RNA–Protein interactions for RNA: ENST00000445497.1

UBBP3-201, Transcript of ubiquitin B pseudogene 3, humanhuman

BASIC

Gene UBBP3, Length 241 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP3-201ENST00000445497 AFMIDQ63HM1 303 aa2.91□□□□□ -1.94
UBBP3-201ENST00000445497 NAIF1Q69YI7 327 aaPredicted RBP2.91□□□□□ -1.94
UBBP3-201ENST00000445497 SCARA3Q6AZY7 606 aa2.91□□□□□ -1.94
UBBP3-201ENST00000445497 HEPHL1Q6MZM0 1159 aa2.91□□□□□ -1.94
UBBP3-201ENST00000445497 CASC4Q6P4E1 433 aa2.91□□□□□ -1.94
UBBP3-201ENST00000445497 GALNT18Q6P9A2 607 aa2.91□□□□□ -1.94
UBBP3-201ENST00000445497 CNKSR3Q6P9H4 555 aa2.91□□□□□ -1.94
UBBP3-201ENST00000445497 TRIM65Q6PJ69 517 aa2.91□□□□□ -1.94
UBBP3-201ENST00000445497 FAM111BQ6SJ93 734 aa2.91□□□□□ -1.94
UBBP3-201ENST00000445497 AFTPHQ6ULP2 937 aa2.91□□□□□ -1.94
UBBP3-201ENST00000445497 HHIPL2Q6UWX4 724 aa2.91□□□□□ -1.94
UBBP3-201ENST00000445497 DPP8Q6V1X1 898 aaPredicted RBP2.91□□□□□ -1.94
UBBP3-201ENST00000445497 TPTE2Q6XPS3 522 aa2.91□□□□□ -1.94
UBBP3-201ENST00000445497 ATG14Q6ZNE5 492 aa2.91□□□□□ -1.94
UBBP3-201ENST00000445497 CATSPERGQ6ZRH7 1159 aa2.91□□□□□ -1.94
UBBP3-201ENST00000445497 PRR23CQ6ZRP0 262 aa2.91□□□□□ -1.94
UBBP3-201ENST00000445497 PPP1R3FQ6ZSY5 799 aaPredicted RBP2.91□□□□□ -1.94
UBBP3-201ENST00000445497 BBS12Q6ZW61 710 aa2.91□□□□□ -1.94
UBBP3-201ENST00000445497 OTOAQ7RTW8 1153 aa2.91□□□□□ -1.94
UBBP3-201ENST00000445497 KRT28Q7Z3Y7 464 aa2.91□□□□□ -1.94
UBBP3-201ENST00000445497 TMCO2Q7Z6W1 182 aaPredicted RBP2.91□□□□□ -1.94
UBBP3-201ENST00000445497 ADGRA1Q86SQ6 560 aa2.91□□□□□ -1.94
UBBP3-201ENST00000445497 GLRX5Q86SX6 157 aa2.91□□□□□ -1.94
UBBP3-201ENST00000445497 TLK2Q86UE8 772 aa2.91□□□□□ -1.94
UBBP3-201ENST00000445497 SLC22A9Q8IVM8 553 aa2.91□□□□□ -1.94
UBBP3-201ENST00000445497 KSR1Q8IVT5 923 aa2.91□□□□□ -1.94
UBBP3-201ENST00000445497 HERC6Q8IVU3 1022 aa2.91□□□□□ -1.94
UBBP3-201ENST00000445497 MAPKAPK5Q8IW41 473 aa2.91□□□□□ -1.94
UBBP3-201ENST00000445497 PHF6Q8IWS0 365 aaKnown RBP eCLIP2.91□□□□□ -1.94
UBBP3-201ENST00000445497 DIS3L2Q8IYB7 885 aaKnown RBP2.91□□□□□ -1.94
UBBP3-201ENST00000445497 ALDH16A1Q8IZ83 802 aa2.91□□□□□ -1.94
UBBP3-201ENST00000445497 CARFQ8N187 725 aa2.91□□□□□ -1.94
UBBP3-201ENST00000445497 C17orf53Q8N3J3 647 aaPredicted RBP2.91□□□□□ -1.94
UBBP3-201ENST00000445497 TXLNBQ8N3L3 684 aa2.91□□□□□ -1.94
UBBP3-201ENST00000445497 USHBP1Q8N6Y0 703 aa2.91□□□□□ -1.94
UBBP3-201ENST00000445497 EFHBQ8N7U6 833 aa2.91□□□□□ -1.94
UBBP3-201ENST00000445497 IGSF22Q8N9C0 903 aa2.91□□□□□ -1.94
UBBP3-201ENST00000445497 SYT2Q8N9I0 419 aaPredicted RBP2.91□□□□□ -1.94
UBBP3-201ENST00000445497 TDRD5Q8NAT2 981 aaKnown RBP2.91□□□□□ -1.94
UBBP3-201ENST00000445497 POGLUT1Q8NBL1 392 aa2.91□□□□□ -1.94
UBBP3-201ENST00000445497 C3orf20Q8ND61 904 aa2.91□□□□□ -1.94
UBBP3-201ENST00000445497 SETD9Q8NE22 299 aa2.91□□□□□ -1.94
UBBP3-201ENST00000445497 OR8K5Q8NH50 307 aa2.91□□□□□ -1.94
UBBP3-201ENST00000445497 GIMAP7Q8NHV1 300 aa2.91□□□□□ -1.94
UBBP3-201ENST00000445497 CDC26Q8NHZ8 85 aa2.91□□□□□ -1.94
UBBP3-201ENST00000445497 FAM71BQ8TC56 605 aa2.91□□□□□ -1.94
UBBP3-201ENST00000445497 URGCPQ8TCY9 931 aa2.91□□□□□ -1.94
UBBP3-201ENST00000445497 PANK1Q8TE04 598 aa2.91□□□□□ -1.94
UBBP3-201ENST00000445497 PAQR8Q8TEZ7 354 aa2.91□□□□□ -1.94
UBBP3-201ENST00000445497 PDCD6IPQ8WUM4 868 aaKnown RBP2.91□□□□□ -1.94
UBBP3-201ENST00000445497 BCL7CQ8WUZ0 217 aaPredicted RBP2.91□□□□□ -1.94
UBBP3-201ENST00000445497 DYDC1Q8WWB3 177 aa2.91□□□□□ -1.94
UBBP3-201ENST00000445497 MAIP1Q8WWC4 291 aa2.91□□□□□ -1.94
UBBP3-201ENST00000445497 METTL21AQ8WXB1 218 aa2.91□□□□□ -1.94
UBBP3-201ENST00000445497 JADE3Q92613 823 aa2.91□□□□□ -1.94
UBBP3-201ENST00000445497 PRCCQ92733 491 aaPredicted RBP2.91□□□□□ -1.94
UBBP3-201ENST00000445497 DPF1Q92782 380 aa2.91□□□□□ -1.94
UBBP3-201ENST00000445497 PEX13Q92968 403 aa2.91□□□□□ -1.94
UBBP3-201ENST00000445497 COA7Q96BR5 231 aa2.91□□□□□ -1.94
UBBP3-201ENST00000445497 OPTNQ96CV9 577 aa2.91□□□□□ -1.94
UBBP3-201ENST00000445497 MTFMTQ96DP5 389 aaKnown RBP2.91□□□□□ -1.94
UBBP3-201ENST00000445497 KTI12Q96EK9 354 aaPredicted RBP2.91□□□□□ -1.94
UBBP3-201ENST00000445497 RNF125Q96EQ8 232 aa2.91□□□□□ -1.94
UBBP3-201ENST00000445497 EDC3Q96F86 508 aaKnown RBP2.91□□□□□ -1.94
UBBP3-201ENST00000445497 ERO1AQ96HE7 468 aa2.91□□□□□ -1.94
UBBP3-201ENST00000445497 NGLY1Q96IV0 654 aa2.91□□□□□ -1.94
UBBP3-201ENST00000445497 ZNF560Q96MR9 790 aa2.91□□□□□ -1.94
UBBP3-201ENST00000445497 CAMK1GQ96NX5 476 aa2.91□□□□□ -1.94
UBBP3-201ENST00000445497 GAL3ST4Q96RP7 486 aa2.91□□□□□ -1.94
UBBP3-201ENST00000445497 WRNIP1Q96S55 665 aa2.91□□□□□ -1.94
UBBP3-201ENST00000445497 NEU1Q99519 415 aa2.91□□□□□ -1.94
UBBP3-201ENST00000445497 ZBTB18Q99592 522 aa2.91□□□□□ -1.94
UBBP3-201ENST00000445497 SSX3Q99909 188 aa2.91□□□□□ -1.94
UBBP3-201ENST00000445497 ZFYVE21Q9BQ24 234 aa2.91□□□□□ -1.94
UBBP3-201ENST00000445497 C9orf16Q9BUW7 83 aa2.91□□□□□ -1.94
UBBP3-201ENST00000445497 PUS3Q9BZE2 481 aaKnown RBP2.91□□□□□ -1.94
UBBP3-201ENST00000445497 IMPG2Q9BZV3 1241 aa2.91□□□□□ -1.94
UBBP3-201ENST00000445497 POLR1EQ9GZS1 481 aaKnown RBP2.91□□□□□ -1.94
UBBP3-201ENST00000445497 RAD21L1Q9H4I0 556 aa2.91□□□□□ -1.94
UBBP3-201ENST00000445497 TFB2MQ9H5Q4 396 aaKnown RBP2.91□□□□□ -1.94
UBBP3-201ENST00000445497 BICC1Q9H694 974 aaKnown RBP2.91□□□□□ -1.94
UBBP3-201ENST00000445497 SCPEP1Q9HB40 452 aa2.91□□□□□ -1.94
UBBP3-201ENST00000445497 LY9Q9HBG7 655 aa2.91□□□□□ -1.94
UBBP3-201ENST00000445497 ZNF287Q9HBT7 754 aa2.91□□□□□ -1.94
UBBP3-201ENST00000445497 SPACA1Q9HBV2 294 aa2.91□□□□□ -1.94
UBBP3-201ENST00000445497 IL26Q9NPH9 171 aa2.91□□□□□ -1.94
UBBP3-201ENST00000445497 NRIP3Q9NQ35 241 aa2.91□□□□□ -1.94
UBBP3-201ENST00000445497 DECR2Q9NUI1 292 aa2.91□□□□□ -1.94
UBBP3-201ENST00000445497 HCFC1R1Q9NWW0 138 aa2.91□□□□□ -1.94
UBBP3-201ENST00000445497 THG1LQ9NWX6 298 aaKnown RBP2.91□□□□□ -1.94
UBBP3-201ENST00000445497 VPS54Q9P1Q0 977 aa2.91□□□□□ -1.94
UBBP3-201ENST00000445497 WHRNQ9P202 907 aa2.91□□□□□ -1.94
UBBP3-201ENST00000445497 STX18Q9P2W9 335 aaKnown RBP2.91□□□□□ -1.94
UBBP3-201ENST00000445497 COPG2Q9UBF2 871 aa2.91□□□□□ -1.94
UBBP3-201ENST00000445497 IPO11Q9UI26 975 aaKnown RBP2.91□□□□□ -1.94
UBBP3-201ENST00000445497 RABGEF1Q9UJ41 708 aa2.91□□□□□ -1.94
UBBP3-201ENST00000445497 FEM1BQ9UK73 627 aa2.91□□□□□ -1.94
UBBP3-201ENST00000445497 VAV3Q9UKW4 847 aa2.91□□□□□ -1.94
UBBP3-201ENST00000445497 OGDHLQ9ULD0 1010 aa2.91□□□□□ -1.94
UBBP3-201ENST00000445497 TTC7AQ9ULT0 858 aaPredicted RBP2.91□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms