.27
VAPB-203ENST00000463370 ULBP1Q9BZM6 244 aa13.35□□□□□ -0.27
VAPB-203ENST00000463370 LRRC4Q9HBW1 653 aa13.35□□□□□ -0.27
VAPB-203ENST00000463370 AP4E1Q9UPM8 1137 aa13.35□□□□□ -0.27
VAPB-203ENST00000463370 YJEFN3A6XGL0 299 aa13.34□□□□□ -0.27
VAPB-203ENST00000463370 E7ENQ6 273 aa13.34□□□□□ -0.27
VAPB-203ENST00000463370 RGS16O15492 202 aaPredicted RBP13.34□□□□□ -0.27
VAPB-203ENST00000463370 CABYRO75952 493 aa13.34□□□□□ -0.27
VAPB-203ENST00000463370 TMEM63AO94886 807 aa13.34□□□□□ -0.27
VAPB-203ENST00000463370 FAM163BP0C2L3 166 aa13.34□□□□□ -0.27
VAPB-203ENST00000463370 CYP2F1P24903 491 aa13.34□□□□□ -0.27
VAPB-203ENST00000463370 HOXD10P28358 340 aa13.34□□□□□ -0.27
VAPB-203ENST00000463370 LSP1P33241 339 aa13.34□□□□□ -0.27
VAPB-203ENST00000463370 SLC8A3P57103 927 aa13.34□□□□□ -0.27
VAPB-203ENST00000463370 YWHAZP63104 245 aaKnown RBP13.34□□□□□ -0.27
VAPB-203ENST00000463370 ROR1Q01973 937 aa13.34□□□□□ -0.27
VAPB-203ENST00000463370 GBE1Q04446 702 aa13.34□□□□□ -0.27
VAPB-203ENST00000463370 SLC10A2Q12908 348 aaPredicted RBP13.34□□□□□ -0.27
VAPB-203ENST00000463370 TFDP2Q14188 446 aa13.34□□□□□ -0.27
VAPB-203ENST00000463370 MORF4L2Q15014 288 aa13.34□□□□□ -0.27
VAPB-203ENST00000463370 SLC25A52Q3SY17 297 aa13.34□□□□□ -0.27
VAPB-203ENST00000463370 MSS51Q4VC12 460 aa13.34□□□□□ -0.27
VAPB-203ENST00000463370 EFHC1Q5JVL4 640 aa13.34□□□□□ -0.27
VAPB-203ENST00000463370 DARS2Q6PI48 645 aaKnown RBP13.34□□□□□ -0.27
VAPB-203ENST00000463370 RELL1Q8IUW5 271 aa13.34□□□□□ -0.27
VAPB-203ENST00000463370 MAP7D3Q8IWC1 876 aa13.34□□□□□ -0.27
VAPB-203ENST00000463370 NETO2Q8NC67 525 aa13.34□□□□□ -0.27
VAPB-203ENST00000463370 OR10T2Q8NGX3 314 aa13.34□□□□□ -0.27
VAPB-203ENST00000463370 ADAM32Q8TC27 787 aa13.34□□□□□ -0.27
VAPB-203ENST00000463370 MYLPFQ96A32 169 aa13.34□□□□□ -0.27
VAPB-203ENST00000463370 FAF2Q96CS3 445 aa13.34□□□□□ -0.27
VAPB-203ENST00000463370 ZNF670Q9BS34 389 aa13.34□□□□□ -0.27
VAPB-203ENST00000463370 CFHR5Q9BXR6 569 aa13.34□□□□□ -0.27
VAPB-203ENST00000463370 USP29Q9HBJ7 922 aa13.34□□□□□ -0.27
VAPB-203ENST00000463370 ETNK2Q9NVF9 386 aa13.34□□□□□ -0.27
VAPB-203ENST00000463370 PRDM4Q9UKN5 801 aa13.34□□□□□ -0.27
VAPB-203ENST00000463370 NAALADL1Q9UQQ1 740 aa13.34□□□□□ -0.27
VAPB-203ENST00000463370 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.34□□□□□ -0.27
VAPB-203ENST00000463370 HHLA1C9JL84 531 aa13.34□□□□□ -0.27
VAPB-203ENST00000463370 APOL1O14791 398 aa13.34□□□□□ -0.27
VAPB-203ENST00000463370 AMHP03971 560 aa13.34□□□□□ -0.27
VAPB-203ENST00000463370 BCAR1P56945 870 aa13.34□□□□□ -0.27
VAPB-203ENST00000463370 GRIK3Q13003 919 aa13.34□□□□□ -0.27
VAPB-203ENST00000463370 TUSC3Q13454 348 aa13.34□□□□□ -0.27
VAPB-203ENST00000463370 TNFAIP8L3Q5GJ75 292 aa13.34□□□□□ -0.27
VAPB-203ENST00000463370 FNBP1LQ5T0N5 605 aa13.34□□□□□ -0.27
VAPB-203ENST00000463370 C6orf118Q5T5N4 469 aa13.34□□□□□ -0.27
VAPB-203ENST00000463370 CAPN12Q6ZSI9 719 aa13.34□□□□□ -0.27
VAPB-203ENST00000463370 LRRTM3Q86VH5 581 aa13.34□□□□□ -0.27
VAPB-203ENST00000463370 ZNF280BQ86YH2 543 aa13.34□□□□□ -0.27
VAPB-203ENST00000463370 SIX6OS1Q8N1H7 587 aa13.34□□□□□ -0.27
VAPB-203ENST00000463370 NAT8LQ8N9F0 302 aa13.34□□□□□ -0.27
VAPB-203ENST00000463370 WDR83Q9BRX9 315 aaKnown RBP13.34□□□□□ -0.27
VAPB-203ENST00000463370 TSPYL1Q9H0U9 437 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms