RNA–Protein interactions for RNA: ENST00000441915.5

SEMA3B-207, Transcript of semaphorin 3B, humanhuman

TSL 1 (best)

Gene SEMA3B, Length 2,710 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-207ENST00000441915 APBB1IPQ7Z5R6 666 aaPredicted RBP17.14■□□□□ 0.33
SEMA3B-207ENST00000441915 TRIM42Q8IWZ5 723 aa17.14■□□□□ 0.33
SEMA3B-207ENST00000441915 CXorf38Q8TB03 319 aa17.14■□□□□ 0.33
SEMA3B-207ENST00000441915 RTP4Q96DX8 246 aa17.14■□□□□ 0.33
SEMA3B-207ENST00000441915 SPDL1Q96EA4 605 aa17.14■□□□□ 0.33
SEMA3B-207ENST00000441915 ASB7Q9H672 318 aa17.14■□□□□ 0.33
SEMA3B-207ENST00000441915 SDAD1Q9NVU7 687 aaKnown RBP eCLIP17.14■□□□□ 0.338e-6■■■□□ 14.7
SEMA3B-207ENST00000441915 GGA3Q9NZ52 723 aa17.14■□□□□ 0.33
SEMA3B-207ENST00000441915 TSPAN16Q9UKR8 245 aa17.14■□□□□ 0.33
SEMA3B-207ENST00000441915 KAT6AQ92794 2004 aa17.14■□□□□ 0.33
SEMA3B-207ENST00000441915 FZD9O00144 591 aa17.14■□□□□ 0.33
SEMA3B-207ENST00000441915 CCDC6Q16204 474 aa17.14■□□□□ 0.33
SEMA3B-207ENST00000441915 FAM182AQ5T1J6 154 aa17.14■□□□□ 0.33
SEMA3B-207ENST00000441915 FAXCQ5TGI0 409 aa17.14■□□□□ 0.33
SEMA3B-207ENST00000441915 AP1ARQ63HQ0 302 aa17.14■□□□□ 0.33
SEMA3B-207ENST00000441915 MAP1SQ66K74 1059 aaPredicted RBP17.14■□□□□ 0.33
SEMA3B-207ENST00000441915 PIWIL1Q96J94 861 aaKnown RBP17.14■□□□□ 0.33
SEMA3B-207ENST00000441915 PLLPQ9Y342 182 aa17.14■□□□□ 0.33
SEMA3B-207ENST00000441915 HBP1O60381 514 aa17.13■□□□□ 0.33
SEMA3B-207ENST00000441915 C1QAP02745 245 aa17.13■□□□□ 0.33
SEMA3B-207ENST00000441915 ATP6V1C1P21283 382 aa17.13■□□□□ 0.33
SEMA3B-207ENST00000441915 IL4RP24394 825 aa17.13■□□□□ 0.33
SEMA3B-207ENST00000441915 NDST1P52848 882 aa17.13■□□□□ 0.33
SEMA3B-207ENST00000441915 APBB2Q92870 758 aa17.13■□□□□ 0.33
SEMA3B-207ENST00000441915 ZBTB10Q96DT7 871 aa17.13■□□□□ 0.33
SEMA3B-207ENST00000441915 PRR11Q96HE9 360 aaPredicted RBP17.13■□□□□ 0.33
SEMA3B-207ENST00000441915 SMARCAD1Q9H4L7 1026 aa17.13■□□□□ 0.33
SEMA3B-207ENST00000441915 POPDC2Q9HBU9 364 aa17.13■□□□□ 0.33
SEMA3B-207ENST00000441915 NGRNQ9NPE2 291 aaKnown RBP17.13■□□□□ 0.33
SEMA3B-207ENST00000441915 ETNK2Q9NVF9 386 aa17.13■□□□□ 0.33
SEMA3B-207ENST00000441915 FAM237BA0A1B0GVD1 139 aa17.13■□□□□ 0.33
SEMA3B-207ENST00000441915 BCLAF3A2AJT9 711 aaKnown RBP17.13■□□□□ 0.33
SEMA3B-207ENST00000441915 MCF2P10911 925 aa17.13■□□□□ 0.33
SEMA3B-207ENST00000441915 PRKCHP24723 683 aa17.13■□□□□ 0.33
SEMA3B-207ENST00000441915 ABL2P42684 1182 aa17.13■□□□□ 0.33
SEMA3B-207ENST00000441915 ATG16L1Q676U5 607 aa17.13■□□□□ 0.33
SEMA3B-207ENST00000441915 CAPRIN2Q6IMN6 1127 aaKnown RBP17.13■□□□□ 0.33
SEMA3B-207ENST00000441915 LCLAT1Q6UWP7 414 aa17.13■□□□□ 0.33
SEMA3B-207ENST00000441915 LMNTD2Q8IXW0 634 aa17.13■□□□□ 0.33
SEMA3B-207ENST00000441915 CFAP61Q8NHU2 1237 aa17.13■□□□□ 0.33
SEMA3B-207ENST00000441915 NFKBIZQ9BYH8 718 aa17.13■□□□□ 0.33
SEMA3B-207ENST00000441915 TAS2R1Q9NYW7 299 aa17.13■□□□□ 0.33
SEMA3B-207ENST00000441915 KIAA1257Q9ULG3 409 aa17.13■□□□□ 0.33
SEMA3B-207ENST00000441915 CORO1CQ9ULV4 474 aaPredicted RBP17.13■□□□□ 0.33
SEMA3B-207ENST00000441915 C2orf71A6NGG8 1288 aa17.12■□□□□ 0.33
SEMA3B-207ENST00000441915 CXorf49A8MYA2 514 aaPredicted RBP17.12■□□□□ 0.33
SEMA3B-207ENST00000441915 FCHO1O14526 889 aa17.12■□□□□ 0.33
SEMA3B-207ENST00000441915 KRT38O76015 456 aa17.12■□□□□ 0.33
SEMA3B-207ENST00000441915 PHKA2P46019 1235 aa17.12■□□□□ 0.33
SEMA3B-207ENST00000441915 TMPRSS15P98073 1019 aa17.12■□□□□ 0.33
SEMA3B-207ENST00000441915 INCA1Q0VD86 236 aa17.12■□□□□ 0.33
SEMA3B-207ENST00000441915 CCDC14Q49A88 953 aa17.12■□□□□ 0.33
SEMA3B-207ENST00000441915 CMPK2Q5EBM0 449 aa17.12■□□□□ 0.33
SEMA3B-207ENST00000441915 CAND1Q86VP6 1230 aaKnown RBP17.12■□□□□ 0.33
SEMA3B-207ENST00000441915 DDX51Q8N8A6 666 aaKnown RBP eCLIP17.12■□□□□ 0.33
SEMA3B-207ENST00000441915 TRPM4Q8TD43 1214 aa17.12■□□□□ 0.33
SEMA3B-207ENST00000441915 DNAJC9Q8WXX5 260 aa17.12■□□□□ 0.33
SEMA3B-207ENST00000441915 LRRC39Q96DD0 335 aa17.12■□□□□ 0.33
SEMA3B-207ENST00000441915 NT5C1AQ9BXI3 368 aa17.12■□□□□ 0.33
SEMA3B-207ENST00000441915 SLC13A1Q9BZW2 595 aa17.12■□□□□ 0.33
SEMA3B-207ENST00000441915 MMADHCQ9H3L0 296 aaPredicted RBP17.12■□□□□ 0.33
SEMA3B-207ENST00000441915 PPP2R3BQ9Y5P8 575 aa17.12■□□□□ 0.33
SEMA3B-207ENST00000441915 EME2A4GXA9 379 aaPredicted RBP17.12■□□□□ 0.33
SEMA3B-207ENST00000441915 CSDE1O75534 798 aaKnown RBP17.12■□□□□ 0.33
SEMA3B-207ENST00000441915 MAP3K6O95382 1288 aa17.12■□□□□ 0.33
SEMA3B-207ENST00000441915 APOEP02649 317 aa17.12■□□□□ 0.33
SEMA3B-207ENST00000441915 DESP17661 470 aa17.12■□□□□ 0.33
SEMA3B-207ENST00000441915 MUM1Q2TAK8 710 aa17.12■□□□□ 0.33
SEMA3B-207ENST00000441915 TTC7BQ86TV6 843 aa17.12■□□□□ 0.33
SEMA3B-207ENST00000441915 PQLC3Q8N755 202 aa17.12■□□□□ 0.33
SEMA3B-207ENST00000441915 E2F7Q96AV8 911 aa17.12■□□□□ 0.33
SEMA3B-207ENST00000441915 C7orf26Q96N11 449 aa17.12■□□□□ 0.33
SEMA3B-207ENST00000441915 NMUR2Q9GZQ4 415 aa17.12■□□□□ 0.33
SEMA3B-207ENST00000441915 IFT122Q9HBG6 1241 aa17.12■□□□□ 0.33
SEMA3B-207ENST00000441915 GPATCH2LQ9NWQ4 482 aa17.12■□□□□ 0.33
SEMA3B-207ENST00000441915 KCNK4Q9NYG8 393 aa17.12■□□□□ 0.33
SEMA3B-207ENST00000441915 WDR90Q96KV7 1748 aa17.12■□□□□ 0.33
SEMA3B-207ENST00000441915 EVPLQ92817 2033 aa17.12■□□□□ 0.33
SEMA3B-207ENST00000441915 PGK2P07205 417 aa17.12■□□□□ 0.33
SEMA3B-207ENST00000441915 SDC4P31431 198 aa17.12■□□□□ 0.33
SEMA3B-207ENST00000441915 VGLL4Q14135 290 aa17.12■□□□□ 0.33
SEMA3B-207ENST00000441915 TMEM132DQ14C87 1099 aa17.12■□□□□ 0.33
SEMA3B-207ENST00000441915 SLC9A4Q6AI14 798 aa17.12■□□□□ 0.33
SEMA3B-207ENST00000441915 RINLQ6ZS11 566 aa17.12■□□□□ 0.33
SEMA3B-207ENST00000441915 ARHGAP24Q8N264 748 aa17.12■□□□□ 0.33
SEMA3B-207ENST00000441915 TTC39CQ8N584 583 aa17.12■□□□□ 0.33
SEMA3B-207ENST00000441915 PCDH19Q8TAB3 1148 aa17.12■□□□□ 0.33
SEMA3B-207ENST00000441915 FAM172AQ8WUF8 416 aa17.12■□□□□ 0.33
SEMA3B-207ENST00000441915 TEKT4Q8WW24 435 aa17.12■□□□□ 0.33
SEMA3B-207ENST00000441915 MTBPQ96DY7 904 aa17.12■□□□□ 0.33
SEMA3B-207ENST00000441915 TBCBQ99426 244 aa17.12■□□□□ 0.33
SEMA3B-207ENST00000441915 MECRQ9BV79 373 aa17.12■□□□□ 0.33
SEMA3B-207ENST00000441915 OSBPL1AQ9BXW6 950 aa17.12■□□□□ 0.33
SEMA3B-207ENST00000441915 GBA2Q9HCG7 927 aaPredicted RBP17.12■□□□□ 0.33
SEMA3B-207ENST00000441915 PCDH18Q9HCL0 1135 aa17.12■□□□□ 0.33
SEMA3B-207ENST00000441915 SLC15A5A6NIM6 579 aa17.11■□□□□ 0.33
SEMA3B-207ENST00000441915 USP2O75604 605 aaPredicted RBP17.11■□□□□ 0.33
SEMA3B-207ENST00000441915 GSTA2P09210 222 aa17.11■□□□□ 0.33
SEMA3B-207ENST00000441915 ACADSP16219 412 aa17.11■□□□□ 0.33
SEMA3B-207ENST00000441915 CYP3A5P20815 502 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms