RNA–Protein interactions for RNA: ENST00000454583.6

RIF1-207, Transcript of replication timing regulatory factor 1, humanhuman

TSL 2

Gene RIF1, Length 3,552 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-207ENST00000454583 ACAP1Q15027 740 aa5.21□□□□□ -1.57
RIF1-207ENST00000454583 OASLQ15646 514 aaKnown RBP5.21□□□□□ -1.57
RIF1-207ENST00000454583 LONRF2Q1L5Z9 754 aa5.21□□□□□ -1.57
RIF1-207ENST00000454583 ARHGAP29Q52LW3 1261 aa5.21□□□□□ -1.57
RIF1-207ENST00000454583 SYPL2Q5VXT5 272 aa5.21□□□□□ -1.57
RIF1-207ENST00000454583 TPGS2Q68CL5 300 aa5.21□□□□□ -1.57
RIF1-207ENST00000454583 TWF2Q6IBS0 349 aaKnown RBP5.21□□□□□ -1.57
RIF1-207ENST00000454583 GAREM2Q75VX8 874 aa5.21□□□□□ -1.57
RIF1-207ENST00000454583 KLHL23Q8NBE8 558 aa5.21□□□□□ -1.57
RIF1-207ENST00000454583 TSEN2Q8NCE0 465 aaKnown RBP5.21□□□□□ -1.57
RIF1-207ENST00000454583 SLC2A14Q8TDB8 520 aa5.21□□□□□ -1.57
RIF1-207ENST00000454583 TEKT4Q8WW24 435 aa5.21□□□□□ -1.57
RIF1-207ENST00000454583 KRT35Q92764 455 aa5.21□□□□□ -1.57
RIF1-207ENST00000454583 SAMD11Q96NU1 681 aa5.21□□□□□ -1.57
RIF1-207ENST00000454583 TMUB1Q9BVT8 246 aa5.21□□□□□ -1.57
RIF1-207ENST00000454583 NT5C1AQ9BXI3 368 aa5.21□□□□□ -1.57
RIF1-207ENST00000454583 TWSG1Q9GZX9 223 aa5.21□□□□□ -1.57
RIF1-207ENST00000454583 LMAN2LQ9H0V9 348 aa5.21□□□□□ -1.57
RIF1-207ENST00000454583 ATP13A1Q9HD20 1204 aa5.21□□□□□ -1.57
RIF1-207ENST00000454583 AAASQ9NRG9 546 aa5.21□□□□□ -1.57
RIF1-207ENST00000454583 DDX43Q9NXZ2 648 aaKnown RBP5.21□□□□□ -1.57
RIF1-207ENST00000454583 ADAMTS1Q9UHI8 967 aa5.21□□□□□ -1.57
RIF1-207ENST00000454583 INSL6Q9Y581 213 aa5.21□□□□□ -1.57
RIF1-207ENST00000454583 E5RJQ4 531 aa5.21□□□□□ -1.58
RIF1-207ENST00000454583 ENC1O14682 589 aa5.21□□□□□ -1.58
RIF1-207ENST00000454583 NCK2O43639 380 aa5.21□□□□□ -1.58
RIF1-207ENST00000454583 PALMO75781 387 aa5.21□□□□□ -1.58
RIF1-207ENST00000454583 FAM155BO75949 473 aa5.21□□□□□ -1.58
RIF1-207ENST00000454583 PROSCO94903 275 aa5.21□□□□□ -1.58
RIF1-207ENST00000454583 GJB6O95452 261 aa5.21□□□□□ -1.58
RIF1-207ENST00000454583 FGBP02675 491 aa5.21□□□□□ -1.58
RIF1-207ENST00000454583 CDK11BP21127 795 aaKnown RBP5.21□□□□□ -1.58
RIF1-207ENST00000454583 L1CAMP32004 1257 aa5.21□□□□□ -1.58
RIF1-207ENST00000454583 RFC1P35251 1148 aaPredicted RBP5.21□□□□□ -1.58
RIF1-207ENST00000454583 CYLC1P35663 651 aaPredicted RBP5.21□□□□□ -1.58
RIF1-207ENST00000454583 HSPA9P38646 679 aaKnown RBP5.21□□□□□ -1.58
RIF1-207ENST00000454583 CDKN2BP42772 138 aa5.21□□□□□ -1.58
RIF1-207ENST00000454583 SLC6A3Q01959 620 aa5.21□□□□□ -1.58
RIF1-207ENST00000454583 GABPB1Q06547 395 aaPredicted RBP5.21□□□□□ -1.58
RIF1-207ENST00000454583 HYAL1Q12794 435 aa5.21□□□□□ -1.58
RIF1-207ENST00000454583 STILQ15468 1287 aa5.21□□□□□ -1.58
RIF1-207ENST00000454583 TRADDQ15628 312 aa5.21□□□□□ -1.58
RIF1-207ENST00000454583 ASIC2Q16515 512 aa5.21□□□□□ -1.58
RIF1-207ENST00000454583 TMEM132AQ24JP5 1023 aa5.21□□□□□ -1.58
RIF1-207ENST00000454583 SYCE2Q6PIF2 218 aa5.21□□□□□ -1.58
RIF1-207ENST00000454583 TMEM270Q6UE05 265 aa5.21□□□□□ -1.58
RIF1-207ENST00000454583 XKR5Q6UX68 686 aa5.21□□□□□ -1.58
RIF1-207ENST00000454583 C7orf61Q8IZ16 206 aa5.21□□□□□ -1.58
RIF1-207ENST00000454583 PLD5Q8N7P1 536 aa5.21□□□□□ -1.58
RIF1-207ENST00000454583 ZNF461Q8TAF7 563 aa5.21□□□□□ -1.58
RIF1-207ENST00000454583 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP5.21□□□□□ -1.58
RIF1-207ENST00000454583 MYO19Q96H55 970 aa5.21□□□□□ -1.58
RIF1-207ENST00000454583 PRICKLE1Q96MT3 831 aaPredicted RBP5.21□□□□□ -1.58
RIF1-207ENST00000454583 ADPGKQ9BRR6 497 aa5.21□□□□□ -1.58
RIF1-207ENST00000454583 MTPAPQ9NVV4 582 aaKnown RBP eCLIP5.21□□□□□ -1.58
RIF1-207ENST00000454583 SLTMQ9NWH9 1034 aaKnown RBP eCLIP5.21□□□□□ -1.58
RIF1-207ENST00000454583 UVRAGQ9P2Y5 699 aa5.21□□□□□ -1.58
RIF1-207ENST00000454583 NXF1Q9UBU9 619 aaKnown RBP5.21□□□□□ -1.58
RIF1-207ENST00000454583 PCYOX1Q9UHG3 505 aa5.21□□□□□ -1.58
RIF1-207ENST00000454583 EFR3BQ9Y2G0 817 aa5.21□□□□□ -1.58
RIF1-207ENST00000454583 MTCH2Q9Y6C9 303 aa5.21□□□□□ -1.58
RIF1-207ENST00000454583 SPEGQ15772 3267 aa5.21□□□□□ -1.58
RIF1-207ENST00000454583 COL5A1P20908 1838 aaPredicted RBP5.21□□□□□ -1.58
RIF1-207ENST00000454583 TCRBV7S2A1N4TA0A589 114 aa5.21□□□□□ -1.58
RIF1-207ENST00000454583 YJEFN3A6XGL0 299 aa5.21□□□□□ -1.58
RIF1-207ENST00000454583 E7ENQ6 273 aa5.21□□□□□ -1.58
RIF1-207ENST00000454583 TNNC2P02585 160 aa5.21□□□□□ -1.58
RIF1-207ENST00000454583 TPM1P09493 284 aa5.21□□□□□ -1.58
RIF1-207ENST00000454583 ODC1P11926 461 aa5.21□□□□□ -1.58
RIF1-207ENST00000454583 KRT13P13646 458 aa5.21□□□□□ -1.58
RIF1-207ENST00000454583 GNL1P36915 607 aaPredicted RBP5.21□□□□□ -1.58
RIF1-207ENST00000454583 HCAR3P49019 387 aa5.21□□□□□ -1.58
RIF1-207ENST00000454583 TFAMQ00059 246 aaKnown RBP5.21□□□□□ -1.58
RIF1-207ENST00000454583 SLC10A2Q12908 348 aaPredicted RBP5.21□□□□□ -1.58
RIF1-207ENST00000454583 ADAM15Q13444 863 aa5.21□□□□□ -1.58
RIF1-207ENST00000454583 ZNF667Q5HYK9 610 aa5.21□□□□□ -1.58
RIF1-207ENST00000454583 DUPD1Q68J44 220 aa5.21□□□□□ -1.58
RIF1-207ENST00000454583 TTC27Q6P3X3 843 aa5.21□□□□□ -1.58
RIF1-207ENST00000454583 ALKBH5Q6P6C2 394 aaKnown RBP5.21□□□□□ -1.58
RIF1-207ENST00000454583 PRSS55Q6UWB4 352 aaPredicted RBP5.21□□□□□ -1.58
RIF1-207ENST00000454583 VSTM1Q6UX27 236 aa5.21□□□□□ -1.58
RIF1-207ENST00000454583 ACOT1Q86TX2 421 aa5.21□□□□□ -1.58
RIF1-207ENST00000454583 PSTKQ8IV42 348 aaKnown RBP5.21□□□□□ -1.58
RIF1-207ENST00000454583 ARHGAP12Q8IWW6 846 aa5.21□□□□□ -1.58
RIF1-207ENST00000454583 CPLX3Q8WVH0 158 aa5.21□□□□□ -1.58
RIF1-207ENST00000454583 SYT15Q9BQS2 421 aa5.21□□□□□ -1.58
RIF1-207ENST00000454583 CLIC5Q9NZA1 410 aa5.21□□□□□ -1.58
RIF1-207ENST00000454583 AFF4Q9UHB7 1163 aaKnown RBP5.21□□□□□ -1.58
RIF1-207ENST00000454583 PCDHB7Q9Y5E2 793 aa5.21□□□□□ -1.58
RIF1-207ENST00000454583 PCDHGA4Q9Y5G9 962 aa5.21□□□□□ -1.58
RIF1-207ENST00000454583 TMEM131Q92545 1883 aa5.21□□□□□ -1.58
RIF1-207ENST00000454583 TRUB2O95900 331 aaKnown RBP5.2□□□□□ -1.58
RIF1-207ENST00000454583 TNNI1P19237 187 aa5.2□□□□□ -1.58
RIF1-207ENST00000454583 SLC7A9P82251 487 aa5.2□□□□□ -1.58
RIF1-207ENST00000454583 FZD5Q13467 585 aa5.2□□□□□ -1.58
RIF1-207ENST00000454583 GOLGA7BQ2TAP0 167 aa5.2□□□□□ -1.58
RIF1-207ENST00000454583 CCDC122Q5T0U0 273 aa5.2□□□□□ -1.58
RIF1-207ENST00000454583 FKBP15Q5T1M5 1219 aa5.2□□□□□ -1.58
RIF1-207ENST00000454583 UBAP2Q5T6F2 1119 aaKnown RBP5.2□□□□□ -1.58
RIF1-207ENST00000454583 DAB2IPQ5VWQ8 1189 aa5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms