RNA–Protein interactions for RNA: ENST00000447734.5

PMS1-216, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5

Gene PMS1, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-216ENST00000447734 PRICKLE4Q2TBC4 344 aa4.17□□□□□ -1.74
PMS1-216ENST00000447734 BMP2KLQ5H9B9 411 aa4.17□□□□□ -1.74
PMS1-216ENST00000447734 ADGRF1Q5T601 910 aa4.17□□□□□ -1.74
PMS1-216ENST00000447734 DEPDC1Q5TB30 811 aa4.17□□□□□ -1.74
PMS1-216ENST00000447734 IL27RAQ6UWB1 636 aa4.17□□□□□ -1.74
PMS1-216ENST00000447734 RASGRP2Q7LDG7 609 aa4.17□□□□□ -1.74
PMS1-216ENST00000447734 PPP1R32Q7Z5V6 425 aa4.17□□□□□ -1.74
PMS1-216ENST00000447734 CCDC91Q7Z6B0 441 aa4.17□□□□□ -1.74
PMS1-216ENST00000447734 FRMD5Q7Z6J6 570 aa4.17□□□□□ -1.74
PMS1-216ENST00000447734 TRABD2AQ86V40 505 aa4.17□□□□□ -1.74
PMS1-216ENST00000447734 RHOT2Q8IXI1 618 aa4.17□□□□□ -1.74
PMS1-216ENST00000447734 CNTROBQ8N137 903 aa4.17□□□□□ -1.74
PMS1-216ENST00000447734 OR8H3Q8N146 312 aa4.17□□□□□ -1.74
PMS1-216ENST00000447734 LINS1Q8NG48 757 aa4.17□□□□□ -1.74
PMS1-216ENST00000447734 GOT1L1Q8NHS2 421 aaPredicted RBP4.17□□□□□ -1.74
PMS1-216ENST00000447734 ZCCHC10Q8TBK6 192 aa4.17□□□□□ -1.74
PMS1-216ENST00000447734 BPIFB1Q8TDL5 484 aa4.17□□□□□ -1.74
PMS1-216ENST00000447734 SCFD2Q8WU76 684 aa4.17□□□□□ -1.74
PMS1-216ENST00000447734 MYLIPQ8WY64 445 aa4.17□□□□□ -1.74
PMS1-216ENST00000447734 TBC1D31Q96DN5 1066 aa4.17□□□□□ -1.74
PMS1-216ENST00000447734 KIF1BPQ96EK5 621 aa4.17□□□□□ -1.74
PMS1-216ENST00000447734 ZNF668Q96K58 619 aaPredicted RBP4.17□□□□□ -1.74
PMS1-216ENST00000447734 SLC46A1Q96NT5 459 aa4.17□□□□□ -1.74
PMS1-216ENST00000447734 NCAPGQ9BPX3 1015 aa4.17□□□□□ -1.74
PMS1-216ENST00000447734 NUDT22Q9BRQ3 303 aa4.17□□□□□ -1.74
PMS1-216ENST00000447734 GPATCH1Q9BRR8 931 aaKnown RBP4.17□□□□□ -1.74
PMS1-216ENST00000447734 PHF7Q9BWX1 381 aaPredicted RBP4.17□□□□□ -1.74
PMS1-216ENST00000447734 MAK16Q9BXY0 300 aaKnown RBP4.17□□□□□ -1.74
PMS1-216ENST00000447734 SEZ6LQ9BYH1 1024 aa4.17□□□□□ -1.74
PMS1-216ENST00000447734 INTS2Q9H0H0 1204 aaKnown RBP4.17□□□□□ -1.74
PMS1-216ENST00000447734 ZCWPW1Q9H0M4 648 aa4.17□□□□□ -1.74
PMS1-216ENST00000447734 KCNH6Q9H252 994 aa4.17□□□□□ -1.74
PMS1-216ENST00000447734 GSTO2Q9H4Y5 243 aa4.17□□□□□ -1.74
PMS1-216ENST00000447734 PLEKHA2Q9HB19 425 aa4.17□□□□□ -1.74
PMS1-216ENST00000447734 PRDM7Q9NQW5 492 aa4.17□□□□□ -1.74
PMS1-216ENST00000447734 DNAJB11Q9UBS4 358 aa4.17□□□□□ -1.74
PMS1-216ENST00000447734 MORF4L1Q9UBU8 362 aa4.17□□□□□ -1.74
PMS1-216ENST00000447734 SEL1LQ9UBV2 794 aa4.17□□□□□ -1.74
PMS1-216ENST00000447734 RASAL2Q9UJF2 1139 aa4.17□□□□□ -1.74
PMS1-216ENST00000447734 CORO1CQ9ULV4 474 aaPredicted RBP4.17□□□□□ -1.74
PMS1-216ENST00000447734 SUFUQ9UMX1 484 aa4.17□□□□□ -1.74
PMS1-216ENST00000447734 USP22Q9UPT9 525 aa4.17□□□□□ -1.74
PMS1-216ENST00000447734 RUSC2Q8N2Y8 1516 aa4.16□□□□□ -1.74
PMS1-216ENST00000447734 CDHR4A6H8M9 788 aa4.16□□□□□ -1.74
PMS1-216ENST00000447734 C2orf78A6NCI8 922 aa4.16□□□□□ -1.74
PMS1-216ENST00000447734 NPIPB15A6NHN6 443 aaPredicted RBP4.16□□□□□ -1.74
PMS1-216ENST00000447734 SH2B2O14492 632 aaPredicted RBP4.16□□□□□ -1.74
PMS1-216ENST00000447734 DHHO43323 396 aa4.16□□□□□ -1.74
PMS1-216ENST00000447734 VPS4BO75351 444 aa4.16□□□□□ -1.74
PMS1-216ENST00000447734 TULP3O75386 442 aa4.16□□□□□ -1.74
PMS1-216ENST00000447734 SASH1O94885 1247 aa4.16□□□□□ -1.74
PMS1-216ENST00000447734 CER1O95813 267 aa4.16□□□□□ -1.74
PMS1-216ENST00000447734 AFPP02771 609 aaKnown RBP4.16□□□□□ -1.74
PMS1-216ENST00000447734 JUNP05412 331 aaKnown RBP4.16□□□□□ -1.74
PMS1-216ENST00000447734 CYP21A2P08686 494 aa4.16□□□□□ -1.74
PMS1-216ENST00000447734 WEE2P0C1S8 567 aa4.16□□□□□ -1.74
PMS1-216ENST00000447734 ATXN1LP0C7T5 689 aaKnown RBP4.16□□□□□ -1.74
PMS1-216ENST00000447734 CD8BP10966 210 aa4.16□□□□□ -1.74
PMS1-216ENST00000447734 FDXRP22570 491 aa4.16□□□□□ -1.74
PMS1-216ENST00000447734 PRKCHP24723 683 aa4.16□□□□□ -1.74
PMS1-216ENST00000447734 PSMA3P25788 255 aa4.16□□□□□ -1.74
PMS1-216ENST00000447734 GCH1P30793 250 aa4.16□□□□□ -1.74
PMS1-216ENST00000447734 BSGP35613 385 aa4.16□□□□□ -1.74
PMS1-216ENST00000447734 PPARGP37231 505 aaPredicted RBP4.16□□□□□ -1.74
PMS1-216ENST00000447734 ETV4P43268 484 aa4.16□□□□□ -1.74
PMS1-216ENST00000447734 GZMKP49863 264 aa4.16□□□□□ -1.74
PMS1-216ENST00000447734 ITGA1P56199 1179 aa4.16□□□□□ -1.74
PMS1-216ENST00000447734 RNASELQ05823 741 aaKnown RBP4.16□□□□□ -1.74
PMS1-216ENST00000447734 PTP4A2Q12974 167 aa4.16□□□□□ -1.74
PMS1-216ENST00000447734 P3H1Q32P28 736 aa4.16□□□□□ -1.74
PMS1-216ENST00000447734 ZNF569Q5MCW4 686 aa4.16□□□□□ -1.74
PMS1-216ENST00000447734 PLBD1Q6P4A8 553 aa4.16□□□□□ -1.74
PMS1-216ENST00000447734 ZNF449Q6P9G9 518 aa4.16□□□□□ -1.74
PMS1-216ENST00000447734 MED25Q71SY5 747 aa4.16□□□□□ -1.74
PMS1-216ENST00000447734 SPRED2Q7Z698 418 aa4.16□□□□□ -1.74
PMS1-216ENST00000447734 SLFN11Q7Z7L1 901 aa4.16□□□□□ -1.74
PMS1-216ENST00000447734 STK32CQ86UX6 486 aa4.16□□□□□ -1.74
PMS1-216ENST00000447734 ZNF280BQ86YH2 543 aa4.16□□□□□ -1.74
PMS1-216ENST00000447734 CEP97Q8IW35 865 aa4.16□□□□□ -1.74
PMS1-216ENST00000447734 ULK2Q8IYT8 1036 aa4.16□□□□□ -1.74
PMS1-216ENST00000447734 CARNMT1Q8N4J0 409 aa4.16□□□□□ -1.74
PMS1-216ENST00000447734 TBC1D15Q8TC07 691 aa4.16□□□□□ -1.74
PMS1-216ENST00000447734 CPA5Q8WXQ8 436 aa4.16□□□□□ -1.74
PMS1-216ENST00000447734 SNX21Q969T3 373 aa4.16□□□□□ -1.74
PMS1-216ENST00000447734 SLC7A6OSQ96CW6 309 aaPredicted RBP4.16□□□□□ -1.74
PMS1-216ENST00000447734 CCDC34Q96HJ3 373 aa4.16□□□□□ -1.74
PMS1-216ENST00000447734 GPR20Q99678 358 aa4.16□□□□□ -1.74
PMS1-216ENST00000447734 KRTAP9-3Q9BYQ3 159 aa4.16□□□□□ -1.74
PMS1-216ENST00000447734 TAOK3Q9H2K8 898 aa4.16□□□□□ -1.74
PMS1-216ENST00000447734 SMARCAD1Q9H4L7 1026 aa4.16□□□□□ -1.74
PMS1-216ENST00000447734 STN1Q9H668 368 aaKnown RBP4.16□□□□□ -1.74
PMS1-216ENST00000447734 CCDC134Q9H6E4 229 aa4.16□□□□□ -1.74
PMS1-216ENST00000447734 XAB2Q9HCS7 855 aaKnown RBP4.16□□□□□ -1.74
PMS1-216ENST00000447734 MRPS18AQ9NVS2 196 aaKnown RBP4.16□□□□□ -1.74
PMS1-216ENST00000447734 ZDHHC7Q9NXF8 308 aa4.16□□□□□ -1.74
PMS1-216ENST00000447734 PPP1R14DQ9NXH3 145 aa4.16□□□□□ -1.74
PMS1-216ENST00000447734 NCDNQ9UBB6 729 aa4.16□□□□□ -1.74
PMS1-216ENST00000447734 SARDHQ9UL12 918 aa4.16□□□□□ -1.74
PMS1-216ENST00000447734 PLA2G2DQ9UNK4 145 aa4.16□□□□□ -1.74
PMS1-216ENST00000447734 SLC5A6Q9Y289 635 aa4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms