RNA–Protein interactions for RNA: ENST00000461874.1

VARS-220, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 845 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-220ENST00000461874 SCD5Q86SK9 330 aa19.96■□□□□ 0.79
VARS-220ENST00000461874 KBTBD6Q86V97 674 aa19.96■□□□□ 0.79
VARS-220ENST00000461874 SFTPA1Q8IWL2 248 aa19.96■□□□□ 0.79
VARS-220ENST00000461874 ETFBKMTQ8IXQ9 262 aa19.96■□□□□ 0.79
VARS-220ENST00000461874 CEP63Q96MT8 703 aa19.96■□□□□ 0.79
VARS-220ENST00000461874 UBXN6Q9BZV1 441 aa19.96■□□□□ 0.79
VARS-220ENST00000461874 METTL14Q9HCE5 456 aaKnown RBP19.96■□□□□ 0.79
VARS-220ENST00000461874 ARHGEF4Q9NR80 690 aa19.96■□□□□ 0.79
VARS-220ENST00000461874 SPHK2Q9NRA0 654 aa19.96■□□□□ 0.79
VARS-220ENST00000461874 SEMA4GQ9NTN9 838 aa19.96■□□□□ 0.79
VARS-220ENST00000461874 MMP17Q9ULZ9 603 aa19.96■□□□□ 0.79
VARS-220ENST00000461874 MYH10P35580 1976 aa19.95■□□□□ 0.78
VARS-220ENST00000461874 CHRM1P11229 460 aaPredicted RBP19.95■□□□□ 0.78
VARS-220ENST00000461874 PPP1R2P41236 205 aa19.95■□□□□ 0.78
VARS-220ENST00000461874 PSEN1P49768 467 aa19.95■□□□□ 0.78
VARS-220ENST00000461874 CUL2Q13617 745 aa19.95■□□□□ 0.78
VARS-220ENST00000461874 CSRP2Q16527 193 aa19.95■□□□□ 0.78
VARS-220ENST00000461874 TMEM25Q86YD3 366 aa19.95■□□□□ 0.78
VARS-220ENST00000461874 PHTF2Q8N3S3 785 aa19.95■□□□□ 0.78
VARS-220ENST00000461874 ZNF276Q8N554 614 aa19.95■□□□□ 0.78
VARS-220ENST00000461874 CCDC33Q8N5R6 958 aa19.95■□□□□ 0.78
VARS-220ENST00000461874 ANKRD52Q8NB46 1076 aa19.95■□□□□ 0.78
VARS-220ENST00000461874 TSTD1Q8NFU3 115 aa19.95■□□□□ 0.78
VARS-220ENST00000461874 LOXL4Q96JB6 756 aa19.95■□□□□ 0.78
VARS-220ENST00000461874 DNMT3LQ9UJW3 386 aa19.95■□□□□ 0.78
VARS-220ENST00000461874 NAGPAQ9UK23 515 aa19.95■□□□□ 0.78
VARS-220ENST00000461874 NUDT5Q9UKK9 219 aa19.95■□□□□ 0.78
VARS-220ENST00000461874 MYOFQ9NZM1 2061 aa19.95■□□□□ 0.78
VARS-220ENST00000461874 MDM4O15151 490 aa19.94■□□□□ 0.78
VARS-220ENST00000461874 GADD45BO75293 160 aaPredicted RBP19.94■□□□□ 0.78
VARS-220ENST00000461874 BMP6P22004 513 aa19.94■□□□□ 0.78
VARS-220ENST00000461874 TNFRSF4P43489 277 aa19.94■□□□□ 0.78
VARS-220ENST00000461874 PLA2G4AP47712 749 aa19.94■□□□□ 0.78
VARS-220ENST00000461874 KDSRQ06136 332 aa19.94■□□□□ 0.78
VARS-220ENST00000461874 GOLGA8FQ08AF8 430 aa19.94■□□□□ 0.78
VARS-220ENST00000461874 GOLGA8DPQ0D2H9 430 aa19.94■□□□□ 0.78
VARS-220ENST00000461874 C10orf120Q5SQS8 335 aa19.94■□□□□ 0.78
VARS-220ENST00000461874 BTBD8Q5XKL5 378 aa19.94■□□□□ 0.78
VARS-220ENST00000461874 TADA2BQ86TJ2 420 aa19.94■□□□□ 0.78
VARS-220ENST00000461874 NAT16Q8N8M0 369 aa19.94■□□□□ 0.78
VARS-220ENST00000461874 ZC3H10Q96K80 434 aaKnown RBP19.94■□□□□ 0.78
VARS-220ENST00000461874 CLIC5Q9NZA1 410 aa19.94■□□□□ 0.78
VARS-220ENST00000461874 DYNC1LI1Q9Y6G9 523 aaKnown RBP19.94■□□□□ 0.78
VARS-220ENST00000461874 PPP1R3GB7ZBB8 358 aa19.93■□□□□ 0.78
VARS-220ENST00000461874 PMM2O15305 246 aa19.93■□□□□ 0.78
VARS-220ENST00000461874 TULP3O75386 442 aa19.93■□□□□ 0.78
VARS-220ENST00000461874 RALAP11233 206 aa19.93■□□□□ 0.78
VARS-220ENST00000461874 KIR2DL1P43626 348 aaPredicted RBP19.93■□□□□ 0.78
VARS-220ENST00000461874 FMO5P49326 533 aa19.93■□□□□ 0.78
VARS-220ENST00000461874 MORC3Q14149 939 aa19.93■□□□□ 0.78
VARS-220ENST00000461874 CRY1Q16526 586 aa19.93■□□□□ 0.78
VARS-220ENST00000461874 ANO4Q32M45 955 aa19.93■□□□□ 0.78
VARS-220ENST00000461874 HSF5Q4G112 596 aaPredicted RBP19.93■□□□□ 0.78
VARS-220ENST00000461874 RAB41Q5JT25 222 aa19.93■□□□□ 0.78
VARS-220ENST00000461874 EMC10Q5UCC4 262 aa19.93■□□□□ 0.78
VARS-220ENST00000461874 TTI2Q6NXR4 508 aa19.93■□□□□ 0.78
VARS-220ENST00000461874 FOXR2Q6PJQ5 311 aa19.93■□□□□ 0.78
VARS-220ENST00000461874 PRR23CQ6ZRP0 262 aa19.93■□□□□ 0.78
VARS-220ENST00000461874 PIGZQ86VD9 579 aa19.93■□□□□ 0.78
VARS-220ENST00000461874 ALLCQ8N6M5 410 aa19.93■□□□□ 0.78
VARS-220ENST00000461874 IL17RCQ8NAC3 791 aa19.93■□□□□ 0.78
VARS-220ENST00000461874 DEC1Q9P2X7 70 aa19.93■□□□□ 0.78
VARS-220ENST00000461874 LSM7Q9UK45 103 aaKnown RBP19.93■□□□□ 0.78
VARS-220ENST00000461874 CDV3Q9UKY7 258 aaKnown RBP19.93■□□□□ 0.78
VARS-220ENST00000461874 TBC1D3BA6NDS4 549 aa19.92■□□□□ 0.78
VARS-220ENST00000461874 EPN2O95208 641 aa19.92■□□□□ 0.78
VARS-220ENST00000461874 KLF8O95600 359 aaPredicted RBP19.92■□□□□ 0.78
VARS-220ENST00000461874 TIE1P35590 1138 aa19.92■□□□□ 0.78
VARS-220ENST00000461874 DGKEP52429 567 aa19.92■□□□□ 0.78
VARS-220ENST00000461874 ATXN1P54253 815 aaKnown RBP19.92■□□□□ 0.78
VARS-220ENST00000461874 SLC8A3P57103 927 aa19.92■□□□□ 0.78
VARS-220ENST00000461874 YWHAEP62258 255 aaKnown RBP19.92■□□□□ 0.78
VARS-220ENST00000461874 LRMPQ12912 555 aa19.92■□□□□ 0.78
VARS-220ENST00000461874 PLK5Q496M5 336 aa19.92■□□□□ 0.78
VARS-220ENST00000461874 PREPLQ4J6C6 727 aaPredicted RBP19.92■□□□□ 0.78
VARS-220ENST00000461874 KLHL10Q6JEL2 608 aa19.92■□□□□ 0.78
VARS-220ENST00000461874 RASSF3Q86WH2 238 aa19.92■□□□□ 0.78
VARS-220ENST00000461874 TTC30AQ86WT1 665 aa19.92■□□□□ 0.78
VARS-220ENST00000461874 UBR7Q8N806 425 aa19.92■□□□□ 0.78
VARS-220ENST00000461874 TXNDC5Q8NBS9 432 aaKnown RBP19.92■□□□□ 0.78
VARS-220ENST00000461874 NELFBQ8WX92 580 aa19.92■□□□□ 0.78
VARS-220ENST00000461874 CDK5RAP1Q96SZ6 601 aaKnown RBP19.92■□□□□ 0.78
VARS-220ENST00000461874 ARRDC1-AS1Q9H2J1 176 aa19.92■□□□□ 0.78
VARS-220ENST00000461874 CIZ1Q9ULV3 898 aaPredicted RBP19.92■□□□□ 0.78
VARS-220ENST00000461874 SPAG17Q6Q759 2223 aa19.91■□□□□ 0.78
VARS-220ENST00000461874 MYO16Q9Y6X6 1858 aa19.91■□□□□ 0.78
VARS-220ENST00000461874 SGK1O00141 431 aa19.91■□□□□ 0.78
VARS-220ENST00000461874 DCLK1O15075 740 aa19.91■□□□□ 0.78
VARS-220ENST00000461874 FOXD2O60548 495 aaPredicted RBP19.91■□□□□ 0.78
VARS-220ENST00000461874 HNRNPLP14866 589 aaKnown RBP eCLIP19.91■□□□□ 0.78
VARS-220ENST00000461874 TBXAS1P24557 533 aaPredicted RBP19.91■□□□□ 0.78
VARS-220ENST00000461874 GOLGA7BQ2TAP0 167 aa19.91■□□□□ 0.78
VARS-220ENST00000461874 CCDC40Q4G0X9 1142 aa19.91■□□□□ 0.78
VARS-220ENST00000461874 SGO2Q562F6 1265 aa19.91■□□□□ 0.78
VARS-220ENST00000461874 ANO7Q6IWH7 933 aa19.91■□□□□ 0.78
VARS-220ENST00000461874 TMEM92Q6UXU6 159 aa19.91■□□□□ 0.78
VARS-220ENST00000461874 Q6ZNB5 142 aa19.91■□□□□ 0.78
VARS-220ENST00000461874 ARHGAP18Q8N392 663 aa19.91■□□□□ 0.78
VARS-220ENST00000461874 CNOT6LQ96LI5 555 aaKnown RBP19.91■□□□□ 0.78
VARS-220ENST00000461874 DUSP15Q9H1R2 295 aaPredicted RBP19.91■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms