RNA–Protein interactions for RNA: ENST00000460569.1

UPF2-204, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

TSL 2

Gene UPF2, Length 640 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-204ENST00000460569 TAF5Q15542 800 aa10.66□□□□□ -0.7
UPF2-204ENST00000460569 TEAD2Q15562 447 aa10.66□□□□□ -0.7
UPF2-204ENST00000460569 C10orf76Q5T2E6 689 aa10.66□□□□□ -0.7
UPF2-204ENST00000460569 STXBP5Q5T5C0 1151 aa10.66□□□□□ -0.7
UPF2-204ENST00000460569 GPR158Q5T848 1215 aa10.66□□□□□ -0.7
UPF2-204ENST00000460569 BSPRYQ5W0U4 402 aa10.66□□□□□ -0.7
UPF2-204ENST00000460569 BTBD8Q5XKL5 378 aa10.66□□□□□ -0.7
UPF2-204ENST00000460569 RSRC2Q7L4I2 434 aaKnown RBP10.66□□□□□ -0.7
UPF2-204ENST00000460569 SLC26A9Q7LBE3 791 aa10.66□□□□□ -0.7
UPF2-204ENST00000460569 KIAA1328Q86T90 577 aa10.66□□□□□ -0.7
UPF2-204ENST00000460569 ITFG1Q8TB96 612 aa10.66□□□□□ -0.7
UPF2-204ENST00000460569 EDEM1Q92611 657 aa10.66□□□□□ -0.7
UPF2-204ENST00000460569 ARHGEF26Q96DR7 871 aa10.66□□□□□ -0.7
UPF2-204ENST00000460569 NECTIN4Q96NY8 510 aa10.66□□□□□ -0.7
UPF2-204ENST00000460569 MCEEQ96PE7 176 aa10.66□□□□□ -0.7
UPF2-204ENST00000460569 TRIM62Q9BVG3 475 aa10.66□□□□□ -0.7
UPF2-204ENST00000460569 SLITRK6Q9H5Y7 841 aa10.66□□□□□ -0.7
UPF2-204ENST00000460569 WDR6Q9NNW5 1121 aaKnown RBP10.66□□□□□ -0.7
UPF2-204ENST00000460569 AVENQ9NQS1 362 aaPredicted RBP10.66□□□□□ -0.7
UPF2-204ENST00000460569 ABCC13Q9NSE7 274 aa10.66□□□□□ -0.7
UPF2-204ENST00000460569 ASNSD1Q9NWL6 643 aa10.66□□□□□ -0.7
UPF2-204ENST00000460569 OSER1Q9NX31 292 aa10.66□□□□□ -0.7
UPF2-204ENST00000460569 COG5Q9UP83 839 aa10.66□□□□□ -0.7
UPF2-204ENST00000460569 USP15Q9Y4E8 981 aaPredicted RBP10.66□□□□□ -0.7
UPF2-204ENST00000460569 PCDHA13Q9Y5I0 950 aa10.66□□□□□ -0.7
UPF2-204ENST00000460569 SCINQ9Y6U3 715 aa10.66□□□□□ -0.7
UPF2-204ENST00000460569 TCRBV5S1A1TA0A578 114 aa10.65□□□□□ -0.7
UPF2-204ENST00000460569 C2orf78A6NCI8 922 aa10.65□□□□□ -0.7
UPF2-204ENST00000460569 GRXCR2A6NFK2 248 aa10.65□□□□□ -0.7
UPF2-204ENST00000460569 NRG2O14511 850 aaPredicted RBP10.65□□□□□ -0.7
UPF2-204ENST00000460569 MBTPS2O43462 519 aa10.65□□□□□ -0.7
UPF2-204ENST00000460569 TLR5O60602 858 aa10.65□□□□□ -0.7
UPF2-204ENST00000460569 MOSPD3O75425 235 aa10.65□□□□□ -0.7
UPF2-204ENST00000460569 GLI1P08151 1106 aa10.65□□□□□ -0.7
UPF2-204ENST00000460569 ZDHHC11BP0C7U3 371 aa10.65□□□□□ -0.7
UPF2-204ENST00000460569 KRT3P12035 628 aa10.65□□□□□ -0.7
UPF2-204ENST00000460569 NCAM1P13591 858 aa10.65□□□□□ -0.7
UPF2-204ENST00000460569 RARGP13631 454 aa10.65□□□□□ -0.7
UPF2-204ENST00000460569 YWHAZP63104 245 aaKnown RBP10.65□□□□□ -0.7
UPF2-204ENST00000460569 GPC5P78333 572 aa10.65□□□□□ -0.7
UPF2-204ENST00000460569 CBX2Q14781 532 aaPredicted RBP10.65□□□□□ -0.7
UPF2-204ENST00000460569 C10orf120Q5SQS8 335 aa10.65□□□□□ -0.7
UPF2-204ENST00000460569 HECTD3Q5T447 861 aa10.65□□□□□ -0.7
UPF2-204ENST00000460569 SNX30Q5VWJ9 437 aa10.65□□□□□ -0.7
UPF2-204ENST00000460569 TXNDC8Q6A555 127 aa10.65□□□□□ -0.7
UPF2-204ENST00000460569 PLEKHA7Q6IQ23 1121 aa10.65□□□□□ -0.7
UPF2-204ENST00000460569 DCUN1D2Q6PH85 259 aa10.65□□□□□ -0.7
UPF2-204ENST00000460569 DEFB106AQ8N104 65 aa10.65□□□□□ -0.7
UPF2-204ENST00000460569 EMC1Q8N766 993 aa10.65□□□□□ -0.7
UPF2-204ENST00000460569 MAB21L3Q8N8X9 362 aa10.65□□□□□ -0.7
UPF2-204ENST00000460569 JOSD2Q8TAC2 188 aa10.65□□□□□ -0.7
UPF2-204ENST00000460569 RNF139Q8WU17 664 aa10.65□□□□□ -0.7
UPF2-204ENST00000460569 CDK5RAP1Q96SZ6 601 aaKnown RBP10.65□□□□□ -0.7
UPF2-204ENST00000460569 NACA2Q9H009 215 aa10.65□□□□□ -0.7
UPF2-204ENST00000460569 POMKQ9H5K3 350 aa10.65□□□□□ -0.7
UPF2-204ENST00000460569 CCSER2Q9H7U1 834 aa10.65□□□□□ -0.7
UPF2-204ENST00000460569 POPDC2Q9HBU9 364 aa10.65□□□□□ -0.7
UPF2-204ENST00000460569 PARVAQ9NVD7 372 aa10.65□□□□□ -0.7
UPF2-204ENST00000460569 MTPAPQ9NVV4 582 aaKnown RBP eCLIP10.65□□□□□ -0.7
UPF2-204ENST00000460569 CLIC5Q9NZA1 410 aa10.65□□□□□ -0.7
UPF2-204ENST00000460569 CTTNBP2NLQ9P2B4 639 aa10.65□□□□□ -0.7
UPF2-204ENST00000460569 NUDT5Q9UKK9 219 aa10.65□□□□□ -0.7
UPF2-204ENST00000460569 INTUQ9ULD6 942 aa10.65□□□□□ -0.7
UPF2-204ENST00000460569 REXO2Q9Y3B8 237 aaKnown RBP10.65□□□□□ -0.7
UPF2-204ENST00000460569 REV3LO60673 3130 aa10.65□□□□□ -0.7
UPF2-204ENST00000460569 DOCK8Q8NF50 2099 aa10.65□□□□□ -0.7
UPF2-204ENST00000460569 TRAV19A0A0A6YYK7 116 aa10.64□□□□□ -0.71
UPF2-204ENST00000460569 SIGLEC16A6NMB1 481 aa10.64□□□□□ -0.71
UPF2-204ENST00000460569 MDM4O15151 490 aa10.64□□□□□ -0.71
UPF2-204ENST00000460569 OAS1P00973 400 aaKnown RBP10.64□□□□□ -0.71
UPF2-204ENST00000460569 CYP1A2P05177 515 aa10.64□□□□□ -0.71
UPF2-204ENST00000460569 CKMP06732 381 aa10.64□□□□□ -0.71
UPF2-204ENST00000460569 DDX6P26196 483 aaKnown RBP eCLIP10.64□□□□□ -0.71
UPF2-204ENST00000460569 FLT3P36888 993 aa10.64□□□□□ -0.71
UPF2-204ENST00000460569 TUBP50607 506 aa10.64□□□□□ -0.71
UPF2-204ENST00000460569 VAV2P52735 878 aa10.64□□□□□ -0.71
UPF2-204ENST00000460569 EFEMP1Q12805 493 aa10.64□□□□□ -0.71
UPF2-204ENST00000460569 MAMLD1Q13495 774 aa10.64□□□□□ -0.71
UPF2-204ENST00000460569 DCAF6Q58WW2 860 aa10.64□□□□□ -0.71
UPF2-204ENST00000460569 PPP1R15BQ5SWA1 713 aa10.64□□□□□ -0.71
UPF2-204ENST00000460569 TADA2BQ86TJ2 420 aa10.64□□□□□ -0.71
UPF2-204ENST00000460569 NPAS3Q8IXF0 933 aa10.64□□□□□ -0.71
UPF2-204ENST00000460569 TXLNBQ8N3L3 684 aa10.64□□□□□ -0.71
UPF2-204ENST00000460569 RFFLQ8WZ73 363 aa10.64□□□□□ -0.71
UPF2-204ENST00000460569 SUSD6Q92537 303 aa10.64□□□□□ -0.71
UPF2-204ENST00000460569 KHSRPQ92945 711 aaKnown RBP eCLIP10.64□□□□□ -0.71
UPF2-204ENST00000460569 SLC2A13Q96QE2 648 aa10.64□□□□□ -0.71
UPF2-204ENST00000460569 NUP85Q9BW27 656 aa10.64□□□□□ -0.71
UPF2-204ENST00000460569 TASP1Q9H6P5 420 aa10.64□□□□□ -0.71
UPF2-204ENST00000460569 MRPL47Q9HD33 250 aaKnown RBP10.64□□□□□ -0.71
UPF2-204ENST00000460569 PRDM6Q9NQX0 595 aa10.64□□□□□ -0.71
UPF2-204ENST00000460569 OLA1Q9NTK5 396 aaKnown RBP10.64□□□□□ -0.71
UPF2-204ENST00000460569 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP10.64□□□□□ -0.71
UPF2-204ENST00000460569 RASAL2Q9UJF2 1139 aa10.64□□□□□ -0.71
UPF2-204ENST00000460569 TMEM59LQ9UK28 342 aa10.64□□□□□ -0.71
UPF2-204ENST00000460569 TFR2Q9UP52 801 aa10.64□□□□□ -0.71
UPF2-204ENST00000460569 NAALADL1Q9UQQ1 740 aa10.64□□□□□ -0.71
UPF2-204ENST00000460569 ADGRG1Q9Y653 693 aa10.64□□□□□ -0.71
UPF2-204ENST00000460569 RCCD1A6NED2 376 aa10.63□□□□□ -0.71
UPF2-204ENST00000460569 COCHO43405 550 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms