RNA–Protein interactions for RNA: ENST00000455631.5

PTPRA-208, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5

Gene PTPRA, Length 1,107 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-208ENST00000455631 IGSF10Q6WRI0 2623 aa24.62■■□□□ 1.53
PTPRA-208ENST00000455631 A0A1B0GTW7 788 aa24.62■■□□□ 1.53
PTPRA-208ENST00000455631 A8MXQ7 604 aa24.62■■□□□ 1.53
PTPRA-208ENST00000455631 ZIC2O95409 532 aaPredicted RBP24.62■■□□□ 1.53
PTPRA-208ENST00000455631 CD6P30203 668 aa24.62■■□□□ 1.53
PTPRA-208ENST00000455631 TRAPPC11Q7Z392 1133 aa24.62■■□□□ 1.53
PTPRA-208ENST00000455631 ZCCHC9Q8N567 271 aaKnown RBP24.62■■□□□ 1.53
PTPRA-208ENST00000455631 KCNK16Q96T55 309 aa24.62■■□□□ 1.53
PTPRA-208ENST00000455631 BBS2Q9BXC9 721 aa24.62■■□□□ 1.53
PTPRA-208ENST00000455631 GMIPQ9P107 970 aa24.62■■□□□ 1.53
PTPRA-208ENST00000455631 GCN1Q92616 2671 aaKnown RBP24.61■■□□□ 1.53
PTPRA-208ENST00000455631 PRRT4C9JH25 899 aa24.61■■□□□ 1.53
PTPRA-208ENST00000455631 CACNG3O60359 315 aa24.61■■□□□ 1.53
PTPRA-208ENST00000455631 TYRP14679 529 aa24.61■■□□□ 1.53
PTPRA-208ENST00000455631 SLC5A3P53794 718 aa24.61■■□□□ 1.53
PTPRA-208ENST00000455631 WDR72Q3MJ13 1102 aa24.61■■□□□ 1.53
PTPRA-208ENST00000455631 TPGS1Q6ZTW0 290 aa24.61■■□□□ 1.53
PTPRA-208ENST00000455631 MIR1-1HGQ9H1L0 117 aa24.61■■□□□ 1.53
PTPRA-208ENST00000455631 IL21RQ9HBE5 538 aa24.61■■□□□ 1.53
PTPRA-208ENST00000455631 PANK4Q9NVE7 773 aa24.61■■□□□ 1.53
PTPRA-208ENST00000455631 ATP8B3O60423 1300 aa24.61■■□□□ 1.53
PTPRA-208ENST00000455631 DLATP10515 647 aaKnown RBP24.6■■□□□ 1.53
PTPRA-208ENST00000455631 TXLNAP40222 546 aa24.6■■□□□ 1.53
PTPRA-208ENST00000455631 SNX30Q5VWJ9 437 aa24.6■■□□□ 1.53
PTPRA-208ENST00000455631 COL26A1Q96A83 441 aa24.6■■□□□ 1.53
PTPRA-208ENST00000455631 MED10Q9BTT4 135 aa24.6■■□□□ 1.53
PTPRA-208ENST00000455631 GAREM1Q9H706 876 aa24.6■■□□□ 1.53
PTPRA-208ENST00000455631 HSPBP1Q9NZL4 362 aa24.6■■□□□ 1.53
PTPRA-208ENST00000455631 KIAA1522Q9P206 1035 aaPredicted RBP24.6■■□□□ 1.53
PTPRA-208ENST00000455631 FRMD3A2A2Y4 597 aa24.59■■□□□ 1.53
PTPRA-208ENST00000455631 CER1O95813 267 aa24.59■■□□□ 1.53
PTPRA-208ENST00000455631 CST3P01034 146 aaPredicted RBP24.59■■□□□ 1.53
PTPRA-208ENST00000455631 NCAM1P13591 858 aa24.59■■□□□ 1.53
PTPRA-208ENST00000455631 TNNI1P19237 187 aa24.59■■□□□ 1.53
PTPRA-208ENST00000455631 TMPRSS7Q7RTY8 843 aa24.59■■□□□ 1.53
PTPRA-208ENST00000455631 BRAPQ7Z569 592 aa24.59■■□□□ 1.53
PTPRA-208ENST00000455631 FAM35AQ86V20 835 aa24.59■■□□□ 1.53
PTPRA-208ENST00000455631 TOE1Q96GM8 510 aaKnown RBP24.59■■□□□ 1.53
PTPRA-208ENST00000455631 GPR174Q9BXC1 333 aa24.59■■□□□ 1.53
PTPRA-208ENST00000455631 TRIM9Q9C026 710 aa24.59■■□□□ 1.53
PTPRA-208ENST00000455631 TM7SF3Q9NS93 570 aa24.59■■□□□ 1.53
PTPRA-208ENST00000455631 NXF1Q9UBU9 619 aaKnown RBP24.59■■□□□ 1.53
PTPRA-208ENST00000455631 WASH3PC4AMC7 463 aa24.58■■□□□ 1.53
PTPRA-208ENST00000455631 FAM163BP0C2L3 166 aa24.58■■□□□ 1.53
PTPRA-208ENST00000455631 DGKGP49619 791 aa24.58■■□□□ 1.53
PTPRA-208ENST00000455631 DNASE2BQ8WZ79 361 aa24.58■■□□□ 1.53
PTPRA-208ENST00000455631 TMX3Q96JJ7 454 aa24.58■■□□□ 1.53
PTPRA-208ENST00000455631 DMAP1Q9NPF5 467 aaPredicted RBP24.58■■□□□ 1.53
PTPRA-208ENST00000455631 WDR35Q9P2L0 1181 aa24.58■■□□□ 1.53
PTPRA-208ENST00000455631 FNDC3AQ9Y2H6 1198 aaKnown RBP24.58■■□□□ 1.53
PTPRA-208ENST00000455631 GOLGA8CPA6NN73 597 aa24.57■■□□□ 1.52
PTPRA-208ENST00000455631 GFRA2O00451 464 aa24.57■■□□□ 1.52
PTPRA-208ENST00000455631 TLR5O60602 858 aa24.57■■□□□ 1.52
PTPRA-208ENST00000455631 CILPO75339 1184 aa24.57■■□□□ 1.52
PTPRA-208ENST00000455631 ZDHHC11BP0C7U3 371 aa24.57■■□□□ 1.52
PTPRA-208ENST00000455631 MATKP42679 507 aa24.57■■□□□ 1.52
PTPRA-208ENST00000455631 STARD3Q14849 445 aa24.57■■□□□ 1.52
PTPRA-208ENST00000455631 LARP1BQ659C4 914 aaKnown RBP24.57■■□□□ 1.52
PTPRA-208ENST00000455631 STXBP4Q6ZWJ1 553 aa24.57■■□□□ 1.52
PTPRA-208ENST00000455631 MARCH9Q86YJ5 346 aa24.57■■□□□ 1.52
PTPRA-208ENST00000455631 RDH13Q8NBN7 331 aa24.57■■□□□ 1.52
PTPRA-208ENST00000455631 BHMTQ93088 406 aa24.57■■□□□ 1.52
PTPRA-208ENST00000455631 PRDM16Q9HAZ2 1276 aa24.57■■□□□ 1.52
PTPRA-208ENST00000455631 TOR4AQ9NXH8 423 aa24.57■■□□□ 1.52
PTPRA-208ENST00000455631 WSB2Q9NYS7 404 aaPredicted RBP24.57■■□□□ 1.52
PTPRA-208ENST00000455631 MARK1Q9P0L2 795 aa24.57■■□□□ 1.52
PTPRA-208ENST00000455631 DKK4Q9UBT3 224 aa24.57■■□□□ 1.52
PTPRA-208ENST00000455631 LSM7Q9UK45 103 aaKnown RBP24.57■■□□□ 1.52
PTPRA-208ENST00000455631 NFE2L3Q9Y4A8 694 aa24.57■■□□□ 1.52
PTPRA-208ENST00000455631 CLSTN1O94985 981 aa24.56■■□□□ 1.52
PTPRA-208ENST00000455631 ATXN1LP0C7T5 689 aaKnown RBP24.56■■□□□ 1.52
PTPRA-208ENST00000455631 ZNF883P0CG24 379 aa24.56■■□□□ 1.52
PTPRA-208ENST00000455631 SNRNP35Q16560 246 aaKnown RBP24.56■■□□□ 1.52
PTPRA-208ENST00000455631 FUT11Q495W5 492 aa24.56■■□□□ 1.52
PTPRA-208ENST00000455631 DCAF12L1Q5VU92 463 aa24.56■■□□□ 1.52
PTPRA-208ENST00000455631 HTR3DQ70Z44 454 aa24.56■■□□□ 1.52
PTPRA-208ENST00000455631 GLIS3Q8NEA6 775 aa24.56■■□□□ 1.52
PTPRA-208ENST00000455631 BAHD1Q8TBE0 780 aaPredicted RBP24.56■■□□□ 1.52
PTPRA-208ENST00000455631 CCDC127Q96BQ5 260 aa24.56■■□□□ 1.52
PTPRA-208ENST00000455631 SMARCD1Q96GM5 515 aa24.56■■□□□ 1.52
PTPRA-208ENST00000455631 CGRRF1Q99675 332 aa24.56■■□□□ 1.52
PTPRA-208ENST00000455631 KIAA1586Q9HCI6 787 aa24.56■■□□□ 1.52
PTPRA-208ENST00000455631 KRT82Q9NSB4 513 aa24.56■■□□□ 1.52
PTPRA-208ENST00000455631 IL37Q9NZH6 218 aa24.56■■□□□ 1.52
PTPRA-208ENST00000455631 USP36Q9P275 1121 aaKnown RBP24.56■■□□□ 1.52
PTPRA-208ENST00000455631 FBXO2Q9UK22 296 aaPredicted RBP24.56■■□□□ 1.52
PTPRA-208ENST00000455631 SMC3Q9UQE7 1217 aa24.56■■□□□ 1.52
PTPRA-208ENST00000455631 CLIC4Q9Y696 253 aa24.56■■□□□ 1.52
PTPRA-208ENST00000455631 STON1Q9Y6Q2 735 aa24.56■■□□□ 1.52
PTPRA-208ENST00000455631 BCAT2O15382 392 aaPredicted RBP24.55■■□□□ 1.52
PTPRA-208ENST00000455631 GREM1O60565 184 aa24.55■■□□□ 1.52
PTPRA-208ENST00000455631 STAT6P42226 847 aa24.55■■□□□ 1.52
PTPRA-208ENST00000455631 PGFP49763 221 aa24.55■■□□□ 1.52
PTPRA-208ENST00000455631 CYP4F3Q08477 520 aa24.55■■□□□ 1.52
PTPRA-208ENST00000455631 GOLGA8FQ08AF8 430 aa24.55■■□□□ 1.52
PTPRA-208ENST00000455631 GOLGA8DPQ0D2H9 430 aa24.55■■□□□ 1.52
PTPRA-208ENST00000455631 TRPC3Q13507 836 aa24.55■■□□□ 1.52
PTPRA-208ENST00000455631 IL27RAQ6UWB1 636 aa24.55■■□□□ 1.52
PTPRA-208ENST00000455631 CCDC73Q6ZRK6 1079 aa24.55■■□□□ 1.52
PTPRA-208ENST00000455631 CCDC65Q8IXS2 484 aa24.55■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms