RNA–Protein interactions for RNA: ENST00000442234.5

LIG4-203, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIG4, Length 3,982 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-203ENST00000442234 ACSBG2Q5FVE4 666 aa2.88□□□□□ -1.95
LIG4-203ENST00000442234 EPHA10Q5JZY3 1008 aa2.88□□□□□ -1.95
LIG4-203ENST00000442234 DACT2Q5SW24 774 aa2.88□□□□□ -1.95
LIG4-203ENST00000442234 STRIP1Q5VSL9 837 aa2.88□□□□□ -1.95
LIG4-203ENST00000442234 DCDC5Q6ZRR9 648 aa2.88□□□□□ -1.95
LIG4-203ENST00000442234 CYP2U1Q7Z449 544 aa2.88□□□□□ -1.95
LIG4-203ENST00000442234 RALGPS2Q86X27 583 aaPredicted RBP2.88□□□□□ -1.95
LIG4-203ENST00000442234 SRRM1Q8IYB3 904 aaKnown RBP2.88□□□□□ -1.95
LIG4-203ENST00000442234 ELMOD1Q8N336 334 aa2.88□□□□□ -1.95
LIG4-203ENST00000442234 C12orf50Q8NA57 414 aaPredicted RBP2.88□□□□□ -1.95
LIG4-203ENST00000442234 AGBL3Q8NEM8 1001 aa2.88□□□□□ -1.95
LIG4-203ENST00000442234 PPP4R1Q8TF05 950 aa2.88□□□□□ -1.95
LIG4-203ENST00000442234 SDR42E1Q8WUS8 393 aa2.88□□□□□ -1.95
LIG4-203ENST00000442234 ATXN2LQ8WWM7 1075 aaKnown RBP2.88□□□□□ -1.95
LIG4-203ENST00000442234 CDKL2Q92772 493 aa2.88□□□□□ -1.95
LIG4-203ENST00000442234 MTBPQ96DY7 904 aa2.88□□□□□ -1.95
LIG4-203ENST00000442234 MCRS1Q96EZ8 462 aa2.88□□□□□ -1.95
LIG4-203ENST00000442234 DYNLL2Q96FJ2 89 aa2.88□□□□□ -1.95
LIG4-203ENST00000442234 PLEKHA8Q96JA3 519 aa2.88□□□□□ -1.95
LIG4-203ENST00000442234 DHRS9Q9BPW9 319 aa2.88□□□□□ -1.95
LIG4-203ENST00000442234 HEMGNQ9BXL5 484 aa2.88□□□□□ -1.95
LIG4-203ENST00000442234 RHOBTB2Q9BYZ6 727 aa2.88□□□□□ -1.95
LIG4-203ENST00000442234 FAM49AQ9H0Q0 323 aaPredicted RBP2.88□□□□□ -1.95
LIG4-203ENST00000442234 DDX47Q9H0S4 455 aaKnown RBP2.88□□□□□ -1.95
LIG4-203ENST00000442234 RNF41Q9H4P4 317 aaPredicted RBP2.88□□□□□ -1.95
LIG4-203ENST00000442234 MOV10Q9HCE1 1003 aaKnown RBP2.88□□□□□ -1.95
LIG4-203ENST00000442234 BRD7Q9NPI1 651 aa2.88□□□□□ -1.95
LIG4-203ENST00000442234 XPNPEP3Q9NQH7 507 aa2.88□□□□□ -1.95
LIG4-203ENST00000442234 ARMC1Q9NVT9 282 aa2.88□□□□□ -1.95
LIG4-203ENST00000442234 ADD3Q9UEY8 706 aaKnown RBP2.88□□□□□ -1.95
LIG4-203ENST00000442234 CPSF3Q9UKF6 684 aaKnown RBP2.88□□□□□ -1.95
LIG4-203ENST00000442234 POU2F3Q9UKI9 436 aa2.88□□□□□ -1.95
LIG4-203ENST00000442234 DNM3Q9UQ16 869 aa2.88□□□□□ -1.95
LIG4-203ENST00000442234 SLC30A1Q9Y6M5 507 aa2.88□□□□□ -1.95
LIG4-203ENST00000442234 CAPN6Q9Y6Q1 641 aa2.88□□□□□ -1.95
LIG4-203ENST00000442234 PDS5AQ29RF7 1337 aaKnown RBP2.88□□□□□ -1.95
LIG4-203ENST00000442234 MROH7Q68CQ1 1323 aa2.88□□□□□ -1.95
LIG4-203ENST00000442234 RTL9Q8NET4 1388 aa2.88□□□□□ -1.95
LIG4-203ENST00000442234 PARP4Q9UKK3 1724 aaKnown RBP2.88□□□□□ -1.95
LIG4-203ENST00000442234 MTORP42345 2549 aa2.87□□□□□ -1.95
LIG4-203ENST00000442234 TTC26A0AVF1 554 aa2.87□□□□□ -1.95
LIG4-203ENST00000442234 LRRC72A6NJI9 287 aa2.87□□□□□ -1.95
LIG4-203ENST00000442234 KCNJ18B7U540 433 aa2.87□□□□□ -1.95
LIG4-203ENST00000442234 DDX3XO00571 662 aaKnown RBP eCLIP2.87□□□□□ -1.95
LIG4-203ENST00000442234 MTSS1O43312 755 aa2.87□□□□□ -1.95
LIG4-203ENST00000442234 AQP9O43315 295 aa2.87□□□□□ -1.95
LIG4-203ENST00000442234 PRPF3O43395 683 aaKnown RBP2.87□□□□□ -1.95
LIG4-203ENST00000442234 FDX1P10109 184 aa2.87□□□□□ -1.95
LIG4-203ENST00000442234 MCF2P10911 925 aa2.87□□□□□ -1.95
LIG4-203ENST00000442234 CCNB1P14635 433 aa2.87□□□□□ -1.95
LIG4-203ENST00000442234 UQCRBP14927 111 aa2.87□□□□□ -1.95
LIG4-203ENST00000442234 ANPEPP15144 967 aa2.87□□□□□ -1.95
LIG4-203ENST00000442234 GM2AP17900 193 aa2.87□□□□□ -1.95
LIG4-203ENST00000442234 ITGALP20701 1170 aa2.87□□□□□ -1.95
LIG4-203ENST00000442234 PMLP29590 882 aa2.87□□□□□ -1.95
LIG4-203ENST00000442234 GTF2H1P32780 548 aa2.87□□□□□ -1.95
LIG4-203ENST00000442234 ADD2P35612 726 aa2.87□□□□□ -1.95
LIG4-203ENST00000442234 NKX2-5P52952 324 aaPredicted RBP2.87□□□□□ -1.95
LIG4-203ENST00000442234 PTPN5P54829 565 aa2.87□□□□□ -1.95
LIG4-203ENST00000442234 NR1H2P55055 460 aa2.87□□□□□ -1.95
LIG4-203ENST00000442234 VCPP55072 806 aaKnown RBP2.87□□□□□ -1.95
LIG4-203ENST00000442234 HAND2P61296 217 aa2.87□□□□□ -1.95
LIG4-203ENST00000442234 COPZ1P61923 177 aa2.87□□□□□ -1.95
LIG4-203ENST00000442234 HERVK_113P62684 666 aa2.87□□□□□ -1.95
LIG4-203ENST00000442234 KDSRQ06136 332 aa2.87□□□□□ -1.95
LIG4-203ENST00000442234 FUT2Q10981 343 aa2.87□□□□□ -1.95
LIG4-203ENST00000442234 DPYSQ14117 519 aa2.87□□□□□ -1.95
LIG4-203ENST00000442234 KCNJ12Q14500 433 aa2.87□□□□□ -1.95
LIG4-203ENST00000442234 ACAP2Q15057 778 aa2.87□□□□□ -1.95
LIG4-203ENST00000442234 CARTPTQ16568 116 aa2.87□□□□□ -1.95
LIG4-203ENST00000442234 NFE2Q16621 373 aaPredicted RBP2.87□□□□□ -1.95
LIG4-203ENST00000442234 LRRC26Q2I0M4 334 aa2.87□□□□□ -1.95
LIG4-203ENST00000442234 CDONQ4KMG0 1287 aa2.87□□□□□ -1.95
LIG4-203ENST00000442234 TAF1BQ53T94 588 aaPredicted RBP2.87□□□□□ -1.95
LIG4-203ENST00000442234 ZNF618Q5T7W0 954 aa2.87□□□□□ -1.95
LIG4-203ENST00000442234 RFWD3Q6PCD5 774 aa2.87□□□□□ -1.95
LIG4-203ENST00000442234 CCBE1Q6UXH8 406 aaPredicted RBP2.87□□□□□ -1.95
LIG4-203ENST00000442234 ASRGL1Q7L266 308 aa2.87□□□□□ -1.95
LIG4-203ENST00000442234 SLC51BQ86UW2 128 aa2.87□□□□□ -1.95
LIG4-203ENST00000442234 STK32CQ86UX6 486 aa2.87□□□□□ -1.95
LIG4-203ENST00000442234 CDR2LQ86X02 465 aaPredicted RBP2.87□□□□□ -1.95
LIG4-203ENST00000442234 LRRC6Q86X45 466 aa2.87□□□□□ -1.95
LIG4-203ENST00000442234 ERI1Q8IV48 349 aaKnown RBP2.87□□□□□ -1.95
LIG4-203ENST00000442234 NELFCDQ8IXH7 590 aa2.87□□□□□ -1.95
LIG4-203ENST00000442234 SRBD1Q8N5C6 995 aaKnown RBP2.87□□□□□ -1.95
LIG4-203ENST00000442234 LZTR1Q8N653 840 aa2.87□□□□□ -1.95
LIG4-203ENST00000442234 PSD4Q8NDX1 1056 aa2.87□□□□□ -1.95
LIG4-203ENST00000442234 GPRC5AQ8NFJ5 357 aa2.87□□□□□ -1.95
LIG4-203ENST00000442234 ACER1Q8TDN7 264 aa2.87□□□□□ -1.95
LIG4-203ENST00000442234 C7orf43Q8WVR3 580 aa2.87□□□□□ -1.95
LIG4-203ENST00000442234 WASF1Q92558 559 aa2.87□□□□□ -1.95
LIG4-203ENST00000442234 PAGE5Q96GU1 130 aa2.87□□□□□ -1.95
LIG4-203ENST00000442234 OLFM1Q99784 485 aa2.87□□□□□ -1.95
LIG4-203ENST00000442234 CTRCQ99895 268 aa2.87□□□□□ -1.95
LIG4-203ENST00000442234 AP1M1Q9BXS5 423 aa2.87□□□□□ -1.95
LIG4-203ENST00000442234 MRPS26Q9BYN8 205 aaKnown RBP2.87□□□□□ -1.95
LIG4-203ENST00000442234 UNKQ9C0B0 810 aaKnown RBP2.87□□□□□ -1.95
LIG4-203ENST00000442234 FANCEQ9HB96 536 aa2.87□□□□□ -1.95
LIG4-203ENST00000442234 EPB41L4AQ9HCS5 686 aaPredicted RBP2.87□□□□□ -1.95
LIG4-203ENST00000442234 FAM8A1Q9UBU6 413 aa2.87□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms