RNA–Protein interactions for RNA: ENST00000457889.1

CDC42EP3-204, Transcript of CDC42 effector protein 3, humanhuman

TSL 2

Gene CDC42EP3, Length 997 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-204ENST00000457889 KRT1P04264 644 aa9.31□□□□□ -0.92
CDC42EP3-204ENST00000457889 HAPLN1P10915 354 aaPredicted RBP9.31□□□□□ -0.92
CDC42EP3-204ENST00000457889 PYGMP11217 842 aa9.31□□□□□ -0.92
CDC42EP3-204ENST00000457889 CYP2F1P24903 491 aa9.31□□□□□ -0.92
CDC42EP3-204ENST00000457889 MIPP30301 263 aa9.31□□□□□ -0.92
CDC42EP3-204ENST00000457889 RDXP35241 583 aaKnown RBP9.31□□□□□ -0.92
CDC42EP3-204ENST00000457889 PBX3P40426 434 aa9.31□□□□□ -0.92
CDC42EP3-204ENST00000457889 MARCKSL1P49006 195 aa9.31□□□□□ -0.92
CDC42EP3-204ENST00000457889 FNTAP49354 379 aa9.31□□□□□ -0.92
CDC42EP3-204ENST00000457889 NDUFV1P49821 464 aa9.31□□□□□ -0.92
CDC42EP3-204ENST00000457889 SLC5A3P53794 718 aa9.31□□□□□ -0.92
CDC42EP3-204ENST00000457889 TAS2R40P59535 323 aa9.31□□□□□ -0.92
CDC42EP3-204ENST00000457889 RNASE9P60153 205 aaKnown RBP9.31□□□□□ -0.92
CDC42EP3-204ENST00000457889 SMC1AQ14683 1233 aaKnown RBP9.31□□□□□ -0.92
CDC42EP3-204ENST00000457889 TAZQ16635 292 aa9.31□□□□□ -0.92
CDC42EP3-204ENST00000457889 CCDC142Q17RM4 750 aa9.31□□□□□ -0.92
CDC42EP3-204ENST00000457889 CCDC14Q49A88 953 aa9.31□□□□□ -0.92
CDC42EP3-204ENST00000457889 TFDP3Q5H9I0 405 aa9.31□□□□□ -0.92
CDC42EP3-204ENST00000457889 TEX35Q5T0J7 233 aa9.31□□□□□ -0.92
CDC42EP3-204ENST00000457889 ACBD5Q5T8D3 534 aaPredicted RBP9.31□□□□□ -0.92
CDC42EP3-204ENST00000457889 RTL10Q7L3V2 364 aa9.31□□□□□ -0.92
CDC42EP3-204ENST00000457889 BNIPLQ7Z465 357 aa9.31□□□□□ -0.92
CDC42EP3-204ENST00000457889 MAATS1Q7Z4T9 603 aa9.31□□□□□ -0.92
CDC42EP3-204ENST00000457889 MON1AQ86VX9 555 aa9.31□□□□□ -0.92
CDC42EP3-204ENST00000457889 C12orf50Q8NA57 414 aaPredicted RBP9.31□□□□□ -0.92
CDC42EP3-204ENST00000457889 PDZD8Q8NEN9 1154 aa9.31□□□□□ -0.92
CDC42EP3-204ENST00000457889 CMASQ8NFW8 434 aaPredicted RBP9.31□□□□□ -0.92
CDC42EP3-204ENST00000457889 ZNF461Q8TAF7 563 aa9.31□□□□□ -0.92
CDC42EP3-204ENST00000457889 FAM172AQ8WUF8 416 aa9.31□□□□□ -0.92
CDC42EP3-204ENST00000457889 OVCA2Q8WZ82 227 aa9.31□□□□□ -0.92
CDC42EP3-204ENST00000457889 PIWIL1Q96J94 861 aaKnown RBP9.31□□□□□ -0.92
CDC42EP3-204ENST00000457889 SAMD11Q96NU1 681 aa9.31□□□□□ -0.92
CDC42EP3-204ENST00000457889 TMEM209Q96SK2 561 aa9.31□□□□□ -0.92
CDC42EP3-204ENST00000457889 CDK5RAP1Q96SZ6 601 aaKnown RBP9.31□□□□□ -0.92
CDC42EP3-204ENST00000457889 KCNK16Q96T55 309 aa9.31□□□□□ -0.92
CDC42EP3-204ENST00000457889 NPY6RQ99463 290 aa9.31□□□□□ -0.92
CDC42EP3-204ENST00000457889 VN1R3Q9BXE9 311 aa9.31□□□□□ -0.92
CDC42EP3-204ENST00000457889 ABCC13Q9NSE7 274 aa9.31□□□□□ -0.92
CDC42EP3-204ENST00000457889 TMEM30AQ9NV96 361 aa9.31□□□□□ -0.92
CDC42EP3-204ENST00000457889 CLIC5Q9NZA1 410 aa9.31□□□□□ -0.92
CDC42EP3-204ENST00000457889 RCOR3Q9P2K3 495 aaPredicted RBP9.31□□□□□ -0.92
CDC42EP3-204ENST00000457889 FEZ2Q9UHY8 353 aaPredicted RBP9.31□□□□□ -0.92
CDC42EP3-204ENST00000457889 CDY1Q9Y6F8 540 aa9.31□□□□□ -0.92
CDC42EP3-204ENST00000457889 FGF18O76093 207 aa9.3□□□□□ -0.92
CDC42EP3-204ENST00000457889 ABLIM3O94929 683 aa9.3□□□□□ -0.92
CDC42EP3-204ENST00000457889 TRUB2O95900 331 aaKnown RBP9.3□□□□□ -0.92
CDC42EP3-204ENST00000457889 RB1P06400 928 aa9.3□□□□□ -0.92
CDC42EP3-204ENST00000457889 OR4Q2P0C623 313 aa9.3□□□□□ -0.92
CDC42EP3-204ENST00000457889 USP17L7P0C7H9 530 aa9.3□□□□□ -0.92
CDC42EP3-204ENST00000457889 LINC00271P0C7V0 271 aa9.3□□□□□ -0.92
CDC42EP3-204ENST00000457889 CTSAP10619 480 aa9.3□□□□□ -0.92
CDC42EP3-204ENST00000457889 ATF2P15336 505 aa9.3□□□□□ -0.92
CDC42EP3-204ENST00000457889 CHRNA3P32297 505 aa9.3□□□□□ -0.92
CDC42EP3-204ENST00000457889 GBP1P32455 592 aa9.3□□□□□ -0.92
CDC42EP3-204ENST00000457889 CACNA2D1P54289 1103 aa9.3□□□□□ -0.92
CDC42EP3-204ENST00000457889 HDAC4P56524 1084 aa9.3□□□□□ -0.92
CDC42EP3-204ENST00000457889 ROR1Q01973 937 aa9.3□□□□□ -0.92
CDC42EP3-204ENST00000457889 SCAPQ12770 1279 aa9.3□□□□□ -0.92
CDC42EP3-204ENST00000457889 PLD1Q13393 1074 aa9.3□□□□□ -0.92
CDC42EP3-204ENST00000457889 NNTQ13423 1086 aa9.3□□□□□ -0.92
CDC42EP3-204ENST00000457889 RAB33AQ14088 237 aa9.3□□□□□ -0.92
CDC42EP3-204ENST00000457889 DHX34Q14147 1143 aaKnown RBP9.3□□□□□ -0.92
CDC42EP3-204ENST00000457889 TAF5Q15542 800 aa9.3□□□□□ -0.92
CDC42EP3-204ENST00000457889 CYP1B1Q16678 543 aa9.3□□□□□ -0.92
CDC42EP3-204ENST00000457889 PTPROQ16827 1216 aa9.3□□□□□ -0.92
CDC42EP3-204ENST00000457889 DCAF6Q58WW2 860 aa9.3□□□□□ -0.92
CDC42EP3-204ENST00000457889 ZFYVE27Q5T4F4 411 aa9.3□□□□□ -0.92
CDC42EP3-204ENST00000457889 TRNP1Q6NT89 227 aa9.3□□□□□ -0.92
CDC42EP3-204ENST00000457889 C8orf74Q6P047 294 aa9.3□□□□□ -0.92
CDC42EP3-204ENST00000457889 FAM117BQ6P1L5 589 aa9.3□□□□□ -0.92
CDC42EP3-204ENST00000457889 DENND5BQ6ZUT9 1274 aa9.3□□□□□ -0.92
CDC42EP3-204ENST00000457889 SND1Q7KZF4 910 aaKnown RBP eCLIP9.3□□□□□ -0.92
CDC42EP3-204ENST00000457889 GPRIN1Q7Z2K8 1008 aa9.3□□□□□ -0.92
CDC42EP3-204ENST00000457889 TADA2BQ86TJ2 420 aa9.3□□□□□ -0.92
CDC42EP3-204ENST00000457889 CCDC50Q8IVM0 306 aa9.3□□□□□ -0.92
CDC42EP3-204ENST00000457889 SCN4BQ8IWT1 228 aa9.3□□□□□ -0.92
CDC42EP3-204ENST00000457889 DEFB106AQ8N104 65 aa9.3□□□□□ -0.92
CDC42EP3-204ENST00000457889 VPS52Q8N1B4 723 aa9.3□□□□□ -0.92
CDC42EP3-204ENST00000457889 ZNF276Q8N554 614 aa9.3□□□□□ -0.92
CDC42EP3-204ENST00000457889 ARFGAP1Q8N6T3 406 aa9.3□□□□□ -0.92
CDC42EP3-204ENST00000457889 EIF1ADQ8N9N8 165 aaKnown RBP9.3□□□□□ -0.92
CDC42EP3-204ENST00000457889 TTC13Q8NBP0 860 aa9.3□□□□□ -0.92
CDC42EP3-204ENST00000457889 CCDC26Q8TAB7 109 aa9.3□□□□□ -0.92
CDC42EP3-204ENST00000457889 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP9.3□□□□□ -0.92
CDC42EP3-204ENST00000457889 SLCO2A1Q92959 643 aa9.3□□□□□ -0.92
CDC42EP3-204ENST00000457889 NTAN1Q96AB6 310 aa9.3□□□□□ -0.92
CDC42EP3-204ENST00000457889 MS4A14Q96JA4 679 aa9.3□□□□□ -0.92
CDC42EP3-204ENST00000457889 CFAP57Q96MR6 1250 aa9.3□□□□□ -0.92
CDC42EP3-204ENST00000457889 SLITRK1Q96PX8 696 aa9.3□□□□□ -0.92
CDC42EP3-204ENST00000457889 ZNF670Q9BS34 389 aa9.3□□□□□ -0.92
CDC42EP3-204ENST00000457889 TTLL2Q9BWV7 592 aa9.3□□□□□ -0.92
CDC42EP3-204ENST00000457889 OSBPL8Q9BZF1 889 aa9.3□□□□□ -0.92
CDC42EP3-204ENST00000457889 RXFP1Q9HBX9 757 aa9.3□□□□□ -0.92
CDC42EP3-204ENST00000457889 NGRNQ9NPE2 291 aaKnown RBP9.3□□□□□ -0.92
CDC42EP3-204ENST00000457889 OLA1Q9NTK5 396 aaKnown RBP9.3□□□□□ -0.92
CDC42EP3-204ENST00000457889 RBM12Q9NTZ6 932 aaKnown RBP9.3□□□□□ -0.92
CDC42EP3-204ENST00000457889 ARGLU1Q9NWB6 273 aaPredicted RBP9.3□□□□□ -0.92
CDC42EP3-204ENST00000457889 CXXC1Q9P0U4 656 aaPredicted RBP9.3□□□□□ -0.92
CDC42EP3-204ENST00000457889 IRAK3Q9Y616 596 aa9.3□□□□□ -0.92
CDC42EP3-204ENST00000457889 WDR27A2RRH5 827 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms