RNA–Protein interactions for RNA: ENST00000461798.5

BRCA1-207, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 3

Gene BRCA1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-207ENST00000461798 PMM2O15305 246 aa9.66□□□□□ -0.86
BRCA1-207ENST00000461798 KAT7O95251 611 aa9.66□□□□□ -0.86
BRCA1-207ENST00000461798 TBX18O95935 607 aa9.66□□□□□ -0.86
BRCA1-207ENST00000461798 ADH5P11766 374 aa9.66□□□□□ -0.86
BRCA1-207ENST00000461798 CD58P19256 250 aa9.66□□□□□ -0.86
BRCA1-207ENST00000461798 ACO1P21399 889 aaKnown RBP9.66□□□□□ -0.86
BRCA1-207ENST00000461798 ADORA2BP29275 332 aa9.66□□□□□ -0.86
BRCA1-207ENST00000461798 ATP5C1P36542 298 aaKnown RBP9.66□□□□□ -0.86
BRCA1-207ENST00000461798 PXNP49023 591 aaPredicted RBP9.66□□□□□ -0.86
BRCA1-207ENST00000461798 ATXN1P54253 815 aaKnown RBP9.66□□□□□ -0.86
BRCA1-207ENST00000461798 PMS1P54277 932 aaKnown RBP9.66□□□□□ -0.86
BRCA1-207ENST00000461798 RAD23BP54727 409 aa9.66□□□□□ -0.86
BRCA1-207ENST00000461798 LY6G5CQ5SRR4 150 aa9.66□□□□□ -0.86
BRCA1-207ENST00000461798 PPP1R26Q5T8A7 1209 aaPredicted RBP9.66□□□□□ -0.86
BRCA1-207ENST00000461798 ARHGAP17Q68EM7 881 aa9.66□□□□□ -0.86
BRCA1-207ENST00000461798 GPRIN1Q7Z2K8 1008 aa9.66□□□□□ -0.86
BRCA1-207ENST00000461798 DGLUCYQ7Z3D6 616 aa9.66□□□□□ -0.86
BRCA1-207ENST00000461798 CCDC186Q7Z3E2 898 aa9.66□□□□□ -0.86
BRCA1-207ENST00000461798 ARHGAP30Q7Z6I6 1101 aaPredicted RBP9.66□□□□□ -0.86
BRCA1-207ENST00000461798 RASSF3Q86WH2 238 aa9.66□□□□□ -0.86
BRCA1-207ENST00000461798 BBS7Q8IWZ6 715 aa9.66□□□□□ -0.86
BRCA1-207ENST00000461798 ETFBKMTQ8IXQ9 262 aa9.66□□□□□ -0.86
BRCA1-207ENST00000461798 PHTF2Q8N3S3 785 aa9.66□□□□□ -0.86
BRCA1-207ENST00000461798 SLC4A11Q8NBS3 891 aa9.66□□□□□ -0.86
BRCA1-207ENST00000461798 KCNV2Q8TDN2 545 aa9.66□□□□□ -0.86
BRCA1-207ENST00000461798 SMARCE1Q969G3 411 aa9.66□□□□□ -0.86
BRCA1-207ENST00000461798 WBP2Q969T9 261 aa9.66□□□□□ -0.86
BRCA1-207ENST00000461798 EEF2KMTQ96G04 330 aa9.66□□□□□ -0.86
BRCA1-207ENST00000461798 TMEM176AQ96HP8 235 aa9.66□□□□□ -0.86
BRCA1-207ENST00000461798 DHTKD1Q96HY7 919 aaPredicted RBP9.66□□□□□ -0.86
BRCA1-207ENST00000461798 TSG101Q99816 390 aa9.66□□□□□ -0.86
BRCA1-207ENST00000461798 MMRN2Q9H8L6 949 aa9.66□□□□□ -0.86
BRCA1-207ENST00000461798 NMUR1Q9HB89 426 aa9.66□□□□□ -0.86
BRCA1-207ENST00000461798 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.66□□□□□ -0.86
BRCA1-207ENST00000461798 CISHQ9NSE2 258 aa9.66□□□□□ -0.86
BRCA1-207ENST00000461798 MTPAPQ9NVV4 582 aaKnown RBP eCLIP9.66□□□□□ -0.86
BRCA1-207ENST00000461798 POLR3BQ9NW08 1133 aaPredicted RBP9.66□□□□□ -0.86
BRCA1-207ENST00000461798 OSER1Q9NX31 292 aa9.66□□□□□ -0.86
BRCA1-207ENST00000461798 CLIC5Q9NZA1 410 aa9.66□□□□□ -0.86
BRCA1-207ENST00000461798 HOOK1Q9UJC3 728 aaKnown RBP9.66□□□□□ -0.86
BRCA1-207ENST00000461798 MMP17Q9ULZ9 603 aa9.66□□□□□ -0.86
BRCA1-207ENST00000461798 USP18Q9UMW8 372 aa9.66□□□□□ -0.86
BRCA1-207ENST00000461798 SH3BP1Q9Y3L3 701 aa9.66□□□□□ -0.86
BRCA1-207ENST00000461798 PCDHGA5Q9Y5G8 931 aa9.66□□□□□ -0.86
BRCA1-207ENST00000461798 EPN2O95208 641 aa9.65□□□□□ -0.86
BRCA1-207ENST00000461798 APODP05090 189 aa9.65□□□□□ -0.86
BRCA1-207ENST00000461798 ZNF806P0C7X5 589 aa9.65□□□□□ -0.86
BRCA1-207ENST00000461798 PPP1R2P41236 205 aa9.65□□□□□ -0.86
BRCA1-207ENST00000461798 KIR2DL1P43626 348 aaPredicted RBP9.65□□□□□ -0.86
BRCA1-207ENST00000461798 PLA2G4AP47712 749 aa9.65□□□□□ -0.86
BRCA1-207ENST00000461798 DGKEP52429 567 aa9.65□□□□□ -0.86
BRCA1-207ENST00000461798 MESP2Q0VG99 397 aa9.65□□□□□ -0.86
BRCA1-207ENST00000461798 CRY1Q16526 586 aa9.65□□□□□ -0.86
BRCA1-207ENST00000461798 PLK5Q496M5 336 aa9.65□□□□□ -0.86
BRCA1-207ENST00000461798 PREPLQ4J6C6 727 aaPredicted RBP9.65□□□□□ -0.86
BRCA1-207ENST00000461798 CBWD6Q4V339 395 aa9.65□□□□□ -0.86
BRCA1-207ENST00000461798 C2orf27AQ580R0 203 aa9.65□□□□□ -0.86
BRCA1-207ENST00000461798 RAB41Q5JT25 222 aa9.65□□□□□ -0.86
BRCA1-207ENST00000461798 CBWD3Q5JTY5 395 aa9.65□□□□□ -0.86
BRCA1-207ENST00000461798 PLA2G2CQ5R387 149 aa9.65□□□□□ -0.86
BRCA1-207ENST00000461798 CBWD5Q5RIA9 395 aa9.65□□□□□ -0.86
BRCA1-207ENST00000461798 PRR23CQ6ZRP0 262 aa9.65□□□□□ -0.86
BRCA1-207ENST00000461798 SCD5Q86SK9 330 aa9.65□□□□□ -0.86
BRCA1-207ENST00000461798 KBTBD6Q86V97 674 aa9.65□□□□□ -0.86
BRCA1-207ENST00000461798 C11orf74Q86VG3 221 aa9.65□□□□□ -0.86
BRCA1-207ENST00000461798 C12orf40Q86WS4 652 aa9.65□□□□□ -0.86
BRCA1-207ENST00000461798 TMEM25Q86YD3 366 aa9.65□□□□□ -0.86
BRCA1-207ENST00000461798 ANKRD52Q8NB46 1076 aa9.65□□□□□ -0.86
BRCA1-207ENST00000461798 TSTD1Q8NFU3 115 aa9.65□□□□□ -0.86
BRCA1-207ENST00000461798 NETO1Q8TDF5 533 aa9.65□□□□□ -0.86
BRCA1-207ENST00000461798 TATDN2Q93075 761 aa9.65□□□□□ -0.86
BRCA1-207ENST00000461798 SLC35C1Q96A29 364 aa9.65□□□□□ -0.86
BRCA1-207ENST00000461798 CNOT6LQ96LI5 555 aaKnown RBP9.65□□□□□ -0.86
BRCA1-207ENST00000461798 HEXIM2Q96MH2 286 aaKnown RBP9.65□□□□□ -0.86
BRCA1-207ENST00000461798 HHIPQ96QV1 700 aa9.65□□□□□ -0.86
BRCA1-207ENST00000461798 RTKNQ9BST9 563 aa9.65□□□□□ -0.86
BRCA1-207ENST00000461798 NACA2Q9H009 215 aa9.65□□□□□ -0.86
BRCA1-207ENST00000461798 DUSP15Q9H1R2 295 aaPredicted RBP9.65□□□□□ -0.86
BRCA1-207ENST00000461798 METTL14Q9HCE5 456 aaKnown RBP9.65□□□□□ -0.86
BRCA1-207ENST00000461798 ARHGEF4Q9NR80 690 aa9.65□□□□□ -0.86
BRCA1-207ENST00000461798 SPHK2Q9NRA0 654 aa9.65□□□□□ -0.86
BRCA1-207ENST00000461798 MARK1Q9P0L2 795 aa9.65□□□□□ -0.86
BRCA1-207ENST00000461798 ARMCX3Q9UH62 379 aaPredicted RBP9.65□□□□□ -0.86
BRCA1-207ENST00000461798 STARD13Q9Y3M8 1113 aa9.65□□□□□ -0.86
BRCA1-207ENST00000461798 A0A1W2PQH9 124 aa9.64□□□□□ -0.87
BRCA1-207ENST00000461798 ANTXRLA6NF34 631 aa9.64□□□□□ -0.87
BRCA1-207ENST00000461798 SCAMP3O14828 347 aaKnown RBP9.64□□□□□ -0.87
BRCA1-207ENST00000461798 SLC30A4O14863 429 aa9.64□□□□□ -0.87
BRCA1-207ENST00000461798 CYP26A1O43174 497 aa9.64□□□□□ -0.87
BRCA1-207ENST00000461798 TULP3O75386 442 aa9.64□□□□□ -0.87
BRCA1-207ENST00000461798 CCDC192P0DO97 292 aa9.64□□□□□ -0.87
BRCA1-207ENST00000461798 RARGP13631 454 aa9.64□□□□□ -0.87
BRCA1-207ENST00000461798 LIMK1P53667 647 aa9.64□□□□□ -0.87
BRCA1-207ENST00000461798 CUL2Q13617 745 aa9.64□□□□□ -0.87
BRCA1-207ENST00000461798 ZNF394Q53GI3 561 aa9.64□□□□□ -0.87
BRCA1-207ENST00000461798 EOGTQ5NDL2 527 aa9.64□□□□□ -0.87
BRCA1-207ENST00000461798 BTBD8Q5XKL5 378 aa9.64□□□□□ -0.87
BRCA1-207ENST00000461798 PM20D1Q6GTS8 502 aa9.64□□□□□ -0.87
BRCA1-207ENST00000461798 Q6ZNB5 142 aa9.64□□□□□ -0.87
BRCA1-207ENST00000461798 NUDT18Q6ZVK8 323 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms