RNA–Protein interactions for RNA: ENST00000449264.2

TNF-208, Transcript of tumor necrosis factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNF, Length 1,676 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNF-208ENST00000449264 NSUN3Q9H649 340 aaKnown RBP15.31■□□□□ 0.04
TNF-208ENST00000449264 COMMD8Q9NX08 183 aa15.31■□□□□ 0.04
TNF-208ENST00000449264 DNAI1Q9UI46 699 aa15.31■□□□□ 0.04
TNF-208ENST00000449264 PACSIN2Q9UNF0 486 aaPredicted RBP15.31■□□□□ 0.04
TNF-208ENST00000449264 REV3LO60673 3130 aa15.3■□□□□ 0.04
TNF-208ENST00000449264 FAM92AA1XBS5 289 aa15.3■□□□□ 0.04
TNF-208ENST00000449264 ZMYND10O75800 440 aa15.3■□□□□ 0.04
TNF-208ENST00000449264 FYNP06241 537 aa15.3■□□□□ 0.04
TNF-208ENST00000449264 COMTP21964 271 aa15.3■□□□□ 0.04
TNF-208ENST00000449264 MATKP42679 507 aa15.3■□□□□ 0.04
TNF-208ENST00000449264 SSR1P43307 286 aaKnown RBP15.3■□□□□ 0.04
TNF-208ENST00000449264 SULT1E1P49888 294 aa15.3■□□□□ 0.04
TNF-208ENST00000449264 ETF1P62495 437 aaKnown RBP15.3■□□□□ 0.04
TNF-208ENST00000449264 CCDC14Q49A88 953 aa15.3■□□□□ 0.04
TNF-208ENST00000449264 SYPL2Q5VXT5 272 aa15.3■□□□□ 0.04
TNF-208ENST00000449264 ELMSAN1Q6PJG2 1045 aa15.3■□□□□ 0.04
TNF-208ENST00000449264 PEX26Q7Z412 305 aa15.3■□□□□ 0.04
TNF-208ENST00000449264 MON1AQ86VX9 555 aa15.3■□□□□ 0.04
TNF-208ENST00000449264 ARHGAP18Q8N392 663 aa15.3■□□□□ 0.04
TNF-208ENST00000449264 ADAM32Q8TC27 787 aa15.3■□□□□ 0.04
TNF-208ENST00000449264 ZNF592Q92610 1267 aa15.3■□□□□ 0.04
TNF-208ENST00000449264 FAM161BQ96MY7 647 aa15.3■□□□□ 0.04
TNF-208ENST00000449264 CNPY3Q9BT09 278 aa15.3■□□□□ 0.04
TNF-208ENST00000449264 TRIM62Q9BVG3 475 aa15.3■□□□□ 0.04
TNF-208ENST00000449264 ZNF334Q9HCZ1 680 aaPredicted RBP15.3■□□□□ 0.04
TNF-208ENST00000449264 TLR8Q9NR97 1041 aaKnown RBP15.3■□□□□ 0.04
TNF-208ENST00000449264 OSER1Q9NX31 292 aa15.3■□□□□ 0.04
TNF-208ENST00000449264 DPP7Q9UHL4 492 aa15.3■□□□□ 0.04
TNF-208ENST00000449264 STAP1Q9ULZ2 295 aa15.3■□□□□ 0.04
TNF-208ENST00000449264 ALG6Q9Y672 507 aa15.3■□□□□ 0.04
TNF-208ENST00000449264 ANAPC1Q9H1A4 1944 aa15.3■□□□□ 0.04
TNF-208ENST00000449264 TMEM265A0A087WTH1 108 aa15.29■□□□□ 0.04
TNF-208ENST00000449264 SYNJ2BP-COX16A0A087WUM0 186 aa15.29■□□□□ 0.04
TNF-208ENST00000449264 ENC1O14682 589 aa15.29■□□□□ 0.04
TNF-208ENST00000449264 NCK2O43639 380 aa15.29■□□□□ 0.04
TNF-208ENST00000449264 DESP17661 470 aa15.29■□□□□ 0.04
TNF-208ENST00000449264 TFE3P19532 575 aaPredicted RBP15.29■□□□□ 0.04
TNF-208ENST00000449264 GJC1P36383 396 aa15.29■□□□□ 0.04
TNF-208ENST00000449264 PITX1P78337 314 aaPredicted RBP15.29■□□□□ 0.04
TNF-208ENST00000449264 PIGHQ14442 188 aaPredicted RBP15.29■□□□□ 0.04
TNF-208ENST00000449264 GRIN2CQ14957 1233 aa15.29■□□□□ 0.04
TNF-208ENST00000449264 TCEAL5Q5H9L2 206 aa15.29■□□□□ 0.04
TNF-208ENST00000449264 SH3PXD2AQ5TCZ1 1133 aa15.29■□□□□ 0.04
TNF-208ENST00000449264 RSRC2Q7L4I2 434 aaKnown RBP15.29■□□□□ 0.04
TNF-208ENST00000449264 ARCQ7LC44 396 aa15.29■□□□□ 0.04
TNF-208ENST00000449264 FAM172AQ8WUF8 416 aa15.29■□□□□ 0.04
TNF-208ENST00000449264 TRMT2BQ96GJ1 504 aaKnown RBP15.29■□□□□ 0.04
TNF-208ENST00000449264 LRCH3Q96II8 777 aa15.29■□□□□ 0.04
TNF-208ENST00000449264 TBCBQ99426 244 aa15.29■□□□□ 0.04
TNF-208ENST00000449264 ABCC13Q9NSE7 274 aa15.29■□□□□ 0.04
TNF-208ENST00000449264 COX16Q9P0S2 106 aa15.29■□□□□ 0.04
TNF-208ENST00000449264 UXTQ9UBK9 157 aaPredicted RBP15.29■□□□□ 0.04
TNF-208ENST00000449264 LCMT1Q9UIC8 334 aa15.29■□□□□ 0.04
TNF-208ENST00000449264 NUDT5Q9UKK9 219 aa15.29■□□□□ 0.04
TNF-208ENST00000449264 ASB3Q9Y575 518 aa15.29■□□□□ 0.04
TNF-208ENST00000449264 DPYSL4O14531 572 aa15.28■□□□□ 0.04
TNF-208ENST00000449264 FANCGO15287 622 aa15.28■□□□□ 0.04
TNF-208ENST00000449264 C1RP00736 705 aa15.28■□□□□ 0.04
TNF-208ENST00000449264 MAN1A1P33908 653 aa15.28■□□□□ 0.04
TNF-208ENST00000449264 NOS2P35228 1153 aa15.28■□□□□ 0.04
TNF-208ENST00000449264 SLFN11Q7Z7L1 901 aa15.28■□□□□ 0.04
TNF-208ENST00000449264 PDZD8Q8NEN9 1154 aa15.28■□□□□ 0.04
TNF-208ENST00000449264 VN1R2Q8NFZ6 395 aa15.28■□□□□ 0.04
TNF-208ENST00000449264 RNF139Q8WU17 664 aa15.28■□□□□ 0.04
TNF-208ENST00000449264 MYRFLQ96LU7 910 aa15.28■□□□□ 0.04
TNF-208ENST00000449264 CDCA3Q99618 268 aaPredicted RBP15.28■□□□□ 0.04
TNF-208ENST00000449264 CORO1BQ9BR76 489 aa15.28■□□□□ 0.04
TNF-208ENST00000449264 DDX23Q9BUQ8 820 aaKnown RBP15.28■□□□□ 0.04
TNF-208ENST00000449264 FAM204AQ9H8W3 233 aa15.28■□□□□ 0.04
TNF-208ENST00000449264 ASAH2Q9NR71 780 aa15.28■□□□□ 0.04
TNF-208ENST00000449264 AMFRQ9UKV5 643 aa15.28■□□□□ 0.04
TNF-208ENST00000449264 DENND4CQ5VZ89 1909 aa15.28■□□□□ 0.04
TNF-208ENST00000449264 KIF2AO00139 706 aaPredicted RBP15.28■□□□□ 0.04
TNF-208ENST00000449264 LRCH4O75427 683 aa15.28■□□□□ 0.04
TNF-208ENST00000449264 TADA3O75528 432 aa15.28■□□□□ 0.04
TNF-208ENST00000449264 RNF8O76064 485 aa15.28■□□□□ 0.04
TNF-208ENST00000449264 RARGP13631 454 aa15.28■□□□□ 0.04
TNF-208ENST00000449264 CASQ1P31415 396 aa15.28■□□□□ 0.04
TNF-208ENST00000449264 PTPN9P43378 593 aa15.28■□□□□ 0.04
TNF-208ENST00000449264 PSEN1P49768 467 aa15.28■□□□□ 0.04
TNF-208ENST00000449264 HYAL1Q12794 435 aa15.28■□□□□ 0.04
TNF-208ENST00000449264 NME3Q13232 169 aa15.28■□□□□ 0.04
TNF-208ENST00000449264 SLC25A52Q3SY17 297 aa15.28■□□□□ 0.04
TNF-208ENST00000449264 RAB6CQ53S08 254 aa15.28■□□□□ 0.04
TNF-208ENST00000449264 DNTTIP2Q5QJE6 756 aaKnown RBP15.28■□□□□ 0.04
TNF-208ENST00000449264 CC2D1AQ6P1N0 951 aaPredicted RBP15.28■□□□□ 0.04
TNF-208ENST00000449264 TAC4Q86UU9 113 aa15.28■□□□□ 0.04
TNF-208ENST00000449264 NT5DC3Q86UY8 548 aa15.28■□□□□ 0.04
TNF-208ENST00000449264 HS6ST3Q8IZP7 471 aa15.28■□□□□ 0.04
TNF-208ENST00000449264 NIPA2Q8N8Q9 360 aa15.28■□□□□ 0.04
TNF-208ENST00000449264 DQX1Q8TE96 717 aaKnown RBP15.28■□□□□ 0.04
TNF-208ENST00000449264 HDAC7Q8WUI4 952 aa15.28■□□□□ 0.04
TNF-208ENST00000449264 NAPGQ99747 312 aaPredicted RBP15.28■□□□□ 0.04
TNF-208ENST00000449264 ADAM33Q9BZ11 813 aa15.28■□□□□ 0.04
TNF-208ENST00000449264 RAB6CQ9H0N0 254 aa15.28■□□□□ 0.04
TNF-208ENST00000449264 HCFC1R1Q9NWW0 138 aa15.28■□□□□ 0.04
TNF-208ENST00000449264 TRPM5Q9NZQ8 1165 aa15.28■□□□□ 0.04
TNF-208ENST00000449264 JRKLQ9Y4A0 524 aa15.28■□□□□ 0.04
TNF-208ENST00000449264 C2orf16Q68DN1 1984 aa15.27■□□□□ 0.04
TNF-208ENST00000449264 M0QYT0 321 aa15.27■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms