RNA–Protein interactions for RNA: ENST00000442232.1

TTC28-203, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 2

Gene TTC28, Length 499 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-203ENST00000442232 PNPLA8Q9NP80 782 aa12.43□□□□□ -0.42
TTC28-203ENST00000442232 SPHK2Q9NRA0 654 aa12.43□□□□□ -0.42
TTC28-203ENST00000442232 SCML2Q9UQR0 700 aa12.43□□□□□ -0.42
TTC28-203ENST00000442232 INVSQ9Y283 1065 aa12.43□□□□□ -0.42
TTC28-203ENST00000442232 PLXND1Q9Y4D7 1925 aa12.43□□□□□ -0.42
TTC28-203ENST00000442232 BCLAF3A2AJT9 711 aaKnown RBP12.42□□□□□ -0.42
TTC28-203ENST00000442232 CETN3O15182 167 aa12.42□□□□□ -0.42
TTC28-203ENST00000442232 CYP26A1O43174 497 aa12.42□□□□□ -0.42
TTC28-203ENST00000442232 CILPO75339 1184 aa12.42□□□□□ -0.42
TTC28-203ENST00000442232 BEST1O76090 585 aa12.42□□□□□ -0.42
TTC28-203ENST00000442232 ADRB1P08588 477 aa12.42□□□□□ -0.42
TTC28-203ENST00000442232 GTF2H1P32780 548 aa12.42□□□□□ -0.42
TTC28-203ENST00000442232 DHPSP49366 369 aaPredicted RBP12.42□□□□□ -0.42
TTC28-203ENST00000442232 PSEN1P49768 467 aa12.42□□□□□ -0.42
TTC28-203ENST00000442232 SLC8A3P57103 927 aa12.42□□□□□ -0.42
TTC28-203ENST00000442232 EDRF1Q3B7T1 1238 aa12.42□□□□□ -0.42
TTC28-203ENST00000442232 C10orf120Q5SQS8 335 aa12.42□□□□□ -0.42
TTC28-203ENST00000442232 C10orf76Q5T2E6 689 aa12.42□□□□□ -0.42
TTC28-203ENST00000442232 PMS2CLQ68D20 193 aa12.42□□□□□ -0.42
TTC28-203ENST00000442232 GRAMD4Q6IC98 578 aa12.42□□□□□ -0.42
TTC28-203ENST00000442232 SDE2Q6IQ49 451 aa12.42□□□□□ -0.42
TTC28-203ENST00000442232 CLEC20AQ6ZU45 233 aa12.42□□□□□ -0.42
TTC28-203ENST00000442232 RASSF3Q86WH2 238 aa12.42□□□□□ -0.42
TTC28-203ENST00000442232 ZNF513Q8N8E2 541 aaPredicted RBP12.42□□□□□ -0.42
TTC28-203ENST00000442232 NAT16Q8N8M0 369 aa12.42□□□□□ -0.42
TTC28-203ENST00000442232 IL17RCQ8NAC3 791 aa12.42□□□□□ -0.42
TTC28-203ENST00000442232 MDGA1Q8NFP4 955 aa12.42□□□□□ -0.42
TTC28-203ENST00000442232 HMGB4Q8WW32 186 aa12.42□□□□□ -0.42
TTC28-203ENST00000442232 EDEM2Q9BV94 578 aa12.42□□□□□ -0.42
TTC28-203ENST00000442232 SMOC1Q9H4F8 434 aa12.42□□□□□ -0.42
TTC28-203ENST00000442232 DNAJC17Q9NVM6 304 aaKnown RBP12.42□□□□□ -0.42
TTC28-203ENST00000442232 WDR35Q9P2L0 1181 aa12.42□□□□□ -0.42
TTC28-203ENST00000442232 NAGPAQ9UK23 515 aa12.42□□□□□ -0.42
TTC28-203ENST00000442232 MYO18AQ92614 2054 aaKnown RBP12.42□□□□□ -0.42
TTC28-203ENST00000442232 ABCA7Q8IZY2 2146 aa12.41□□□□□ -0.42
TTC28-203ENST00000442232 TCRBV21S2A2A0A5A6 115 aa12.41□□□□□ -0.42
TTC28-203ENST00000442232 NEDD8-MDP1E9PL57 170 aa12.41□□□□□ -0.42
TTC28-203ENST00000442232 SGK1O00141 431 aa12.41□□□□□ -0.42
TTC28-203ENST00000442232 TULP3O75386 442 aa12.41□□□□□ -0.42
TTC28-203ENST00000442232 RALAP11233 206 aa12.41□□□□□ -0.42
TTC28-203ENST00000442232 RARGP13631 454 aa12.41□□□□□ -0.42
TTC28-203ENST00000442232 PPP3CAQ08209 521 aa12.41□□□□□ -0.42
TTC28-203ENST00000442232 C1orf220Q5T0J3 134 aa12.41□□□□□ -0.42
TTC28-203ENST00000442232 TCERG1LQ5VWI1 586 aa12.41□□□□□ -0.42
TTC28-203ENST00000442232 HTR3DQ70Z44 454 aa12.41□□□□□ -0.42
TTC28-203ENST00000442232 LPCAT2Q7L5N7 544 aa12.41□□□□□ -0.42
TTC28-203ENST00000442232 TERB1Q8NA31 727 aa12.41□□□□□ -0.42
TTC28-203ENST00000442232 FBXL13Q8NEE6 735 aa12.41□□□□□ -0.42
TTC28-203ENST00000442232 KCNV2Q8TDN2 545 aa12.41□□□□□ -0.42
TTC28-203ENST00000442232 FAXDC2Q96IV6 333 aa12.41□□□□□ -0.42
TTC28-203ENST00000442232 CHAMP1Q96JM3 812 aa12.41□□□□□ -0.42
TTC28-203ENST00000442232 HEXIM2Q96MH2 286 aaKnown RBP12.41□□□□□ -0.42
TTC28-203ENST00000442232 TWNKQ96RR1 684 aa12.41□□□□□ -0.42
TTC28-203ENST00000442232 BBS2Q9BXC9 721 aa12.41□□□□□ -0.42
TTC28-203ENST00000442232 GOLPH3LQ9H4A5 285 aa12.41□□□□□ -0.42
TTC28-203ENST00000442232 APOBEC3GQ9HC16 384 aaKnown RBP12.41□□□□□ -0.42
TTC28-203ENST00000442232 CYLDQ9NQC7 956 aa12.41□□□□□ -0.42
TTC28-203ENST00000442232 HOOK1Q9UJC3 728 aaKnown RBP12.41□□□□□ -0.42
TTC28-203ENST00000442232 DNMT3LQ9UJW3 386 aa12.41□□□□□ -0.42
TTC28-203ENST00000442232 ZDHHC9Q9Y397 364 aa12.41□□□□□ -0.42
TTC28-203ENST00000442232 CNOT1A5YKK6 2376 aaKnown RBP12.4□□□□□ -0.42
TTC28-203ENST00000442232 A0A0A0MRY4 1105 aa12.4□□□□□ -0.42
TTC28-203ENST00000442232 A0A1W2PQH9 124 aa12.4□□□□□ -0.42
TTC28-203ENST00000442232 KHNYNO15037 678 aaKnown RBP12.4□□□□□ -0.42
TTC28-203ENST00000442232 SMC2O95347 1197 aa12.4□□□□□ -0.42
TTC28-203ENST00000442232 TBX18O95935 607 aa12.4□□□□□ -0.42
TTC28-203ENST00000442232 HOXB2P14652 356 aa12.4□□□□□ -0.42
TTC28-203ENST00000442232 DPP6P42658 865 aa12.4□□□□□ -0.42
TTC28-203ENST00000442232 KIR2DL1P43626 348 aaPredicted RBP12.4□□□□□ -0.42
TTC28-203ENST00000442232 PLA2G4AP47712 749 aa12.4□□□□□ -0.42
TTC28-203ENST00000442232 YWHAEP62258 255 aaKnown RBP12.4□□□□□ -0.42
TTC28-203ENST00000442232 BECN1Q14457 450 aa12.4□□□□□ -0.42
TTC28-203ENST00000442232 ZNF394Q53GI3 561 aa12.4□□□□□ -0.42
TTC28-203ENST00000442232 DCAF17Q5H9S7 520 aaPredicted RBP12.4□□□□□ -0.42
TTC28-203ENST00000442232 DAB2IPQ5VWQ8 1189 aa12.4□□□□□ -0.42
TTC28-203ENST00000442232 TCEAL6Q6IPX3 200 aa12.4□□□□□ -0.42
TTC28-203ENST00000442232 KLHDC10Q6PID8 442 aa12.4□□□□□ -0.42
TTC28-203ENST00000442232 TMEM92Q6UXU6 159 aa12.4□□□□□ -0.42
TTC28-203ENST00000442232 TPGS1Q6ZTW0 290 aa12.4□□□□□ -0.42
TTC28-203ENST00000442232 GPRIN1Q7Z2K8 1008 aa12.4□□□□□ -0.42
TTC28-203ENST00000442232 TMEM25Q86YD3 366 aa12.4□□□□□ -0.42
TTC28-203ENST00000442232 ETFBKMTQ8IXQ9 262 aa12.4□□□□□ -0.42
TTC28-203ENST00000442232 ARHGAP18Q8N392 663 aa12.4□□□□□ -0.42
TTC28-203ENST00000442232 TCEAL3Q969E4 200 aa12.4□□□□□ -0.42
TTC28-203ENST00000442232 KLF16Q9BXK1 252 aaPredicted RBP12.4□□□□□ -0.42
TTC28-203ENST00000442232 DUSP16Q9BY84 665 aa12.4□□□□□ -0.42
TTC28-203ENST00000442232 GTPBP4Q9BZE4 634 aaKnown RBP12.4□□□□□ -0.42
TTC28-203ENST00000442232 FAM124BQ9H5Z6 455 aaPredicted RBP12.4□□□□□ -0.42
TTC28-203ENST00000442232 GDPD2Q9HCC8 539 aa12.4□□□□□ -0.42
TTC28-203ENST00000442232 ZNF510Q9Y2H8 683 aa12.4□□□□□ -0.42
TTC28-203ENST00000442232 CEP192Q8TEP8 1941 aa12.4□□□□□ -0.42
TTC28-203ENST00000442232 SLC16A3O15427 465 aaKnown RBP12.39□□□□□ -0.43
TTC28-203ENST00000442232 TYRP14679 529 aa12.39□□□□□ -0.43
TTC28-203ENST00000442232 BCKDHBP21953 392 aa12.39□□□□□ -0.43
TTC28-203ENST00000442232 NTSR1P30989 418 aa12.39□□□□□ -0.43
TTC28-203ENST00000442232 P2RY2P41231 377 aa12.39□□□□□ -0.43
TTC28-203ENST00000442232 PNOCQ13519 176 aa12.39□□□□□ -0.43
TTC28-203ENST00000442232 STIM1Q13586 685 aa12.39□□□□□ -0.43
TTC28-203ENST00000442232 ZCWPW2Q504Y3 356 aa12.39□□□□□ -0.43
TTC28-203ENST00000442232 PPP1R26Q5T8A7 1209 aaPredicted RBP12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms