RNA–Protein interactions for RNA: ENST00000443561.3

PDLIM2-212, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 701 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-212ENST00000443561 ADAM33Q9BZ11 813 aa13.49□□□□□ -0.25
PDLIM2-212ENST00000443561 RBSNQ9H1K0 784 aa13.49□□□□□ -0.25
PDLIM2-212ENST00000443561 LHX5Q9H2C1 402 aa13.49□□□□□ -0.25
PDLIM2-212ENST00000443561 TRPV5Q9NQA5 729 aa13.49□□□□□ -0.25
PDLIM2-212ENST00000443561 CNGB3Q9NQW8 809 aa13.49□□□□□ -0.25
PDLIM2-212ENST00000443561 ARHGEF3Q9NR81 526 aa13.49□□□□□ -0.25
PDLIM2-212ENST00000443561 TLR8Q9NR97 1041 aaKnown RBP13.49□□□□□ -0.25
PDLIM2-212ENST00000443561 CLIC5Q9NZA1 410 aa13.49□□□□□ -0.25
PDLIM2-212ENST00000443561 EHD2Q9NZN4 543 aa13.49□□□□□ -0.25
PDLIM2-212ENST00000443561 WNT16Q9UBV4 365 aa13.49□□□□□ -0.25
PDLIM2-212ENST00000443561 NAGPAQ9UK23 515 aa13.49□□□□□ -0.25
PDLIM2-212ENST00000443561 MTF2Q9Y483 593 aaPredicted RBP13.49□□□□□ -0.25
PDLIM2-212ENST00000443561 PI15O43692 258 aa13.48□□□□□ -0.25
PDLIM2-212ENST00000443561 KLKB1P03952 638 aa13.48□□□□□ -0.25
PDLIM2-212ENST00000443561 CYP1A1P04798 512 aaPredicted RBP13.48□□□□□ -0.25
PDLIM2-212ENST00000443561 GLULP15104 373 aa13.48□□□□□ -0.25
PDLIM2-212ENST00000443561 CD72P21854 359 aa13.48□□□□□ -0.25
PDLIM2-212ENST00000443561 PTK2Q05397 1052 aa13.48□□□□□ -0.25
PDLIM2-212ENST00000443561 PTP4A2Q12974 167 aa13.48□□□□□ -0.25
PDLIM2-212ENST00000443561 MLF2Q15773 248 aaPredicted RBP13.48□□□□□ -0.25
PDLIM2-212ENST00000443561 C2CD6Q53TS8 623 aa13.48□□□□□ -0.25
PDLIM2-212ENST00000443561 OTUD1Q5VV17 481 aaPredicted RBP13.48□□□□□ -0.25
PDLIM2-212ENST00000443561 TRNP1Q6NT89 227 aa13.48□□□□□ -0.25
PDLIM2-212ENST00000443561 OLFML1Q6UWY5 402 aa13.48□□□□□ -0.25
PDLIM2-212ENST00000443561 Q6ZNB5 142 aa13.48□□□□□ -0.25
PDLIM2-212ENST00000443561 IRF2BP2Q7Z5L9 587 aa13.48□□□□□ -0.25
PDLIM2-212ENST00000443561 TTC8Q8TAM2 541 aa13.48□□□□□ -0.25
PDLIM2-212ENST00000443561 EDEM1Q92611 657 aa13.48□□□□□ -0.25
PDLIM2-212ENST00000443561 DNASE1L2Q92874 299 aa13.48□□□□□ -0.25
PDLIM2-212ENST00000443561 E2F7Q96AV8 911 aa13.48□□□□□ -0.25
PDLIM2-212ENST00000443561 FOXQ1Q9C009 403 aa13.48□□□□□ -0.25
PDLIM2-212ENST00000443561 XPO4Q9C0E2 1151 aaKnown RBP13.48□□□□□ -0.25
PDLIM2-212ENST00000443561 MIS12Q9H081 205 aa13.48□□□□□ -0.25
PDLIM2-212ENST00000443561 BRD9Q9H8M2 597 aa13.48□□□□□ -0.25
PDLIM2-212ENST00000443561 LRRC4Q9HBW1 653 aa13.48□□□□□ -0.25
PDLIM2-212ENST00000443561 CFAP97Q9P2B7 532 aa13.48□□□□□ -0.25
PDLIM2-212ENST00000443561 DAAM1Q9Y4D1 1078 aa13.48□□□□□ -0.25
PDLIM2-212ENST00000443561 ATG2BQ96BY7 2078 aa13.48□□□□□ -0.25
PDLIM2-212ENST00000443561 ANTXRLA6NF34 631 aa13.47□□□□□ -0.25
PDLIM2-212ENST00000443561 LRRC53A6NM62 1247 aa13.47□□□□□ -0.25
PDLIM2-212ENST00000443561 ZNF263O14978 683 aa13.47□□□□□ -0.25
PDLIM2-212ENST00000443561 MED7O43513 233 aa13.47□□□□□ -0.25
PDLIM2-212ENST00000443561 STC2O76061 302 aa13.47□□□□□ -0.25
PDLIM2-212ENST00000443561 SERPINC1P01008 464 aa13.47□□□□□ -0.25
PDLIM2-212ENST00000443561 GYPCP04921 128 aa13.47□□□□□ -0.25
PDLIM2-212ENST00000443561 TPM2P07951 284 aa13.47□□□□□ -0.25
PDLIM2-212ENST00000443561 CHRM1P11229 460 aaPredicted RBP13.47□□□□□ -0.25
PDLIM2-212ENST00000443561 UBASH3AP57075 661 aa13.47□□□□□ -0.25
PDLIM2-212ENST00000443561 STARD6P59095 220 aa13.47□□□□□ -0.25
PDLIM2-212ENST00000443561 MESP2Q0VG99 397 aa13.47□□□□□ -0.25
PDLIM2-212ENST00000443561 ARHGAP29Q52LW3 1261 aa13.47□□□□□ -0.25
PDLIM2-212ENST00000443561 SLC44A4Q53GD3 710 aa13.47□□□□□ -0.25
PDLIM2-212ENST00000443561 BSPRYQ5W0U4 402 aa13.47□□□□□ -0.25
PDLIM2-212ENST00000443561 MSANTD2Q6P1R3 559 aa13.47□□□□□ -0.25
PDLIM2-212ENST00000443561 KLHDC10Q6PID8 442 aa13.47□□□□□ -0.25
PDLIM2-212ENST00000443561 FAM183BPQ6ZVS7 135 aa13.47□□□□□ -0.25
PDLIM2-212ENST00000443561 SCUBE3Q8IX30 993 aa13.47□□□□□ -0.25
PDLIM2-212ENST00000443561 TMEM105Q8N8V8 129 aa13.47□□□□□ -0.25
PDLIM2-212ENST00000443561 OSCP1Q8WVF1 389 aa13.47□□□□□ -0.25
PDLIM2-212ENST00000443561 EZH1Q92800 747 aaPredicted RBP13.47□□□□□ -0.25
PDLIM2-212ENST00000443561 DNAI2Q9GZS0 605 aa13.47□□□□□ -0.25
PDLIM2-212ENST00000443561 EBF3Q9H4W6 596 aa13.47□□□□□ -0.25
PDLIM2-212ENST00000443561 TBC1D17Q9HA65 648 aa13.47□□□□□ -0.25
PDLIM2-212ENST00000443561 DLGAP2Q9P1A6 1054 aa13.47□□□□□ -0.25
PDLIM2-212ENST00000443561 CALCOCO1Q9P1Z2 691 aa13.47□□□□□ -0.25
PDLIM2-212ENST00000443561 PRR33A8MZF0 331 aa13.46□□□□□ -0.25
PDLIM2-212ENST00000443561 DPYSL4O14531 572 aa13.46□□□□□ -0.25
PDLIM2-212ENST00000443561 MSI1O43347 362 aaKnown RBP13.46□□□□□ -0.25
PDLIM2-212ENST00000443561 LTFP02788 710 aa13.46□□□□□ -0.25
PDLIM2-212ENST00000443561 CYP17A1P05093 508 aa13.46□□□□□ -0.25
PDLIM2-212ENST00000443561 IRF1P10914 325 aa13.46□□□□□ -0.25
PDLIM2-212ENST00000443561 TARSP26639 723 aaKnown RBP13.46□□□□□ -0.25
PDLIM2-212ENST00000443561 STAT1P42224 750 aa13.46□□□□□ -0.25
PDLIM2-212ENST00000443561 PDE6CP51160 858 aa13.46□□□□□ -0.25
PDLIM2-212ENST00000443561 CDR2Q01850 454 aa13.46□□□□□ -0.25
PDLIM2-212ENST00000443561 EFEMP1Q12805 493 aa13.46□□□□□ -0.25
PDLIM2-212ENST00000443561 EIF4EBP2Q13542 120 aaPredicted RBP13.46□□□□□ -0.25
PDLIM2-212ENST00000443561 C10orf120Q5SQS8 335 aa13.46□□□□□ -0.25
PDLIM2-212ENST00000443561 SYPL2Q5VXT5 272 aa13.46□□□□□ -0.25
PDLIM2-212ENST00000443561 TPRG1Q6ZUI0 275 aa13.46□□□□□ -0.25
PDLIM2-212ENST00000443561 BBS7Q8IWZ6 715 aa13.46□□□□□ -0.25
PDLIM2-212ENST00000443561 SIX6OS1Q8N1H7 587 aa13.46□□□□□ -0.25
PDLIM2-212ENST00000443561 IRGQQ8WZA9 623 aa13.46□□□□□ -0.25
PDLIM2-212ENST00000443561 PCMTD1Q96MG8 357 aaPredicted RBP13.46□□□□□ -0.25
PDLIM2-212ENST00000443561 SPAG5Q96R06 1193 aa13.46□□□□□ -0.25
PDLIM2-212ENST00000443561 FBRSL1Q9HCM7 1045 aaKnown RBP13.46□□□□□ -0.25
PDLIM2-212ENST00000443561 SFMBT1Q9UHJ3 866 aa13.46□□□□□ -0.25
PDLIM2-212ENST00000443561 GOLGA6L19H0YKK7 550 aa13.45□□□□□ -0.26
PDLIM2-212ENST00000443561 GFRA2O00451 464 aa13.45□□□□□ -0.26
PDLIM2-212ENST00000443561 IGLV3-25P01717 112 aa13.45□□□□□ -0.26
PDLIM2-212ENST00000443561 IGLV3-27P01718 113 aa13.45□□□□□ -0.26
PDLIM2-212ENST00000443561 UNGP13051 313 aaPredicted RBP13.45□□□□□ -0.26
PDLIM2-212ENST00000443561 TFE3P19532 575 aaPredicted RBP13.45□□□□□ -0.26
PDLIM2-212ENST00000443561 CTHP32929 405 aa13.45□□□□□ -0.26
PDLIM2-212ENST00000443561 ATP5C1P36542 298 aaKnown RBP13.45□□□□□ -0.26
PDLIM2-212ENST00000443561 GABRB2P47870 512 aa13.45□□□□□ -0.26
PDLIM2-212ENST00000443561 PSEN1P49768 467 aa13.45□□□□□ -0.26
PDLIM2-212ENST00000443561 SLC8A3P57103 927 aa13.45□□□□□ -0.26
PDLIM2-212ENST00000443561 BPIFB4P59827 614 aa13.45□□□□□ -0.26
PDLIM2-212ENST00000443561 FIGNQ5HY92 759 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 159.4 ms