RNA–Protein interactions for RNA: ENST00000462542.5

PCCB-203, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 3

Gene PCCB, Length 488 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-203ENST00000462542 BBS7Q8IWZ6 715 aa12.37□□□□□ -0.43
PCCB-203ENST00000462542 GPD1LQ8N335 351 aa12.37□□□□□ -0.43
PCCB-203ENST00000462542 LSM14AQ8ND56 463 aaKnown RBP12.37□□□□□ -0.43
PCCB-203ENST00000462542 OR6B3Q8NGW1 331 aa12.37□□□□□ -0.43
PCCB-203ENST00000462542 BAHD1Q8TBE0 780 aaPredicted RBP12.37□□□□□ -0.43
PCCB-203ENST00000462542 ACOX2Q99424 681 aa12.37□□□□□ -0.43
PCCB-203ENST00000462542 PRDM16Q9HAZ2 1276 aa12.37□□□□□ -0.43
PCCB-203ENST00000462542 DNAJC17Q9NVM6 304 aaKnown RBP12.37□□□□□ -0.43
PCCB-203ENST00000462542 WSB2Q9NYS7 404 aaPredicted RBP12.37□□□□□ -0.43
PCCB-203ENST00000462542 MEI4A8MW99 385 aa12.36□□□□□ -0.43
PCCB-203ENST00000462542 NPC1O15118 1278 aa12.36□□□□□ -0.43
PCCB-203ENST00000462542 TRIM24O15164 1050 aa12.36□□□□□ -0.43
PCCB-203ENST00000462542 BCAT2O15382 392 aaPredicted RBP12.36□□□□□ -0.43
PCCB-203ENST00000462542 CACNG3O60359 315 aa12.36□□□□□ -0.43
PCCB-203ENST00000462542 CILPO75339 1184 aa12.36□□□□□ -0.43
PCCB-203ENST00000462542 PRPF6O94906 941 aaKnown RBP12.36□□□□□ -0.43
PCCB-203ENST00000462542 GCNT3O95395 438 aa12.36□□□□□ -0.43
PCCB-203ENST00000462542 ZIC2O95409 532 aaPredicted RBP12.36□□□□□ -0.43
PCCB-203ENST00000462542 NCAM1P13591 858 aa12.36□□□□□ -0.43
PCCB-203ENST00000462542 TYRP14679 529 aa12.36□□□□□ -0.43
PCCB-203ENST00000462542 IFRD2Q12894 506 aaPredicted RBP12.36□□□□□ -0.43
PCCB-203ENST00000462542 STARD3Q14849 445 aa12.36□□□□□ -0.43
PCCB-203ENST00000462542 HLA-BQ31612 363 aa12.36□□□□□ -0.43
PCCB-203ENST00000462542 KIAA1324Q6UXG2 1013 aaKnown RBP12.36□□□□□ -0.43
PCCB-203ENST00000462542 NOC3LQ8WTT2 800 aaKnown RBP12.36□□□□□ -0.43
PCCB-203ENST00000462542 TOE1Q96GM8 510 aaKnown RBP12.36□□□□□ -0.43
PCCB-203ENST00000462542 GPR174Q9BXC1 333 aa12.36□□□□□ -0.43
PCCB-203ENST00000462542 BBS2Q9BXC9 721 aa12.36□□□□□ -0.43
PCCB-203ENST00000462542 NACA2Q9H009 215 aa12.36□□□□□ -0.43
PCCB-203ENST00000462542 PCIF1Q9H4Z3 704 aa12.36□□□□□ -0.43
PCCB-203ENST00000462542 KIAA1586Q9HCI6 787 aa12.36□□□□□ -0.43
PCCB-203ENST00000462542 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.36□□□□□ -0.432e-23■■■■■ 142.5
PCCB-203ENST00000462542 OLFML3Q9NRN5 406 aa12.36□□□□□ -0.43
PCCB-203ENST00000462542 TOR4AQ9NXH8 423 aa12.36□□□□□ -0.43
PCCB-203ENST00000462542 IL37Q9NZH6 218 aa12.36□□□□□ -0.43
PCCB-203ENST00000462542 MARK1Q9P0L2 795 aa12.36□□□□□ -0.43
PCCB-203ENST00000462542 STK17AQ9UEE5 414 aa12.36□□□□□ -0.43
PCCB-203ENST00000462542 CCDC39Q9UFE4 941 aa12.36□□□□□ -0.43
PCCB-203ENST00000462542 METTL12A8MUP2 240 aa12.35□□□□□ -0.43
PCCB-203ENST00000462542 PRRT4C9JH25 899 aa12.35□□□□□ -0.43
PCCB-203ENST00000462542 NEDD8-MDP1E9PL57 170 aa12.35□□□□□ -0.43
PCCB-203ENST00000462542 H3BQV1 296 aa12.35□□□□□ -0.43
PCCB-203ENST00000462542 ATXN1LP0C7T5 689 aaKnown RBP12.35□□□□□ -0.43
PCCB-203ENST00000462542 ZDHHC11BP0C7U3 371 aa12.35□□□□□ -0.43
PCCB-203ENST00000462542 CACNA2D1P54289 1103 aa12.35□□□□□ -0.43
PCCB-203ENST00000462542 CAMK2BQ13554 666 aa12.35□□□□□ -0.43
PCCB-203ENST00000462542 SV2BQ7L1I2 683 aa12.35□□□□□ -0.43
PCCB-203ENST00000462542 WDR49Q8IV35 697 aa12.35□□□□□ -0.43
PCCB-203ENST00000462542 ENGASEQ8NFI3 743 aa12.35□□□□□ -0.43
PCCB-203ENST00000462542 OR5B17Q8NGF7 314 aa12.35□□□□□ -0.43
PCCB-203ENST00000462542 DNAJC19Q96DA6 116 aa12.35□□□□□ -0.43
PCCB-203ENST00000462542 MRPL45Q9BRJ2 306 aaKnown RBP12.35□□□□□ -0.43
PCCB-203ENST00000462542 CBWD1Q9BRT8 395 aa12.35□□□□□ -0.43
PCCB-203ENST00000462542 NUP58Q9BVL2 599 aa12.35□□□□□ -0.43
PCCB-203ENST00000462542 B3GNT5Q9BYG0 378 aa12.35□□□□□ -0.43
PCCB-203ENST00000462542 MIR1-1HGQ9H1L0 117 aa12.35□□□□□ -0.43
PCCB-203ENST00000462542 PCED1AQ9H1Q7 454 aa12.35□□□□□ -0.43
PCCB-203ENST00000462542 CCSER2Q9H7U1 834 aa12.35□□□□□ -0.43
PCCB-203ENST00000462542 TBC1D7Q9P0N9 293 aa12.35□□□□□ -0.43
PCCB-203ENST00000462542 USP36Q9P275 1121 aaKnown RBP12.35□□□□□ -0.43
PCCB-203ENST00000462542 ATP8B3O60423 1300 aa12.35□□□□□ -0.43
PCCB-203ENST00000462542 SHROOM3Q8TF72 1996 aa12.34□□□□□ -0.43
PCCB-203ENST00000462542 FAM92AA1XBS5 289 aa12.34□□□□□ -0.43
PCCB-203ENST00000462542 A8MXQ7 604 aa12.34□□□□□ -0.43
PCCB-203ENST00000462542 WASH3PC4AMC7 463 aa12.34□□□□□ -0.43
PCCB-203ENST00000462542 TNFSF14O43557 240 aa12.34□□□□□ -0.43
PCCB-203ENST00000462542 CST3P01034 146 aaPredicted RBP12.34□□□□□ -0.43
PCCB-203ENST00000462542 CISD3P0C7P0 127 aa12.34□□□□□ -0.43
PCCB-203ENST00000462542 ABCG1P45844 678 aa12.34□□□□□ -0.43
PCCB-203ENST00000462542 DGKGP49619 791 aa12.34□□□□□ -0.43
PCCB-203ENST00000462542 TNNC1P63316 161 aa12.34□□□□□ -0.43
PCCB-203ENST00000462542 GOLGA8FQ08AF8 430 aa12.34□□□□□ -0.43
PCCB-203ENST00000462542 GOLGA8DPQ0D2H9 430 aa12.34□□□□□ -0.43
PCCB-203ENST00000462542 SMAD1Q15797 465 aaKnown RBP12.34□□□□□ -0.43
PCCB-203ENST00000462542 DCAF12L1Q5VU92 463 aa12.34□□□□□ -0.43
PCCB-203ENST00000462542 TRAPPC11Q7Z392 1133 aa12.34□□□□□ -0.43
PCCB-203ENST00000462542 ZCCHC9Q8N567 271 aaKnown RBP12.34□□□□□ -0.43
PCCB-203ENST00000462542 B3GALNT2Q8NCR0 500 aa12.34□□□□□ -0.43
PCCB-203ENST00000462542 SCAMP5Q8TAC9 235 aa12.34□□□□□ -0.43
PCCB-203ENST00000462542 SLC39A7Q92504 469 aa12.34□□□□□ -0.43
PCCB-203ENST00000462542 FAM84AQ96KN4 292 aa12.34□□□□□ -0.43
PCCB-203ENST00000462542 ZNF518BQ9C0D4 1074 aa12.34□□□□□ -0.43
PCCB-203ENST00000462542 SLC6A17Q9H1V8 727 aa12.34□□□□□ -0.43
PCCB-203ENST00000462542 IL21RQ9HBE5 538 aa12.34□□□□□ -0.43
PCCB-203ENST00000462542 TMEM30AQ9NV96 361 aa12.34□□□□□ -0.43
PCCB-203ENST00000462542 LSM7Q9UK45 103 aaKnown RBP12.34□□□□□ -0.43
PCCB-203ENST00000462542 FBXO10Q9UK96 956 aa12.34□□□□□ -0.43
PCCB-203ENST00000462542 RAD54BQ9Y620 910 aa12.34□□□□□ -0.43
PCCB-203ENST00000462542 STON1Q9Y6Q2 735 aa12.34□□□□□ -0.43
PCCB-203ENST00000462542 GOLGA4Q13439 2230 aaKnown RBP12.33□□□□□ -0.44
PCCB-203ENST00000462542 CLDN5O00501 218 aa12.33□□□□□ -0.44
PCCB-203ENST00000462542 ATXN7O15265 892 aaPredicted RBP12.33□□□□□ -0.44
PCCB-203ENST00000462542 GREM1O60565 184 aa12.33□□□□□ -0.44
PCCB-203ENST00000462542 STAU1O95793 577 aaKnown RBP12.33□□□□□ -0.44
PCCB-203ENST00000462542 IGLV3-19P01714 112 aa12.33□□□□□ -0.44
PCCB-203ENST00000462542 HLA-EP13747 358 aa12.33□□□□□ -0.44
PCCB-203ENST00000462542 ATP5C1P36542 298 aaKnown RBP12.33□□□□□ -0.44
PCCB-203ENST00000462542 TPMTP51580 245 aa12.33□□□□□ -0.44
PCCB-203ENST00000462542 AFF3P51826 1226 aaKnown RBP12.33□□□□□ -0.44
PCCB-203ENST00000462542 WDR72Q3MJ13 1102 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 204.2 ms