RNA–Protein interactions for RNA: ENST00000460627.5

CHRD-208, Transcript of chordin, humanhuman

TSL 2

Gene CHRD, Length 4,719 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-208ENST00000460627 ULBP1Q9BZM6 244 aa18.27■□□□□ 0.52
CHRD-208ENST00000460627 SLC13A4Q9UKG4 626 aa18.27■□□□□ 0.52
CHRD-208ENST00000460627 SHOC2Q9UQ13 582 aa18.27■□□□□ 0.52
CHRD-208ENST00000460627 MAFBQ9Y5Q3 323 aaPredicted RBP18.27■□□□□ 0.52
CHRD-208ENST00000460627 SF3B1O75533 1304 aaKnown RBP eCLIP18.27■□□□□ 0.51
CHRD-208ENST00000460627 SOWAHBA6NEL2 793 aa18.27■□□□□ 0.51
CHRD-208ENST00000460627 NOS2P35228 1153 aa18.27■□□□□ 0.51
CHRD-208ENST00000460627 SLC39A12Q504Y0 691 aa18.27■□□□□ 0.51
CHRD-208ENST00000460627 C18orf25Q96B23 403 aaPredicted RBP18.27■□□□□ 0.51
CHRD-208ENST00000460627 MRGBPQ9NV56 204 aa18.27■□□□□ 0.51
CHRD-208ENST00000460627 ARHGAP28Q9P2N2 729 aa18.27■□□□□ 0.51
CHRD-208ENST00000460627 SIGLEC16A6NMB1 481 aa18.26■□□□□ 0.51
CHRD-208ENST00000460627 MIPP30301 263 aa18.26■□□□□ 0.51
CHRD-208ENST00000460627 HDAC4P56524 1084 aa18.26■□□□□ 0.51
CHRD-208ENST00000460627 DMTNQ08495 405 aa18.26■□□□□ 0.51
CHRD-208ENST00000460627 NPY5RQ15761 445 aa18.26■□□□□ 0.51
CHRD-208ENST00000460627 AARS2Q5JTZ9 985 aaKnown RBP18.26■□□□□ 0.51
CHRD-208ENST00000460627 RETSATQ6NUM9 610 aa18.26■□□□□ 0.51
CHRD-208ENST00000460627 CAPNS2Q96L46 248 aa18.26■□□□□ 0.51
CHRD-208ENST00000460627 MBOAT7Q96N66 472 aa18.26■□□□□ 0.51
CHRD-208ENST00000460627 XPO6Q96QU8 1125 aaKnown RBP18.26■□□□□ 0.51
CHRD-208ENST00000460627 ALG13Q9NP73 1137 aaKnown RBP18.26■□□□□ 0.51
CHRD-208ENST00000460627 ARL2BPQ9Y2Y0 163 aa18.26■□□□□ 0.51
CHRD-208ENST00000460627 TMEM120BA0PK00 339 aa18.26■□□□□ 0.51
CHRD-208ENST00000460627 TTLL13PA6NNM8 815 aa18.26■□□□□ 0.51
CHRD-208ENST00000460627 EIF3HO15372 352 aaKnown RBP eCLIP18.26■□□□□ 0.519e-8■■■□□ 16.6
CHRD-208ENST00000460627 NPR3P17342 541 aa18.26■□□□□ 0.51
CHRD-208ENST00000460627 KLRC2P26717 231 aa18.26■□□□□ 0.51
CHRD-208ENST00000460627 CD52P31358 61 aa18.26■□□□□ 0.51
CHRD-208ENST00000460627 ZRANB3Q5FWF4 1079 aa18.26■□□□□ 0.51
CHRD-208ENST00000460627 DDIASQ8IXT1 998 aa18.26■□□□□ 0.51
CHRD-208ENST00000460627 PGBD3Q8N328 593 aa18.26■□□□□ 0.51
CHRD-208ENST00000460627 ZNF558Q96NG5 402 aa18.26■□□□□ 0.51
CHRD-208ENST00000460627 PNKPQ96T60 521 aa18.26■□□□□ 0.51
CHRD-208ENST00000460627 FAM105AQ9NUU6 356 aa18.26■□□□□ 0.51
CHRD-208ENST00000460627 CRLS1Q9UJA2 301 aa18.26■□□□□ 0.51
CHRD-208ENST00000460627 PHRF1Q9P1Y6 1649 aaKnown RBP18.26■□□□□ 0.51
CHRD-208ENST00000460627 CCDC130P13994 396 aa18.26■□□□□ 0.51
CHRD-208ENST00000460627 EFTUD2Q15029 972 aaKnown RBP eCLIP18.26■□□□□ 0.512e-6■■■■□ 23.8
CHRD-208ENST00000460627 TSR3Q9UJK0 312 aaKnown RBP18.26■□□□□ 0.51
CHRD-208ENST00000460627 TRIM49D1C9J1S8 452 aa18.25■□□□□ 0.51
CHRD-208ENST00000460627 B4GALT4O60513 344 aa18.25■□□□□ 0.51
CHRD-208ENST00000460627 GJB1P08034 283 aa18.25■□□□□ 0.51
CHRD-208ENST00000460627 MYL2P10916 166 aa18.25■□□□□ 0.51
CHRD-208ENST00000460627 HMOX2P30519 316 aa18.25■□□□□ 0.51
CHRD-208ENST00000460627 ITGA7Q13683 1181 aa18.25■□□□□ 0.51
CHRD-208ENST00000460627 MFSD7Q6UXD7 560 aa18.25■□□□□ 0.51
CHRD-208ENST00000460627 BLOC1S5Q8TDH9 187 aa18.25■□□□□ 0.51
CHRD-208ENST00000460627 DCLK3Q9C098 648 aa18.25■□□□□ 0.51
CHRD-208ENST00000460627 DRG1Q9Y295 367 aaKnown RBP18.25■□□□□ 0.51
CHRD-208ENST00000460627 RAMP2O60895 175 aa18.25■□□□□ 0.51
CHRD-208ENST00000460627 MYL4P12829 197 aa18.25■□□□□ 0.51
CHRD-208ENST00000460627 DDX5P17844 614 aaKnown RBP18.25■□□□□ 0.51
CHRD-208ENST00000460627 MTFR1Q15390 333 aa18.25■□□□□ 0.51
CHRD-208ENST00000460627 TTLL9Q3SXZ7 439 aa18.25■□□□□ 0.51
CHRD-208ENST00000460627 CARNMT1Q8N4J0 409 aa18.25■□□□□ 0.51
CHRD-208ENST00000460627 EPB41L3Q9Y2J2 1087 aaPredicted RBP18.25■□□□□ 0.51
CHRD-208ENST00000460627 TIMM44O43615 452 aa18.25■□□□□ 0.51
CHRD-208ENST00000460627 APOA4P06727 396 aa18.25■□□□□ 0.51
CHRD-208ENST00000460627 PYGMP11217 842 aa18.25■□□□□ 0.51
CHRD-208ENST00000460627 GRK4P32298 578 aa18.25■□□□□ 0.51
CHRD-208ENST00000460627 CYP2C18P33260 490 aa18.25■□□□□ 0.51
CHRD-208ENST00000460627 HADHAP40939 763 aa18.25■□□□□ 0.51
CHRD-208ENST00000460627 GRIK3Q13003 919 aa18.25■□□□□ 0.51
CHRD-208ENST00000460627 MARC1Q5VT66 337 aa18.25■□□□□ 0.51
CHRD-208ENST00000460627 LRRC38Q5VT99 294 aa18.25■□□□□ 0.51
CHRD-208ENST00000460627 TRIM68Q6AZZ1 485 aa18.25■□□□□ 0.51
CHRD-208ENST00000460627 DENND1BQ6P3S1 775 aa18.25■□□□□ 0.51
CHRD-208ENST00000460627 TMEM199Q8N511 208 aa18.25■□□□□ 0.51
CHRD-208ENST00000460627 FBXO36Q8NEA4 188 aa18.25■□□□□ 0.51
CHRD-208ENST00000460627 SLC25A13Q9UJS0 675 aa18.25■□□□□ 0.51
CHRD-208ENST00000460627 RENBPP51606 427 aa18.25■□□□□ 0.51
CHRD-208ENST00000460627 LBRQ14739 615 aaKnown RBP18.25■□□□□ 0.51
CHRD-208ENST00000460627 PABPC1LQ4VXU2 614 aaKnown RBP18.25■□□□□ 0.51
CHRD-208ENST00000460627 KATNAL2Q8IYT4 538 aa18.25■□□□□ 0.51
CHRD-208ENST00000460627 PDZD8Q8NEN9 1154 aa18.25■□□□□ 0.51
CHRD-208ENST00000460627 WNT8BQ93098 351 aa18.25■□□□□ 0.51
CHRD-208ENST00000460627 PRMT1Q99873 361 aaKnown RBP18.25■□□□□ 0.51
CHRD-208ENST00000460627 ABCC13Q9NSE7 274 aa18.25■□□□□ 0.51
CHRD-208ENST00000460627 RBM22Q9NW64 420 aaKnown RBP eCLIP18.25■□□□□ 0.511e-28■■□□□ 13.9
CHRD-208ENST00000460627 SLC39A10Q9ULF5 831 aa18.25■□□□□ 0.51
CHRD-208ENST00000460627 LUC7L3O95232 432 aaKnown RBP18.24■□□□□ 0.51
CHRD-208ENST00000460627 ANP32DO95626 131 aa18.24■□□□□ 0.51
CHRD-208ENST00000460627 KRT4P19013 534 aa18.24■□□□□ 0.51
CHRD-208ENST00000460627 RBBP7Q16576 425 aa18.24■□□□□ 0.51
CHRD-208ENST00000460627 ANKRD52Q8NB46 1076 aa18.24■□□□□ 0.51
CHRD-208ENST00000460627 EPN3Q9H201 632 aa18.24■□□□□ 0.51
CHRD-208ENST00000460627 RBPJLQ9UBG7 517 aa18.24■□□□□ 0.51
CHRD-208ENST00000460627 NR2E3Q9Y5X4 410 aa18.24■□□□□ 0.51
CHRD-208ENST00000460627 EPHB6O15197 1021 aa18.24■□□□□ 0.51
CHRD-208ENST00000460627 SFSWAPQ12872 951 aaKnown RBP18.24■□□□□ 0.51
CHRD-208ENST00000460627 ANGPTL8Q6UXH0 198 aa18.24■□□□□ 0.51
CHRD-208ENST00000460627 B3GALNT2Q8NCR0 500 aa18.24■□□□□ 0.51
CHRD-208ENST00000460627 N4BP2L2Q92802 583 aaPredicted RBP18.24■□□□□ 0.51
CHRD-208ENST00000460627 OPHN1O60890 802 aa18.24■□□□□ 0.51
CHRD-208ENST00000460627 LMNAP02545 664 aaKnown RBP18.24■□□□□ 0.51
CHRD-208ENST00000460627 ARL2P36404 184 aa18.24■□□□□ 0.51
CHRD-208ENST00000460627 RHOAP61586 193 aa18.24■□□□□ 0.51
CHRD-208ENST00000460627 FAM83EQ2M2I3 478 aa18.24■□□□□ 0.51
CHRD-208ENST00000460627 MROH9Q5TGP6 573 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms