RNA–Protein interactions for RNA: ENST00000457924.2

UPF3AP2-201, Transcript of UPF3A pseudogene 2, humanhuman

BASIC

Gene UPF3AP2, Length 1,132 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3AP2-201ENST00000457924 SRPRBQ9Y5M8 271 aaKnown RBP15.24■□□□□ 0.03
UPF3AP2-201ENST00000457924 CLIC4Q9Y696 253 aa15.24■□□□□ 0.03
UPF3AP2-201ENST00000457924 PCDH15Q96QU1 1955 aa15.24■□□□□ 0.03
UPF3AP2-201ENST00000457924 HOXC11O43248 304 aaPredicted RBP15.23■□□□□ 0.03
UPF3AP2-201ENST00000457924 COCHO43405 550 aa15.23■□□□□ 0.03
UPF3AP2-201ENST00000457924 ZNF217O75362 1048 aa15.23■□□□□ 0.03
UPF3AP2-201ENST00000457924 CACNA2D1P54289 1103 aa15.23■□□□□ 0.03
UPF3AP2-201ENST00000457924 TNNC1P63316 161 aa15.23■□□□□ 0.03
UPF3AP2-201ENST00000457924 HECTD3Q5T447 861 aa15.23■□□□□ 0.03
UPF3AP2-201ENST00000457924 SDE2Q6IQ49 451 aa15.23■□□□□ 0.03
UPF3AP2-201ENST00000457924 CCDC65Q8IXS2 484 aa15.23■□□□□ 0.03
UPF3AP2-201ENST00000457924 CHCHD4Q8N4Q1 142 aa15.23■□□□□ 0.03
UPF3AP2-201ENST00000457924 CLIC6Q96NY7 704 aa15.23■□□□□ 0.03
UPF3AP2-201ENST00000457924 ZNF518BQ9C0D4 1074 aa15.23■□□□□ 0.03
UPF3AP2-201ENST00000457924 HSPBP1Q9NZL4 362 aa15.23■□□□□ 0.03
UPF3AP2-201ENST00000457924 NME7Q9Y5B8 376 aa15.23■□□□□ 0.03
UPF3AP2-201ENST00000457924 ZZEF1O43149 2961 aa15.23■□□□□ 0.03
UPF3AP2-201ENST00000457924 AKAP13Q12802 2813 aa15.22■□□□□ 0.03
UPF3AP2-201ENST00000457924 A8MXQ7 604 aa15.22■□□□□ 0.03
UPF3AP2-201ENST00000457924 CLDN5O00501 218 aa15.22■□□□□ 0.03
UPF3AP2-201ENST00000457924 CD2BP2O95400 341 aaKnown RBP15.22■□□□□ 0.03
UPF3AP2-201ENST00000457924 CST3P01034 146 aaPredicted RBP15.22■□□□□ 0.03
UPF3AP2-201ENST00000457924 DLATP10515 647 aaKnown RBP15.22■□□□□ 0.03
UPF3AP2-201ENST00000457924 TNNI1P19237 187 aa15.22■□□□□ 0.03
UPF3AP2-201ENST00000457924 NTSR1P30989 418 aa15.22■□□□□ 0.03
UPF3AP2-201ENST00000457924 FAM193AP78312 1265 aa15.22■□□□□ 0.03
UPF3AP2-201ENST00000457924 WDR72Q3MJ13 1102 aa15.22■□□□□ 0.03
UPF3AP2-201ENST00000457924 ERICH6BQ5W0A0 696 aa15.22■□□□□ 0.03
UPF3AP2-201ENST00000457924 PROSER1Q86XN7 944 aa15.22■□□□□ 0.03
UPF3AP2-201ENST00000457924 BBS7Q8IWZ6 715 aa15.22■□□□□ 0.03
UPF3AP2-201ENST00000457924 TERB1Q8NA31 727 aa15.22■□□□□ 0.03
UPF3AP2-201ENST00000457924 B3GNT5Q9BYG0 378 aa15.22■□□□□ 0.03
UPF3AP2-201ENST00000457924 NACA2Q9H009 215 aa15.22■□□□□ 0.03
UPF3AP2-201ENST00000457924 DPEP3Q9H4B8 488 aa15.22■□□□□ 0.03
UPF3AP2-201ENST00000457924 SPHK2Q9NRA0 654 aa15.22■□□□□ 0.03
UPF3AP2-201ENST00000457924 TMEM30AQ9NV96 361 aa15.22■□□□□ 0.03
UPF3AP2-201ENST00000457924 DNAAF2Q9NVR5 837 aaKnown RBP15.22■□□□□ 0.03
UPF3AP2-201ENST00000457924 CHORDC1Q9UHD1 332 aaPredicted RBP15.22■□□□□ 0.03
UPF3AP2-201ENST00000457924 PCDHB9Q9Y5E1 797 aa15.22■□□□□ 0.03
UPF3AP2-201ENST00000457924 ATP8B3O60423 1300 aa15.21■□□□□ 0.03
UPF3AP2-201ENST00000457924 IGHV1OR15-9A0A0B4J2B8 117 aa15.21■□□□□ 0.03
UPF3AP2-201ENST00000457924 A0A1W2PQD8 194 aa15.21■□□□□ 0.03
UPF3AP2-201ENST00000457924 VPS37CA5D8V6 355 aaPredicted RBP15.21■□□□□ 0.03
UPF3AP2-201ENST00000457924 CD59P13987 128 aa15.21■□□□□ 0.03
UPF3AP2-201ENST00000457924 WASP42768 502 aa15.21■□□□□ 0.03
UPF3AP2-201ENST00000457924 GCGRP47871 477 aa15.21■□□□□ 0.03
UPF3AP2-201ENST00000457924 TUBP50607 506 aa15.21■□□□□ 0.03
UPF3AP2-201ENST00000457924 SLC14A1Q13336 389 aa15.21■□□□□ 0.03
UPF3AP2-201ENST00000457924 TRIP6Q15654 476 aaKnown RBP15.21■□□□□ 0.03
UPF3AP2-201ENST00000457924 RAB44Q7Z6P3 723 aaPredicted RBP15.21■□□□□ 0.03
UPF3AP2-201ENST00000457924 TMEM25Q86YD3 366 aa15.21■□□□□ 0.03
UPF3AP2-201ENST00000457924 TRIML1Q8N9V2 468 aa15.21■□□□□ 0.03
UPF3AP2-201ENST00000457924 B3GALNT2Q8NCR0 500 aa15.21■□□□□ 0.03
UPF3AP2-201ENST00000457924 OR2I1PQ8NGU4 316 aa15.21■□□□□ 0.03
UPF3AP2-201ENST00000457924 DUSP9Q99956 384 aaKnown RBP15.21■□□□□ 0.03
UPF3AP2-201ENST00000457924 PANK2Q9BZ23 570 aa15.21■□□□□ 0.03
UPF3AP2-201ENST00000457924 STARD13Q9Y3M8 1113 aa15.21■□□□□ 0.03
UPF3AP2-201ENST00000457924 WDFY3Q8IZQ1 3526 aa15.21■□□□□ 0.03
UPF3AP2-201ENST00000457924 ADAMTS20P59510 1910 aa15.2■□□□□ 0.02
UPF3AP2-201ENST00000457924 A0A1W2PQF6 199 aa15.2■□□□□ 0.02
UPF3AP2-201ENST00000457924 TAF4O00268 1085 aa15.2■□□□□ 0.02
UPF3AP2-201ENST00000457924 NDUFS2O75306 463 aa15.2■□□□□ 0.02
UPF3AP2-201ENST00000457924 IRF1P10914 325 aa15.2■□□□□ 0.02
UPF3AP2-201ENST00000457924 TRPC3Q13507 836 aa15.2■□□□□ 0.02
UPF3AP2-201ENST00000457924 SNRNP35Q16560 246 aaKnown RBP15.2■□□□□ 0.02
UPF3AP2-201ENST00000457924 PLEKHG6Q3KR16 790 aa15.2■□□□□ 0.02
UPF3AP2-201ENST00000457924 C8orf34Q49A92 452 aa15.2■□□□□ 0.02
UPF3AP2-201ENST00000457924 SYCP2LQ5T4T6 812 aa15.2■□□□□ 0.02
UPF3AP2-201ENST00000457924 SNX30Q5VWJ9 437 aa15.2■□□□□ 0.02
UPF3AP2-201ENST00000457924 GRAMD4Q6IC98 578 aa15.2■□□□□ 0.02
UPF3AP2-201ENST00000457924 SLC41A1Q8IVJ1 513 aa15.2■□□□□ 0.02
UPF3AP2-201ENST00000457924 CHPFQ8IZ52 775 aa15.2■□□□□ 0.02
UPF3AP2-201ENST00000457924 RGL4Q8IZJ4 473 aa15.2■□□□□ 0.02
UPF3AP2-201ENST00000457924 SCAMP5Q8TAC9 235 aa15.2■□□□□ 0.02
UPF3AP2-201ENST00000457924 HSPA12BQ96MM6 686 aa15.2■□□□□ 0.02
UPF3AP2-201ENST00000457924 XPO6Q96QU8 1125 aaKnown RBP15.2■□□□□ 0.02
UPF3AP2-201ENST00000457924 KCNK16Q96T55 309 aa15.2■□□□□ 0.02
UPF3AP2-201ENST00000457924 CGRRF1Q99675 332 aa15.2■□□□□ 0.02
UPF3AP2-201ENST00000457924 MED10Q9BTT4 135 aa15.2■□□□□ 0.02
UPF3AP2-201ENST00000457924 FAM124BQ9H5Z6 455 aaPredicted RBP15.2■□□□□ 0.02
UPF3AP2-201ENST00000457924 CCSER2Q9H7U1 834 aa15.2■□□□□ 0.02
UPF3AP2-201ENST00000457924 DNAJC17Q9NVM6 304 aaKnown RBP15.2■□□□□ 0.02
UPF3AP2-201ENST00000457924 NXF1Q9UBU9 619 aaKnown RBP15.2■□□□□ 0.02
UPF3AP2-201ENST00000457924 SUSD2Q9UGT4 822 aa15.2■□□□□ 0.02
UPF3AP2-201ENST00000457924 CYP8B1Q9UNU6 501 aa15.2■□□□□ 0.02
UPF3AP2-201ENST00000457924 TRIM24O15164 1050 aa15.19■□□□□ 0.02
UPF3AP2-201ENST00000457924 SH3BP5O60239 455 aa15.19■□□□□ 0.02
UPF3AP2-201ENST00000457924 GNSP15586 552 aa15.19■□□□□ 0.02
UPF3AP2-201ENST00000457924 NDUFV2P19404 249 aa15.19■□□□□ 0.02
UPF3AP2-201ENST00000457924 SLC5A3P53794 718 aa15.19■□□□□ 0.02
UPF3AP2-201ENST00000457924 CEBPZQ03701 1054 aaKnown RBP15.19■□□□□ 0.02
UPF3AP2-201ENST00000457924 PSMD6Q15008 389 aa15.19■□□□□ 0.02
UPF3AP2-201ENST00000457924 KMT5BQ4FZB7 885 aa15.19■□□□□ 0.02
UPF3AP2-201ENST00000457924 EGFLAMQ63HQ2 1017 aa15.19■□□□□ 0.02
UPF3AP2-201ENST00000457924 MIB1Q86YT6 1006 aa15.19■□□□□ 0.02
UPF3AP2-201ENST00000457924 GLIS3Q8NEA6 775 aa15.19■□□□□ 0.02
UPF3AP2-201ENST00000457924 IPO4Q8TEX9 1081 aaKnown RBP15.19■□□□□ 0.02
UPF3AP2-201ENST00000457924 SCFD1Q8WVM8 642 aa15.19■□□□□ 0.02
UPF3AP2-201ENST00000457924 CCDC127Q96BQ5 260 aa15.19■□□□□ 0.02
UPF3AP2-201ENST00000457924 ZNF419Q96HQ0 510 aaPredicted RBP15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms