RNA–Protein interactions for RNA: ENST00000461127.5

TOP3A-202, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 3

Gene TOP3A, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-202ENST00000461127 PDIA4P13667 645 aaKnown RBP18.27■□□□□ 0.52
TOP3A-202ENST00000461127 GARTP22102 1010 aa18.27■□□□□ 0.52
TOP3A-202ENST00000461127 STARD3Q14849 445 aa18.27■□□□□ 0.52
TOP3A-202ENST00000461127 LIMS2Q7Z4I7 341 aa18.27■□□□□ 0.52
TOP3A-202ENST00000461127 SYCP3Q8IZU3 236 aa18.27■□□□□ 0.52
TOP3A-202ENST00000461127 NUP93Q8N1F7 819 aa18.27■□□□□ 0.52
TOP3A-202ENST00000461127 CADM4Q8NFZ8 388 aa18.27■□□□□ 0.52
TOP3A-202ENST00000461127 BAHD1Q8TBE0 780 aaPredicted RBP18.27■□□□□ 0.52
TOP3A-202ENST00000461127 FBXO32Q969P5 355 aa18.27■□□□□ 0.52
TOP3A-202ENST00000461127 TOE1Q96GM8 510 aaKnown RBP18.27■□□□□ 0.52
TOP3A-202ENST00000461127 CRELD1Q96HD1 420 aa18.27■□□□□ 0.52
TOP3A-202ENST00000461127 ZFRQ96KR1 1074 aaKnown RBP18.27■□□□□ 0.52
TOP3A-202ENST00000461127 NACA2Q9H009 215 aa18.27■□□□□ 0.52
TOP3A-202ENST00000461127 SLC6A17Q9H1V8 727 aa18.27■□□□□ 0.52
TOP3A-202ENST00000461127 SNX25Q9H3E2 840 aa18.27■□□□□ 0.52
TOP3A-202ENST00000461127 PDE11AQ9HCR9 933 aa18.27■□□□□ 0.52
TOP3A-202ENST00000461127 CD248Q9HCU0 757 aa18.27■□□□□ 0.52
TOP3A-202ENST00000461127 CD93Q9NPY3 652 aa18.27■□□□□ 0.52
TOP3A-202ENST00000461127 TOR4AQ9NXH8 423 aa18.27■□□□□ 0.52
TOP3A-202ENST00000461127 SEL1LQ9UBV2 794 aa18.27■□□□□ 0.52
TOP3A-202ENST00000461127 RAD54BQ9Y620 910 aa18.27■□□□□ 0.52
TOP3A-202ENST00000461127 MAST4O15021 2626 aa18.27■□□□□ 0.51
TOP3A-202ENST00000461127 VPS37CA5D8V6 355 aaPredicted RBP18.26■□□□□ 0.51
TOP3A-202ENST00000461127 E9PAM4 449 aa18.26■□□□□ 0.51
TOP3A-202ENST00000461127 TRIM24O15164 1050 aa18.26■□□□□ 0.51
TOP3A-202ENST00000461127 BCAT2O15382 392 aaPredicted RBP18.26■□□□□ 0.51
TOP3A-202ENST00000461127 PPP1R37O75864 691 aa18.26■□□□□ 0.51
TOP3A-202ENST00000461127 DKK1O94907 266 aa18.26■□□□□ 0.51
TOP3A-202ENST00000461127 TNNC2P02585 160 aa18.26■□□□□ 0.51
TOP3A-202ENST00000461127 SYT1P21579 422 aa18.26■□□□□ 0.51
TOP3A-202ENST00000461127 DDIT3P35638 169 aa18.26■□□□□ 0.51
TOP3A-202ENST00000461127 GNL1P36915 607 aaPredicted RBP18.26■□□□□ 0.51
TOP3A-202ENST00000461127 NUCB2P80303 420 aa18.26■□□□□ 0.51
TOP3A-202ENST00000461127 HLA-BQ31612 363 aa18.26■□□□□ 0.51
TOP3A-202ENST00000461127 L1TD1Q5T7N2 865 aaKnown RBP18.26■□□□□ 0.51
TOP3A-202ENST00000461127 SCARA3Q6AZY7 606 aa18.26■□□□□ 0.51
TOP3A-202ENST00000461127 METTL3Q86U44 580 aaKnown RBP18.26■□□□□ 0.51
TOP3A-202ENST00000461127 ZSWIM2Q8NEG5 633 aa18.26■□□□□ 0.51
TOP3A-202ENST00000461127 ENGASEQ8NFI3 743 aa18.26■□□□□ 0.51
TOP3A-202ENST00000461127 FAM84AQ96KN4 292 aa18.26■□□□□ 0.51
TOP3A-202ENST00000461127 GPR174Q9BXC1 333 aa18.26■□□□□ 0.51
TOP3A-202ENST00000461127 IL21RQ9HBE5 538 aa18.26■□□□□ 0.51
TOP3A-202ENST00000461127 WSB2Q9NYS7 404 aaPredicted RBP18.26■□□□□ 0.51
TOP3A-202ENST00000461127 WDR35Q9P2L0 1181 aa18.26■□□□□ 0.51
TOP3A-202ENST00000461127 FNDC3AQ9Y2H6 1198 aaKnown RBP18.26■□□□□ 0.51
TOP3A-202ENST00000461127 KNTC1P50748 2209 aa18.26■□□□□ 0.51
TOP3A-202ENST00000461127 CABIN1Q9Y6J0 2220 aa18.25■□□□□ 0.51
TOP3A-202ENST00000461127 GOLGA8IPA6NC78 632 aa18.25■□□□□ 0.51
TOP3A-202ENST00000461127 GOLGA8JA6NMD2 632 aa18.25■□□□□ 0.51
TOP3A-202ENST00000461127 NEDD8-MDP1E9PL57 170 aa18.25■□□□□ 0.51
TOP3A-202ENST00000461127 STX6O43752 255 aa18.25■□□□□ 0.51
TOP3A-202ENST00000461127 IRF1P10914 325 aa18.25■□□□□ 0.51
TOP3A-202ENST00000461127 TUBP50607 506 aa18.25■□□□□ 0.51
TOP3A-202ENST00000461127 PIP4K2CQ8TBX8 421 aa18.25■□□□□ 0.51
TOP3A-202ENST00000461127 BBS2Q9BXC9 721 aa18.25■□□□□ 0.51
TOP3A-202ENST00000461127 INTS13Q9NVM9 706 aa18.25■□□□□ 0.51
TOP3A-202ENST00000461127 PCDHB13Q9Y5F0 798 aa18.25■□□□□ 0.51
TOP3A-202ENST00000461127 KNL1Q8NG31 2342 aa18.24■□□□□ 0.51
TOP3A-202ENST00000461127 ATXN7O15265 892 aaPredicted RBP18.24■□□□□ 0.51
TOP3A-202ENST00000461127 CACNG3O60359 315 aa18.24■□□□□ 0.51
TOP3A-202ENST00000461127 GCNT3O95395 438 aa18.24■□□□□ 0.51
TOP3A-202ENST00000461127 TYRP14679 529 aa18.24■□□□□ 0.51
TOP3A-202ENST00000461127 GAP43P17677 238 aa18.24■□□□□ 0.51
TOP3A-202ENST00000461127 OXTRP30559 389 aa18.24■□□□□ 0.51
TOP3A-202ENST00000461127 KCNA1Q09470 495 aa18.24■□□□□ 0.51
TOP3A-202ENST00000461127 CAMK2BQ13554 666 aa18.24■□□□□ 0.51
TOP3A-202ENST00000461127 SURF1Q15526 300 aa18.24■□□□□ 0.51
TOP3A-202ENST00000461127 DCAF12L1Q5VU92 463 aa18.24■□□□□ 0.51
TOP3A-202ENST00000461127 DBX2Q6ZNG2 339 aa18.24■□□□□ 0.51
TOP3A-202ENST00000461127 DYMQ7RTS9 669 aa18.24■□□□□ 0.51
TOP3A-202ENST00000461127 ZNF605Q86T29 641 aa18.24■□□□□ 0.51
TOP3A-202ENST00000461127 MARCH9Q86YJ5 346 aa18.24■□□□□ 0.51
TOP3A-202ENST00000461127 LSM14AQ8ND56 463 aaKnown RBP18.24■□□□□ 0.51
TOP3A-202ENST00000461127 OR6B3Q8NGW1 331 aa18.24■□□□□ 0.51
TOP3A-202ENST00000461127 STRA6Q9BX79 667 aa18.24■□□□□ 0.51
TOP3A-202ENST00000461127 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.24■□□□□ 0.51
TOP3A-202ENST00000461127 CHORDC1Q9UHD1 332 aaPredicted RBP18.24■□□□□ 0.51
TOP3A-202ENST00000461127 FAM149AA5PLN7 773 aa18.23■□□□□ 0.51
TOP3A-202ENST00000461127 PRRT4C9JH25 899 aa18.23■□□□□ 0.51
TOP3A-202ENST00000461127 TNFSF14O43557 240 aa18.23■□□□□ 0.51
TOP3A-202ENST00000461127 PRPF6O94906 941 aaKnown RBP18.23■□□□□ 0.51
TOP3A-202ENST00000461127 HLA-EP13747 358 aa18.23■□□□□ 0.51
TOP3A-202ENST00000461127 PTPN1P18031 435 aaKnown RBP18.23■□□□□ 0.51
TOP3A-202ENST00000461127 LONP1P36776 959 aaKnown RBP18.23■□□□□ 0.51
TOP3A-202ENST00000461127 ZNF132P52740 706 aa18.23■□□□□ 0.51
TOP3A-202ENST00000461127 DUOXA2Q1HG44 320 aa18.23■□□□□ 0.51
TOP3A-202ENST00000461127 SNX30Q5VWJ9 437 aa18.23■□□□□ 0.51
TOP3A-202ENST00000461127 LRRC69Q6ZNQ3 347 aa18.23■□□□□ 0.51
TOP3A-202ENST00000461127 ZNF518BQ9C0D4 1074 aa18.23■□□□□ 0.51
TOP3A-202ENST00000461127 CCSER2Q9H7U1 834 aa18.23■□□□□ 0.51
TOP3A-202ENST00000461127 ITM2CQ9NQX7 267 aa18.23■□□□□ 0.51
TOP3A-202ENST00000461127 USP36Q9P275 1121 aaKnown RBP18.23■□□□□ 0.51
TOP3A-202ENST00000461127 ATP8B3O60423 1300 aa18.23■□□□□ 0.51
TOP3A-202ENST00000461127 METTL12A8MUP2 240 aa18.22■□□□□ 0.51
TOP3A-202ENST00000461127 KIAA0391O15091 583 aaKnown RBP18.22■□□□□ 0.51
TOP3A-202ENST00000461127 TACC1O75410 805 aa18.22■□□□□ 0.51
TOP3A-202ENST00000461127 C1QL1O75973 258 aa18.22■□□□□ 0.51
TOP3A-202ENST00000461127 FAM163BP0C2L3 166 aa18.22■□□□□ 0.51
TOP3A-202ENST00000461127 PLA2G2AP14555 144 aa18.22■□□□□ 0.51
TOP3A-202ENST00000461127 DGKGP49619 791 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms