RNA–Protein interactions for RNA: ENST00000444712.5

SNX13-204, Transcript of sorting nexin 13, humanhuman

TSL 5

Gene SNX13, Length 2,018 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-204ENST00000444712 THEM5Q8N1Q8 247 aa16.33■□□□□ 0.21
SNX13-204ENST00000444712 PCED1BQ96HM7 432 aa16.33■□□□□ 0.21
SNX13-204ENST00000444712 SERPINB12Q96P63 405 aa16.33■□□□□ 0.21
SNX13-204ENST00000444712 RBM15Q96T37 977 aaKnown RBP eCLIP16.33■□□□□ 0.214e-7■■□□□ 11.6
SNX13-204ENST00000444712 POPDC2Q9HBU9 364 aa16.33■□□□□ 0.21
SNX13-204ENST00000444712 RRN3Q9NYV6 651 aa16.33■□□□□ 0.21
SNX13-204ENST00000444712 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP16.33■□□□□ 0.2
SNX13-204ENST00000444712 SRRM3A6NNA2 597 aaPredicted RBP16.33■□□□□ 0.2
SNX13-204ENST00000444712 FKTNO75072 461 aa16.33■□□□□ 0.2
SNX13-204ENST00000444712 TCEA3O75764 348 aa16.33■□□□□ 0.2
SNX13-204ENST00000444712 PECAM1P16284 738 aaPredicted RBP16.33■□□□□ 0.2
SNX13-204ENST00000444712 TYMPP19971 482 aa16.33■□□□□ 0.2
SNX13-204ENST00000444712 MAP3K7CLP57077 242 aa16.33■□□□□ 0.2
SNX13-204ENST00000444712 ZC3H12AQ5D1E8 599 aaKnown RBP16.33■□□□□ 0.2
SNX13-204ENST00000444712 KIAA0319Q5VV43 1072 aa16.33■□□□□ 0.2
SNX13-204ENST00000444712 C4orf22Q6V702 233 aa16.33■□□□□ 0.2
SNX13-204ENST00000444712 CENPUQ71F23 418 aa16.33■□□□□ 0.2
SNX13-204ENST00000444712 GLIS1Q8NBF1 620 aa16.33■□□□□ 0.2
SNX13-204ENST00000444712 URGCPQ8TCY9 931 aa16.33■□□□□ 0.2
SNX13-204ENST00000444712 SLC2A13Q96QE2 648 aa16.33■□□□□ 0.2
SNX13-204ENST00000444712 SAE1Q9UBE0 346 aaPredicted RBP16.33■□□□□ 0.2
SNX13-204ENST00000444712 PTPRDP23468 1912 aa16.32■□□□□ 0.2
SNX13-204ENST00000444712 KBTBD13C9JR72 458 aa16.32■□□□□ 0.2
SNX13-204ENST00000444712 EIF3HO15372 352 aaKnown RBP eCLIP16.32■□□□□ 0.2
SNX13-204ENST00000444712 ACSL3O95573 720 aa16.32■□□□□ 0.2
SNX13-204ENST00000444712 ZSCAN5DPP0CG00 497 aa16.32■□□□□ 0.2
SNX13-204ENST00000444712 HPDP32754 393 aaPredicted RBP16.32■□□□□ 0.2
SNX13-204ENST00000444712 ARL4AP40617 200 aa16.32■□□□□ 0.2
SNX13-204ENST00000444712 NR2C2P49116 596 aa16.32■□□□□ 0.2
SNX13-204ENST00000444712 IRAK1P51617 712 aa16.32■□□□□ 0.2
SNX13-204ENST00000444712 TKTL1P51854 596 aa16.32■□□□□ 0.2
SNX13-204ENST00000444712 RAB6CQ53S08 254 aa16.32■□□□□ 0.2
SNX13-204ENST00000444712 INTS6LQ5JSJ4 861 aaKnown RBP16.32■□□□□ 0.2
SNX13-204ENST00000444712 RAB41Q5JT25 222 aa16.32■□□□□ 0.2
SNX13-204ENST00000444712 LHX8Q68G74 356 aa16.32■□□□□ 0.2
SNX13-204ENST00000444712 TAOK1Q7L7X3 1001 aa16.32■□□□□ 0.2
SNX13-204ENST00000444712 PLD5Q8N7P1 536 aa16.32■□□□□ 0.2
SNX13-204ENST00000444712 NT5C3BQ969T7 300 aa16.32■□□□□ 0.2
SNX13-204ENST00000444712 TRIM62Q9BVG3 475 aa16.32■□□□□ 0.2
SNX13-204ENST00000444712 OSBPL7Q9BZF2 842 aa16.32■□□□□ 0.2
SNX13-204ENST00000444712 RAB6CQ9H0N0 254 aa16.32■□□□□ 0.2
SNX13-204ENST00000444712 DHX35Q9H5Z1 703 aaKnown RBP16.32■□□□□ 0.2
SNX13-204ENST00000444712 NINJ2Q9NZG7 142 aa16.32■□□□□ 0.2
SNX13-204ENST00000444712 KANSL3Q9P2N6 904 aa16.32■□□□□ 0.2
SNX13-204ENST00000444712 CACNG4Q9UBN1 327 aa16.32■□□□□ 0.2
SNX13-204ENST00000444712 INPP5FQ9Y2H2 1132 aa16.32■□□□□ 0.2
SNX13-204ENST00000444712 FARP1Q9Y4F1 1045 aaPredicted RBP16.32■□□□□ 0.2
SNX13-204ENST00000444712 TLDC2A0PJX2 215 aa16.31■□□□□ 0.2
SNX13-204ENST00000444712 C9IYK1 514 aa16.31■□□□□ 0.2
SNX13-204ENST00000444712 H7C0C1 242 aa16.31■□□□□ 0.2
SNX13-204ENST00000444712 ARVCFO00192 962 aa16.31■□□□□ 0.2
SNX13-204ENST00000444712 ZNF189O75820 626 aaPredicted RBP16.31■□□□□ 0.2
SNX13-204ENST00000444712 COL6A1P12109 1028 aa16.31■□□□□ 0.2
SNX13-204ENST00000444712 ETS1P14921 441 aa16.31■□□□□ 0.2
SNX13-204ENST00000444712 IL4RP24394 825 aa16.31■□□□□ 0.2
SNX13-204ENST00000444712 L1CAMP32004 1257 aa16.31■□□□□ 0.2
SNX13-204ENST00000444712 GRK4P32298 578 aa16.31■□□□□ 0.2
SNX13-204ENST00000444712 MDH1P40925 334 aaKnown RBP16.31■□□□□ 0.2
SNX13-204ENST00000444712 MAGEA4P43358 317 aa16.31■□□□□ 0.2
SNX13-204ENST00000444712 ATP5OP48047 213 aa16.31■□□□□ 0.2
SNX13-204ENST00000444712 CTCFP49711 727 aaPredicted RBP16.31■□□□□ 0.2
SNX13-204ENST00000444712 ATP1A2P50993 1020 aa16.31■□□□□ 0.2
SNX13-204ENST00000444712 MAGOHP61326 146 aaKnown RBP16.31■□□□□ 0.2
SNX13-204ENST00000444712 XRCC4Q13426 336 aa16.31■□□□□ 0.2
SNX13-204ENST00000444712 STAT4Q14765 748 aa16.31■□□□□ 0.2
SNX13-204ENST00000444712 PPP6R3Q5H9R7 873 aaPredicted RBP16.31■□□□□ 0.2
SNX13-204ENST00000444712 BZW1Q7L1Q6 419 aaKnown RBP16.31■□□□□ 0.2
SNX13-204ENST00000444712 CDKL3Q8IVW4 592 aaPredicted RBP16.31■□□□□ 0.2
SNX13-204ENST00000444712 RSPH1Q8WYR4 309 aa16.31■□□□□ 0.2
SNX13-204ENST00000444712 SUSD3Q96L08 255 aa16.31■□□□□ 0.2
SNX13-204ENST00000444712 SLC9A7Q96T83 725 aa16.31■□□□□ 0.2
SNX13-204ENST00000444712 NPY6RQ99463 290 aa16.31■□□□□ 0.2
SNX13-204ENST00000444712 CSNK1G1Q9HCP0 422 aa16.31■□□□□ 0.2
SNX13-204ENST00000444712 PNPLA8Q9NP80 782 aa16.31■□□□□ 0.2
SNX13-204ENST00000444712 GPATCH2LQ9NWQ4 482 aa16.31■□□□□ 0.2
SNX13-204ENST00000444712 PHF24Q9UPV7 400 aa16.31■□□□□ 0.2
SNX13-204ENST00000444712 BCLAF3A2AJT9 711 aaKnown RBP16.31■□□□□ 0.2
SNX13-204ENST00000444712 MYBPHLA2RUH7 354 aa16.31■□□□□ 0.2
SNX13-204ENST00000444712 BEST1O76090 585 aa16.31■□□□□ 0.2
SNX13-204ENST00000444712 CYP2F1P24903 491 aa16.31■□□□□ 0.2
SNX13-204ENST00000444712 ARL4CP56559 192 aa16.31■□□□□ 0.2
SNX13-204ENST00000444712 DAOAP59103 153 aa16.31■□□□□ 0.2
SNX13-204ENST00000444712 TSPY1Q01534 308 aa16.31■□□□□ 0.2
SNX13-204ENST00000444712 KYNUQ16719 465 aa16.31■□□□□ 0.2
SNX13-204ENST00000444712 DCAF6Q58WW2 860 aa16.31■□□□□ 0.2
SNX13-204ENST00000444712 FAM171BQ6P995 826 aa16.31■□□□□ 0.2
SNX13-204ENST00000444712 PPP1R21Q6ZMI0 780 aa16.31■□□□□ 0.2
SNX13-204ENST00000444712 PRUNE1Q86TP1 453 aa16.31■□□□□ 0.2
SNX13-204ENST00000444712 SCML4Q8N228 414 aa16.31■□□□□ 0.2
SNX13-204ENST00000444712 RIBC1Q8N443 379 aaPredicted RBP16.31■□□□□ 0.2
SNX13-204ENST00000444712 PQLC3Q8N755 202 aa16.31■□□□□ 0.2
SNX13-204ENST00000444712 PCDH19Q8TAB3 1148 aa16.31■□□□□ 0.2
SNX13-204ENST00000444712 IRGQQ8WZA9 623 aa16.31■□□□□ 0.2
SNX13-204ENST00000444712 PRCCQ92733 491 aaPredicted RBP16.31■□□□□ 0.2
SNX13-204ENST00000444712 RTP4Q96DX8 246 aa16.31■□□□□ 0.2
SNX13-204ENST00000444712 SMOQ99835 787 aa16.31■□□□□ 0.2
SNX13-204ENST00000444712 PAAF1Q9BRP4 392 aa16.31■□□□□ 0.2
SNX13-204ENST00000444712 NRDE2Q9H7Z3 1164 aa16.31■□□□□ 0.2
SNX13-204ENST00000444712 PPCSQ9HAB8 311 aa16.31■□□□□ 0.2
SNX13-204ENST00000444712 CWC15Q9P013 229 aaKnown RBP16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms