RNA–Protein interactions for RNA: ENST00000463041.1

PTPRF-210, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 3

Gene PTPRF, Length 298 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-210ENST00000463041 KIAA1549LQ6ZVL6 1849 aa7.67□□□□□ -1.18
PTPRF-210ENST00000463041 A0A1W2PQH9 124 aa7.67□□□□□ -1.18
PTPRF-210ENST00000463041 BICDL2A1A5D9 508 aa7.67□□□□□ -1.18
PTPRF-210ENST00000463041 TBC1D3BA6NDS4 549 aa7.67□□□□□ -1.18
PTPRF-210ENST00000463041 HOXC11O43248 304 aaPredicted RBP7.67□□□□□ -1.18
PTPRF-210ENST00000463041 KAT7O95251 611 aa7.67□□□□□ -1.18
PTPRF-210ENST00000463041 TBX18O95935 607 aa7.67□□□□□ -1.18
PTPRF-210ENST00000463041 CCDC192P0DO97 292 aa7.67□□□□□ -1.18
PTPRF-210ENST00000463041 RALAP11233 206 aa7.67□□□□□ -1.18
PTPRF-210ENST00000463041 TBXAS1P24557 533 aaPredicted RBP7.67□□□□□ -1.18
PTPRF-210ENST00000463041 HOXC13P31276 330 aa7.67□□□□□ -1.18
PTPRF-210ENST00000463041 PXNP49023 591 aaPredicted RBP7.67□□□□□ -1.18
PTPRF-210ENST00000463041 PGFP49763 221 aa7.67□□□□□ -1.18
PTPRF-210ENST00000463041 DGKEP52429 567 aa7.67□□□□□ -1.18
PTPRF-210ENST00000463041 PMS1P54277 932 aaKnown RBP7.67□□□□□ -1.18
PTPRF-210ENST00000463041 COG7P83436 770 aa7.67□□□□□ -1.18
PTPRF-210ENST00000463041 SPEM2Q0P670 501 aa7.67□□□□□ -1.18
PTPRF-210ENST00000463041 CETN1Q12798 172 aa7.67□□□□□ -1.18
PTPRF-210ENST00000463041 CSRP2Q16527 193 aa7.67□□□□□ -1.18
PTPRF-210ENST00000463041 LPAL2Q16609 132 aa7.67□□□□□ -1.18
PTPRF-210ENST00000463041 RSPO4Q2I0M5 234 aaPredicted RBP7.67□□□□□ -1.18
PTPRF-210ENST00000463041 CBWD6Q4V339 395 aa7.67□□□□□ -1.18
PTPRF-210ENST00000463041 USP39Q53GS9 565 aaKnown RBP7.67□□□□□ -1.18
PTPRF-210ENST00000463041 C2orf27AQ580R0 203 aa7.67□□□□□ -1.18
PTPRF-210ENST00000463041 DCAF17Q5H9S7 520 aaPredicted RBP7.67□□□□□ -1.18
PTPRF-210ENST00000463041 CBWD3Q5JTY5 395 aa7.67□□□□□ -1.18
PTPRF-210ENST00000463041 CBWD5Q5RIA9 395 aa7.67□□□□□ -1.18
PTPRF-210ENST00000463041 PM20D1Q6GTS8 502 aa7.67□□□□□ -1.18
PTPRF-210ENST00000463041 ISM2Q6H9L7 571 aa7.67□□□□□ -1.18
PTPRF-210ENST00000463041 DGLUCYQ7Z3D6 616 aa7.67□□□□□ -1.18
PTPRF-210ENST00000463041 ARHGAP30Q7Z6I6 1101 aaPredicted RBP7.67□□□□□ -1.18
PTPRF-210ENST00000463041 C11orf74Q86VG3 221 aa7.67□□□□□ -1.18
PTPRF-210ENST00000463041 TMEM25Q86YD3 366 aa7.67□□□□□ -1.18
PTPRF-210ENST00000463041 BBS7Q8IWZ6 715 aa7.67□□□□□ -1.18
PTPRF-210ENST00000463041 ARHGAP18Q8N392 663 aa7.67□□□□□ -1.18
PTPRF-210ENST00000463041 ERCC4Q92889 916 aaPredicted RBP7.67□□□□□ -1.18
PTPRF-210ENST00000463041 DCLK3Q9C098 648 aa7.67□□□□□ -1.18
PTPRF-210ENST00000463041 NMUR1Q9HB89 426 aa7.67□□□□□ -1.18
PTPRF-210ENST00000463041 PARD6AQ9NPB6 346 aa7.67□□□□□ -1.18
PTPRF-210ENST00000463041 ARHGEF4Q9NR80 690 aa7.67□□□□□ -1.18
PTPRF-210ENST00000463041 MTPAPQ9NVV4 582 aaKnown RBP eCLIP7.67□□□□□ -1.18
PTPRF-210ENST00000463041 OSER1Q9NX31 292 aa7.67□□□□□ -1.18
PTPRF-210ENST00000463041 DEC1Q9P2X7 70 aa7.67□□□□□ -1.18
PTPRF-210ENST00000463041 LSM7Q9UK45 103 aaKnown RBP7.67□□□□□ -1.18
PTPRF-210ENST00000463041 MAN1B1Q9UKM7 699 aa7.67□□□□□ -1.18
PTPRF-210ENST00000463041 CIZ1Q9ULV3 898 aaPredicted RBP7.67□□□□□ -1.18
PTPRF-210ENST00000463041 MMP17Q9ULZ9 603 aa7.67□□□□□ -1.18
PTPRF-210ENST00000463041 USP18Q9UMW8 372 aa7.67□□□□□ -1.18
PTPRF-210ENST00000463041 ZNF510Q9Y2H8 683 aa7.67□□□□□ -1.18
PTPRF-210ENST00000463041 CEP192Q8TEP8 1941 aa7.66□□□□□ -1.18
PTPRF-210ENST00000463041 PCNX2A6NKB5 2137 aa7.66□□□□□ -1.18
PTPRF-210ENST00000463041 TRIM49BA6NDI0 452 aa7.66□□□□□ -1.18
PTPRF-210ENST00000463041 PPP1R3GB7ZBB8 358 aa7.66□□□□□ -1.18
PTPRF-210ENST00000463041 SCAMP3O14828 347 aaKnown RBP7.66□□□□□ -1.18
PTPRF-210ENST00000463041 P4HA2O15460 535 aa7.66□□□□□ -1.18
PTPRF-210ENST00000463041 CYP26A1O43174 497 aa7.66□□□□□ -1.18
PTPRF-210ENST00000463041 GREM1O60565 184 aa7.66□□□□□ -1.18
PTPRF-210ENST00000463041 ALDH1A2O94788 518 aa7.66□□□□□ -1.18
PTPRF-210ENST00000463041 RHOBTB1O94844 696 aa7.66□□□□□ -1.18
PTPRF-210ENST00000463041 FGFR1OPO95684 399 aaKnown RBP7.66□□□□□ -1.18
PTPRF-210ENST00000463041 GNA14O95837 355 aa7.66□□□□□ -1.18
PTPRF-210ENST00000463041 VDRP11473 427 aa7.66□□□□□ -1.18
PTPRF-210ENST00000463041 TIE1P35590 1138 aa7.66□□□□□ -1.18
PTPRF-210ENST00000463041 KIR2DL1P43626 348 aaPredicted RBP7.66□□□□□ -1.18
PTPRF-210ENST00000463041 FMO5P49326 533 aa7.66□□□□□ -1.18
PTPRF-210ENST00000463041 ATXN1P54253 815 aaKnown RBP7.66□□□□□ -1.18
PTPRF-210ENST00000463041 SEC13P55735 322 aa7.66□□□□□ -1.18
PTPRF-210ENST00000463041 CUL2Q13617 745 aa7.66□□□□□ -1.18
PTPRF-210ENST00000463041 MORC3Q14149 939 aa7.66□□□□□ -1.18
PTPRF-210ENST00000463041 CRY1Q16526 586 aa7.66□□□□□ -1.18
PTPRF-210ENST00000463041 ANO4Q32M45 955 aa7.66□□□□□ -1.18
PTPRF-210ENST00000463041 SGO2Q562F6 1265 aa7.66□□□□□ -1.18
PTPRF-210ENST00000463041 RAB41Q5JT25 222 aa7.66□□□□□ -1.18
PTPRF-210ENST00000463041 EOGTQ5NDL2 527 aa7.66□□□□□ -1.18
PTPRF-210ENST00000463041 C10orf120Q5SQS8 335 aa7.66□□□□□ -1.18
PTPRF-210ENST00000463041 TTI2Q6NXR4 508 aa7.66□□□□□ -1.18
PTPRF-210ENST00000463041 GPRIN1Q7Z2K8 1008 aa7.66□□□□□ -1.18
PTPRF-210ENST00000463041 TRMT11Q7Z4G4 463 aaKnown RBP7.66□□□□□ -1.18
PTPRF-210ENST00000463041 SCD5Q86SK9 330 aa7.66□□□□□ -1.18
PTPRF-210ENST00000463041 KBTBD6Q86V97 674 aa7.66□□□□□ -1.18
PTPRF-210ENST00000463041 RASSF3Q86WH2 238 aa7.66□□□□□ -1.18
PTPRF-210ENST00000463041 ETFBKMTQ8IXQ9 262 aa7.66□□□□□ -1.18
PTPRF-210ENST00000463041 CCDC33Q8N5R6 958 aa7.66□□□□□ -1.18
PTPRF-210ENST00000463041 NAT16Q8N8M0 369 aa7.66□□□□□ -1.18
PTPRF-210ENST00000463041 TSTD1Q8NFU3 115 aa7.66□□□□□ -1.18
PTPRF-210ENST00000463041 WBP2Q969T9 261 aa7.66□□□□□ -1.18
PTPRF-210ENST00000463041 SLC35C1Q96A29 364 aa7.66□□□□□ -1.18
PTPRF-210ENST00000463041 JAKMIP2Q96AA8 810 aa7.66□□□□□ -1.18
PTPRF-210ENST00000463041 XPO6Q96QU8 1125 aaKnown RBP7.66□□□□□ -1.18
PTPRF-210ENST00000463041 HHIPQ96QV1 700 aa7.66□□□□□ -1.18
PTPRF-210ENST00000463041 RTKNQ9BST9 563 aa7.66□□□□□ -1.18
PTPRF-210ENST00000463041 POLMQ9NP87 494 aaPredicted RBP7.66□□□□□ -1.18
PTPRF-210ENST00000463041 SEMA4GQ9NTN9 838 aa7.66□□□□□ -1.18
PTPRF-210ENST00000463041 POLR3BQ9NW08 1133 aaPredicted RBP7.66□□□□□ -1.18
PTPRF-210ENST00000463041 HESX1Q9UBX0 185 aa7.66□□□□□ -1.18
PTPRF-210ENST00000463041 NAGPAQ9UK23 515 aa7.66□□□□□ -1.18
PTPRF-210ENST00000463041 STARD13Q9Y3M8 1113 aa7.66□□□□□ -1.18
PTPRF-210ENST00000463041 PCDHGA5Q9Y5G8 931 aa7.66□□□□□ -1.18
PTPRF-210ENST00000463041 TPRP12270 2363 aaKnown RBP7.66□□□□□ -1.18
PTPRF-210ENST00000463041 XPO1O14980 1071 aaKnown RBP7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms