RNA–Protein interactions for RNA: ENST00000449049.7

SHMT2-203, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 2,121 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-203ENST00000449049 DZANK1Q9NVP4 752 aa14.71□□□□□ -0.05
SHMT2-203ENST00000449049 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP14.71□□□□□ -0.05
SHMT2-203ENST00000449049 IP6K2Q9UHH9 426 aa14.71□□□□□ -0.05
SHMT2-203ENST00000449049 MTCH2Q9Y6C9 303 aa14.71□□□□□ -0.05
SHMT2-203ENST00000449049 LAMA3Q16787 3333 aa14.71□□□□□ -0.06
SHMT2-203ENST00000449049 CCL16O15467 120 aa14.71□□□□□ -0.06
SHMT2-203ENST00000449049 KIF5CO60282 957 aa14.71□□□□□ -0.06
SHMT2-203ENST00000449049 GLP2RO95838 553 aa14.71□□□□□ -0.06
SHMT2-203ENST00000449049 NOS2P35228 1153 aa14.71□□□□□ -0.06
SHMT2-203ENST00000449049 ZNF143P52747 638 aaPredicted RBP14.71□□□□□ -0.06
SHMT2-203ENST00000449049 ADGRE1Q14246 886 aa14.71□□□□□ -0.06
SHMT2-203ENST00000449049 NYAP1Q6ZVC0 841 aa14.71□□□□□ -0.06
SHMT2-203ENST00000449049 SLFN11Q7Z7L1 901 aa14.71□□□□□ -0.06
SHMT2-203ENST00000449049 NIPA2Q8N8Q9 360 aa14.71□□□□□ -0.06
SHMT2-203ENST00000449049 PRKD2Q9BZL6 878 aa14.71□□□□□ -0.06
SHMT2-203ENST00000449049 OSER1Q9NX31 292 aa14.71□□□□□ -0.06
SHMT2-203ENST00000449049 CLIC5Q9NZA1 410 aa14.71□□□□□ -0.06
SHMT2-203ENST00000449049 TADA3O75528 432 aa14.7□□□□□ -0.06
SHMT2-203ENST00000449049 PALMO75781 387 aa14.7□□□□□ -0.06
SHMT2-203ENST00000449049 PDGFRAP16234 1089 aa14.7□□□□□ -0.06
SHMT2-203ENST00000449049 MAN1A1P33908 653 aa14.7□□□□□ -0.06
SHMT2-203ENST00000449049 PTPN9P43378 593 aa14.7□□□□□ -0.06
SHMT2-203ENST00000449049 PPP3CCP48454 512 aa14.7□□□□□ -0.06
SHMT2-203ENST00000449049 PIGHQ14442 188 aaPredicted RBP14.7□□□□□ -0.06
SHMT2-203ENST00000449049 SYPL2Q5VXT5 272 aa14.7□□□□□ -0.06
SHMT2-203ENST00000449049 BTBD8Q5XKL5 378 aa14.7□□□□□ -0.06
SHMT2-203ENST00000449049 CMASQ8NFW8 434 aaPredicted RBP14.7□□□□□ -0.06
SHMT2-203ENST00000449049 TRIM58Q8NG06 486 aa14.7□□□□□ -0.06
SHMT2-203ENST00000449049 NT5C3BQ969T7 300 aa14.7□□□□□ -0.06
SHMT2-203ENST00000449049 ALS2CR12Q96Q35 445 aa14.7□□□□□ -0.06
SHMT2-203ENST00000449049 SFXN1Q9H9B4 322 aa14.7□□□□□ -0.06
SHMT2-203ENST00000449049 IL21Q9HBE4 155 aa14.7□□□□□ -0.06
SHMT2-203ENST00000449049 NAALADL1Q9UQQ1 740 aa14.7□□□□□ -0.06
SHMT2-203ENST00000449049 OBSL1O75147 1896 aa14.7□□□□□ -0.06
SHMT2-203ENST00000449049 PROSCO94903 275 aa14.69□□□□□ -0.06
SHMT2-203ENST00000449049 NCAM1P13591 858 aa14.69□□□□□ -0.06
SHMT2-203ENST00000449049 PSMA2P25787 234 aa14.69□□□□□ -0.06
SHMT2-203ENST00000449049 SDC4P31431 198 aa14.69□□□□□ -0.06
SHMT2-203ENST00000449049 EPHA5P54756 1037 aa14.69□□□□□ -0.06
SHMT2-203ENST00000449049 MESDQ14696 234 aa14.69□□□□□ -0.06
SHMT2-203ENST00000449049 CCDC14Q49A88 953 aa14.69□□□□□ -0.06
SHMT2-203ENST00000449049 DCAF6Q58WW2 860 aa14.69□□□□□ -0.06
SHMT2-203ENST00000449049 GPR153Q6NV75 609 aa14.69□□□□□ -0.06
SHMT2-203ENST00000449049 TMEM150AQ86TG1 271 aa14.69□□□□□ -0.06
SHMT2-203ENST00000449049 ZNF276Q8N554 614 aa14.69□□□□□ -0.06
SHMT2-203ENST00000449049 ZNF707Q96C28 371 aaPredicted RBP14.69□□□□□ -0.06
SHMT2-203ENST00000449049 CFAP57Q96MR6 1250 aa14.69□□□□□ -0.06
SHMT2-203ENST00000449049 NPY6RQ99463 290 aa14.69□□□□□ -0.06
SHMT2-203ENST00000449049 CNPY3Q9BT09 278 aa14.69□□□□□ -0.06
SHMT2-203ENST00000449049 IGFLR1Q9H665 355 aa14.69□□□□□ -0.06
SHMT2-203ENST00000449049 STAP1Q9ULZ2 295 aa14.69□□□□□ -0.06
SHMT2-203ENST00000449049 ZNF840PA6NDX5 716 aa14.69□□□□□ -0.06
SHMT2-203ENST00000449049 CAPN9O14815 690 aa14.69□□□□□ -0.06
SHMT2-203ENST00000449049 XYLBO75191 536 aa14.69□□□□□ -0.06
SHMT2-203ENST00000449049 F11P03951 625 aa14.69□□□□□ -0.06
SHMT2-203ENST00000449049 ACAP1Q15027 740 aa14.69□□□□□ -0.06
SHMT2-203ENST00000449049 SLC25A52Q3SY17 297 aa14.69□□□□□ -0.06
SHMT2-203ENST00000449049 OTUD1Q5VV17 481 aaPredicted RBP14.69□□□□□ -0.06
SHMT2-203ENST00000449049 BNIPLQ7Z465 357 aa14.69□□□□□ -0.06
SHMT2-203ENST00000449049 DAAM2Q86T65 1068 aa14.69□□□□□ -0.06
SHMT2-203ENST00000449049 HS6ST3Q8IZP7 471 aa14.69□□□□□ -0.06
SHMT2-203ENST00000449049 SYCE1Q8N0S2 351 aa14.69□□□□□ -0.06
SHMT2-203ENST00000449049 EDEM1Q92611 657 aa14.69□□□□□ -0.06
SHMT2-203ENST00000449049 MTPAPQ9NVV4 582 aaKnown RBP eCLIP14.69□□□□□ -0.06
SHMT2-203ENST00000449049 RRN3Q9NYV6 651 aa14.69□□□□□ -0.06
SHMT2-203ENST00000449049 CCDC195A0A1B0GUA6 201 aa14.68□□□□□ -0.06
SHMT2-203ENST00000449049 LINC01565O15544 149 aa14.68□□□□□ -0.06
SHMT2-203ENST00000449049 ZNF500O60304 480 aaPredicted RBP14.68□□□□□ -0.06
SHMT2-203ENST00000449049 SRGAP2BP0DMP2 458 aa14.68□□□□□ -0.06
SHMT2-203ENST00000449049 PTPN2P17706 415 aa14.68□□□□□ -0.06
SHMT2-203ENST00000449049 ADAM15Q13444 863 aa14.68□□□□□ -0.06
SHMT2-203ENST00000449049 ZNF569Q5MCW4 686 aa14.68□□□□□ -0.06
SHMT2-203ENST00000449049 MSANTD2Q6P1R3 559 aa14.68□□□□□ -0.06
SHMT2-203ENST00000449049 CENPIQ92674 756 aaPredicted RBP14.68□□□□□ -0.06
SHMT2-203ENST00000449049 CORO1BQ9BR76 489 aa14.68□□□□□ -0.06
SHMT2-203ENST00000449049 ADAM33Q9BZ11 813 aa14.68□□□□□ -0.06
SHMT2-203ENST00000449049 GOLPH3Q9H4A6 298 aa14.68□□□□□ -0.06
SHMT2-203ENST00000449049 ASAH2Q9NR71 780 aa14.68□□□□□ -0.06
SHMT2-203ENST00000449049 HCFC1R1Q9NWW0 138 aa14.68□□□□□ -0.06
SHMT2-203ENST00000449049 TRPM5Q9NZQ8 1165 aa14.68□□□□□ -0.06
SHMT2-203ENST00000449049 DNMT3BQ9UBC3 853 aaKnown RBP14.68□□□□□ -0.06
SHMT2-203ENST00000449049 ALG6Q9Y672 507 aa14.68□□□□□ -0.06
SHMT2-203ENST00000449049 SPDYE4A6NLX3 237 aa14.68□□□□□ -0.06
SHMT2-203ENST00000449049 TMEM110-MUSTN1A8MSY1 372 aa14.68□□□□□ -0.06
SHMT2-203ENST00000449049 FGF19O95750 216 aa14.68□□□□□ -0.06
SHMT2-203ENST00000449049 RALAP11233 206 aa14.68□□□□□ -0.06
SHMT2-203ENST00000449049 RARGP13631 454 aa14.68□□□□□ -0.06
SHMT2-203ENST00000449049 SLC1A1P43005 524 aa14.68□□□□□ -0.06
SHMT2-203ENST00000449049 TUBP50607 506 aa14.68□□□□□ -0.06
SHMT2-203ENST00000449049 COL19A1Q14993 1142 aa14.68□□□□□ -0.06
SHMT2-203ENST00000449049 C15orf59Q2T9L4 293 aaPredicted RBP14.68□□□□□ -0.06
SHMT2-203ENST00000449049 PABPC1LQ4VXU2 614 aaKnown RBP14.68□□□□□ -0.06
SHMT2-203ENST00000449049 SLC35F6Q8N357 371 aa14.68□□□□□ -0.06
SHMT2-203ENST00000449049 LEMD2Q8NC56 503 aa14.68□□□□□ -0.06
SHMT2-203ENST00000449049 GADD45GIP1Q8TAE8 222 aaPredicted RBP14.68□□□□□ -0.06
SHMT2-203ENST00000449049 DQX1Q8TE96 717 aaKnown RBP14.68□□□□□ -0.06
SHMT2-203ENST00000449049 PGAP3Q96FM1 320 aaPredicted RBP14.68□□□□□ -0.06
SHMT2-203ENST00000449049 TBCBQ99426 244 aa14.68□□□□□ -0.06
SHMT2-203ENST00000449049 TRANK1O15050 2925 aa14.67□□□□□ -0.06
SHMT2-203ENST00000449049 ENDOD1O94919 500 aa14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms