RNA–Protein interactions for RNA: ENST00000443016.1

USP6NL-203, Transcript of USP6 N-terminal like, humanhuman

TSL 2

Gene USP6NL, Length 2,491 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-203ENST00000443016 NAIF1Q69YI7 327 aaPredicted RBP9.25□□□□□ -0.93
USP6NL-203ENST00000443016 FOXR2Q6PJQ5 311 aa9.25□□□□□ -0.93
USP6NL-203ENST00000443016 CEP68Q76N32 757 aa9.25□□□□□ -0.93
USP6NL-203ENST00000443016 LONP2Q86WA8 852 aa9.25□□□□□ -0.93
USP6NL-203ENST00000443016 AOPEPQ8N6M6 819 aa9.25□□□□□ -0.93
USP6NL-203ENST00000443016 APOBEC3GQ9HC16 384 aaKnown RBP9.25□□□□□ -0.93
USP6NL-203ENST00000443016 METTL14Q9HCE5 456 aaKnown RBP9.25□□□□□ -0.93
USP6NL-203ENST00000443016 C2orf42Q9NWW7 574 aa9.25□□□□□ -0.93
USP6NL-203ENST00000443016 RAB20Q9NX57 234 aa9.25□□□□□ -0.93
USP6NL-203ENST00000443016 DENND4CQ5VZ89 1909 aa9.25□□□□□ -0.93
USP6NL-203ENST00000443016 ATG2BQ96BY7 2078 aa9.25□□□□□ -0.93
USP6NL-203ENST00000443016 TNFRSF10BO14763 440 aa9.24□□□□□ -0.93
USP6NL-203ENST00000443016 COCHO43405 550 aa9.24□□□□□ -0.93
USP6NL-203ENST00000443016 BEST1O76090 585 aa9.24□□□□□ -0.93
USP6NL-203ENST00000443016 TDGF1P13385 188 aa9.24□□□□□ -0.93
USP6NL-203ENST00000443016 ACO1P21399 889 aaKnown RBP9.24□□□□□ -0.93
USP6NL-203ENST00000443016 PXNP49023 591 aaPredicted RBP9.24□□□□□ -0.93
USP6NL-203ENST00000443016 ENPEPQ07075 957 aa9.24□□□□□ -0.93
USP6NL-203ENST00000443016 INCA1Q0VD86 236 aa9.24□□□□□ -0.93
USP6NL-203ENST00000443016 CCDC26Q8TAB7 109 aa9.24□□□□□ -0.93
USP6NL-203ENST00000443016 HEXIM2Q96MH2 286 aaKnown RBP9.24□□□□□ -0.93
USP6NL-203ENST00000443016 TWNKQ96RR1 684 aa9.24□□□□□ -0.93
USP6NL-203ENST00000443016 SMOQ99835 787 aa9.24□□□□□ -0.93
USP6NL-203ENST00000443016 CCSER2Q9H7U1 834 aa9.24□□□□□ -0.93
USP6NL-203ENST00000443016 CBX8Q9HC52 389 aa9.24□□□□□ -0.93
USP6NL-203ENST00000443016 TLR8Q9NR97 1041 aaKnown RBP9.24□□□□□ -0.93
USP6NL-203ENST00000443016 GMIPQ9P107 970 aa9.24□□□□□ -0.93
USP6NL-203ENST00000443016 SH3BP1Q9Y3L3 701 aa9.24□□□□□ -0.93
USP6NL-203ENST00000443016 CACNA1AO00555 2505 aa9.24□□□□□ -0.93
USP6NL-203ENST00000443016 FANCMQ8IYD8 2048 aa9.24□□□□□ -0.93
USP6NL-203ENST00000443016 OBSL1O75147 1896 aa9.24□□□□□ -0.93
USP6NL-203ENST00000443016 K7ESF4 209 aa9.24□□□□□ -0.93
USP6NL-203ENST00000443016 CILPO75339 1184 aa9.24□□□□□ -0.93
USP6NL-203ENST00000443016 PAPSS2O95340 614 aaPredicted RBP9.24□□□□□ -0.93
USP6NL-203ENST00000443016 OLFM2O95897 454 aa9.24□□□□□ -0.93
USP6NL-203ENST00000443016 CD44P16070 742 aaKnown RBP9.24□□□□□ -0.93
USP6NL-203ENST00000443016 CNR2P34972 360 aa9.24□□□□□ -0.93
USP6NL-203ENST00000443016 DMWDQ09019 674 aa9.24□□□□□ -0.93
USP6NL-203ENST00000443016 PKN3Q6P5Z2 889 aa9.24□□□□□ -0.93
USP6NL-203ENST00000443016 ARHGAP30Q7Z6I6 1101 aaPredicted RBP9.24□□□□□ -0.93
USP6NL-203ENST00000443016 ADGRG2Q8IZP9 1017 aa9.24□□□□□ -0.93
USP6NL-203ENST00000443016 TTC39CQ8N584 583 aa9.24□□□□□ -0.93
USP6NL-203ENST00000443016 RNF214Q8ND24 703 aa9.24□□□□□ -0.93
USP6NL-203ENST00000443016 ANKRD20A12PQ8NF67 263 aa9.24□□□□□ -0.93
USP6NL-203ENST00000443016 RPLP0P6Q8NHW5 317 aa9.24□□□□□ -0.93
USP6NL-203ENST00000443016 ENOX1Q8TC92 643 aaKnown RBP9.24□□□□□ -0.93
USP6NL-203ENST00000443016 HNRNPABQ99729 332 aaKnown RBP9.24□□□□□ -0.93
USP6NL-203ENST00000443016 COMMD8Q9NX08 183 aa9.24□□□□□ -0.93
USP6NL-203ENST00000443016 TBC1D14Q9P2M4 693 aa9.24□□□□□ -0.93
USP6NL-203ENST00000443016 ARMCX3Q9UH62 379 aaPredicted RBP9.24□□□□□ -0.93
USP6NL-203ENST00000443016 USP18Q9UMW8 372 aa9.24□□□□□ -0.93
USP6NL-203ENST00000443016 NCOR2Q9Y618 2525 aa9.23□□□□□ -0.93
USP6NL-203ENST00000443016 SLC16A3O15427 465 aaKnown RBP9.23□□□□□ -0.93
USP6NL-203ENST00000443016 TLR5O60602 858 aa9.23□□□□□ -0.93
USP6NL-203ENST00000443016 ADH1CP00326 375 aa9.23□□□□□ -0.93
USP6NL-203ENST00000443016 IRF1P10914 325 aa9.23□□□□□ -0.93
USP6NL-203ENST00000443016 SLC8A3P57103 927 aa9.23□□□□□ -0.93
USP6NL-203ENST00000443016 SRSF5Q13243 272 aaKnown RBP9.23□□□□□ -0.93
USP6NL-203ENST00000443016 PDAP1Q13442 181 aaKnown RBP9.23□□□□□ -0.93
USP6NL-203ENST00000443016 C2orf27AQ580R0 203 aa9.23□□□□□ -0.93
USP6NL-203ENST00000443016 ANKRD40Q6AI12 368 aa9.23□□□□□ -0.93
USP6NL-203ENST00000443016 CLEC20AQ6ZU45 233 aa9.23□□□□□ -0.93
USP6NL-203ENST00000443016 FAM114A1Q8IWE2 563 aa9.23□□□□□ -0.93
USP6NL-203ENST00000443016 GPR161Q8N6U8 529 aaKnown RBP9.23□□□□□ -0.93
USP6NL-203ENST00000443016 ZMIZ2Q8NF64 920 aa9.23□□□□□ -0.93
USP6NL-203ENST00000443016 CSNK1G1Q9HCP0 422 aa9.23□□□□□ -0.93
USP6NL-203ENST00000443016 CISHQ9NSE2 258 aa9.23□□□□□ -0.93
USP6NL-203ENST00000443016 KIF26AQ9ULI4 1882 aaPredicted RBP9.23□□□□□ -0.93
USP6NL-203ENST00000443016 PTPRDP23468 1912 aa9.23□□□□□ -0.93
USP6NL-203ENST00000443016 LAMA1P25391 3075 aa9.23□□□□□ -0.93
USP6NL-203ENST00000443016 TRIM49BA6NDI0 452 aa9.23□□□□□ -0.93
USP6NL-203ENST00000443016 HRO43593 1189 aa9.23□□□□□ -0.93
USP6NL-203ENST00000443016 CYP17A1P05093 508 aa9.23□□□□□ -0.93
USP6NL-203ENST00000443016 TUBP50607 506 aa9.23□□□□□ -0.93
USP6NL-203ENST00000443016 SEC13P55735 322 aa9.23□□□□□ -0.93
USP6NL-203ENST00000443016 STX17P56962 302 aa9.23□□□□□ -0.93
USP6NL-203ENST00000443016 GOLGA8FQ08AF8 430 aa9.23□□□□□ -0.93
USP6NL-203ENST00000443016 GOLGA8DPQ0D2H9 430 aa9.23□□□□□ -0.93
USP6NL-203ENST00000443016 DHCR24Q15392 516 aa9.23□□□□□ -0.93
USP6NL-203ENST00000443016 BTBD8Q5XKL5 378 aa9.23□□□□□ -0.93
USP6NL-203ENST00000443016 LUZP1Q86V48 1076 aa9.23□□□□□ -0.93
USP6NL-203ENST00000443016 SEMA4DQ92854 862 aa9.23□□□□□ -0.93
USP6NL-203ENST00000443016 ACDQ96AP0 544 aa9.23□□□□□ -0.93
USP6NL-203ENST00000443016 NFE2L3Q9Y4A8 694 aa9.23□□□□□ -0.93
USP6NL-203ENST00000443016 GREB1Q4ZG55 1949 aa9.23□□□□□ -0.93
USP6NL-203ENST00000443016 ANAPC1Q9H1A4 1944 aa9.23□□□□□ -0.93
USP6NL-203ENST00000443016 MYH10P35580 1976 aa9.22□□□□□ -0.93
USP6NL-203ENST00000443016 E2F8A0AVK6 867 aa9.22□□□□□ -0.93
USP6NL-203ENST00000443016 FAM92AA1XBS5 289 aa9.22□□□□□ -0.93
USP6NL-203ENST00000443016 SH3BP5O60239 455 aa9.22□□□□□ -0.93
USP6NL-203ENST00000443016 HOXC13P31276 330 aa9.22□□□□□ -0.93
USP6NL-203ENST00000443016 ATP5C1P36542 298 aaKnown RBP9.22□□□□□ -0.93
USP6NL-203ENST00000443016 PMS1P54277 932 aaKnown RBP9.22□□□□□ -0.93
USP6NL-203ENST00000443016 CCDC40Q4G0X9 1142 aa9.22□□□□□ -0.93
USP6NL-203ENST00000443016 PPP1R26Q5T8A7 1209 aaPredicted RBP9.22□□□□□ -0.93
USP6NL-203ENST00000443016 SNX30Q5VWJ9 437 aa9.22□□□□□ -0.93
USP6NL-203ENST00000443016 LAIR1Q6GTX8 287 aa9.22□□□□□ -0.93
USP6NL-203ENST00000443016 CAMKK1Q8N5S9 505 aa9.22□□□□□ -0.93
USP6NL-203ENST00000443016 KIAA1958Q8N8K9 716 aa9.22□□□□□ -0.93
USP6NL-203ENST00000443016 HHIPQ96QV1 700 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms