RNA–Protein interactions for RNA: ENST00000441587.2

ALMS1-IT1-201, ALMS1 intronic transcript 1, humanhuman

TSL 1 (best) BASIC

Gene ALMS1-IT1, Length 2,107 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1-IT1-201ENST00000441587 SLC35A4Q96G79 324 aa6.19□□□□□ -1.42
ALMS1-IT1-201ENST00000441587 MTMR9Q96QG7 549 aa6.19□□□□□ -1.42
ALMS1-IT1-201ENST00000441587 THUMPD2Q9BTF0 503 aaKnown RBP6.19□□□□□ -1.42
ALMS1-IT1-201ENST00000441587 HGH1Q9BTY7 390 aa6.19□□□□□ -1.42
ALMS1-IT1-201ENST00000441587 CNPPD1Q9BV87 410 aa6.19□□□□□ -1.42
ALMS1-IT1-201ENST00000441587 CDADC1Q9BWV3 514 aa6.19□□□□□ -1.42
ALMS1-IT1-201ENST00000441587 B3GNT4Q9C0J1 378 aa6.19□□□□□ -1.42
ALMS1-IT1-201ENST00000441587 C8orf33Q9H7E9 229 aaPredicted RBP6.19□□□□□ -1.42
ALMS1-IT1-201ENST00000441587 PDE11AQ9HCR9 933 aa6.19□□□□□ -1.42
ALMS1-IT1-201ENST00000441587 SEMA3GQ9NS98 782 aa6.19□□□□□ -1.42
ALMS1-IT1-201ENST00000441587 MALT1Q9UDY8 824 aa6.19□□□□□ -1.42
ALMS1-IT1-201ENST00000441587 ADAM21Q9UKJ8 722 aa6.19□□□□□ -1.42
ALMS1-IT1-201ENST00000441587 CLEC4AQ9UMR7 237 aa6.19□□□□□ -1.42
ALMS1-IT1-201ENST00000441587 ZNF281Q9Y2X9 895 aa6.19□□□□□ -1.42
ALMS1-IT1-201ENST00000441587 SESN1Q9Y6P5 492 aa6.19□□□□□ -1.42
ALMS1-IT1-201ENST00000441587 ADAMTS13Q76LX8 1427 aa6.18□□□□□ -1.42
ALMS1-IT1-201ENST00000441587 C3P01024 1663 aa6.18□□□□□ -1.42
ALMS1-IT1-201ENST00000441587 H3BUI4 141 aa6.18□□□□□ -1.42
ALMS1-IT1-201ENST00000441587 TSPAN1O60635 241 aa6.18□□□□□ -1.42
ALMS1-IT1-201ENST00000441587 FMO6PO60774 539 aa6.18□□□□□ -1.42
ALMS1-IT1-201ENST00000441587 KCNJ13O60928 360 aa6.18□□□□□ -1.42
ALMS1-IT1-201ENST00000441587 DLATP10515 647 aaKnown RBP6.18□□□□□ -1.42
ALMS1-IT1-201ENST00000441587 CDH3P22223 829 aa6.18□□□□□ -1.42
ALMS1-IT1-201ENST00000441587 FPR2P25090 351 aa6.18□□□□□ -1.42
ALMS1-IT1-201ENST00000441587 YY1P25490 414 aa6.18□□□□□ -1.42
ALMS1-IT1-201ENST00000441587 PCBP3P57721 371 aaKnown RBP6.18□□□□□ -1.42
ALMS1-IT1-201ENST00000441587 HAND2P61296 217 aa6.18□□□□□ -1.42
ALMS1-IT1-201ENST00000441587 GRSF1Q12849 480 aaKnown RBP eCLIP6.18□□□□□ -1.42
ALMS1-IT1-201ENST00000441587 COASYQ13057 564 aa6.18□□□□□ -1.42
ALMS1-IT1-201ENST00000441587 LRP8Q14114 963 aa6.18□□□□□ -1.42
ALMS1-IT1-201ENST00000441587 FRG1Q14331 258 aaKnown RBP6.18□□□□□ -1.42
ALMS1-IT1-201ENST00000441587 PLS1Q14651 629 aa6.18□□□□□ -1.42
ALMS1-IT1-201ENST00000441587 RRS1Q15050 365 aaKnown RBP6.18□□□□□ -1.42
ALMS1-IT1-201ENST00000441587 TPD52L1Q16890 204 aaPredicted RBP6.18□□□□□ -1.42
ALMS1-IT1-201ENST00000441587 CCDC57Q2TAC2 916 aa6.18□□□□□ -1.42
ALMS1-IT1-201ENST00000441587 ZMYM1Q5SVZ6 1142 aa6.18□□□□□ -1.42
ALMS1-IT1-201ENST00000441587 B3GNT6Q6ZMB0 384 aa6.18□□□□□ -1.42
ALMS1-IT1-201ENST00000441587 OR10H5Q8NGA6 315 aa6.18□□□□□ -1.42
ALMS1-IT1-201ENST00000441587 CEP70Q8NHQ1 597 aa6.18□□□□□ -1.42
ALMS1-IT1-201ENST00000441587 CEP76Q8TAP6 659 aa6.18□□□□□ -1.42
ALMS1-IT1-201ENST00000441587 WHAMMQ8TF30 809 aa6.18□□□□□ -1.42
ALMS1-IT1-201ENST00000441587 NANOS1Q8WY41 292 aaKnown RBP6.18□□□□□ -1.42
ALMS1-IT1-201ENST00000441587 VPS50Q96JG6 964 aa6.18□□□□□ -1.42
ALMS1-IT1-201ENST00000441587 PHACTR3Q96KR7 559 aa6.18□□□□□ -1.42
ALMS1-IT1-201ENST00000441587 ATP6V1G3Q96LB4 118 aa6.18□□□□□ -1.42
ALMS1-IT1-201ENST00000441587 TRIM47Q96LD4 638 aa6.18□□□□□ -1.42
ALMS1-IT1-201ENST00000441587 TUBGCP5Q96RT8 1024 aa6.18□□□□□ -1.42
ALMS1-IT1-201ENST00000441587 GAL3ST1Q99999 423 aa6.18□□□□□ -1.42
ALMS1-IT1-201ENST00000441587 MYL10Q9BUA6 226 aa6.18□□□□□ -1.42
ALMS1-IT1-201ENST00000441587 C1orf21Q9H246 121 aa6.18□□□□□ -1.42
ALMS1-IT1-201ENST00000441587 SEMA6CQ9H3T2 930 aa6.18□□□□□ -1.42
ALMS1-IT1-201ENST00000441587 PRDM12Q9H4Q4 367 aa6.18□□□□□ -1.42
ALMS1-IT1-201ENST00000441587 PARVGQ9HBI0 331 aa6.18□□□□□ -1.42
ALMS1-IT1-201ENST00000441587 USP40Q9NVE5 1235 aa6.18□□□□□ -1.42
ALMS1-IT1-201ENST00000441587 NMRK1Q9NWW6 199 aa6.18□□□□□ -1.42
ALMS1-IT1-201ENST00000441587 COQ3Q9NZJ6 369 aa6.18□□□□□ -1.42
ALMS1-IT1-201ENST00000441587 SLC39A10Q9ULF5 831 aa6.18□□□□□ -1.42
ALMS1-IT1-201ENST00000441587 COA3Q9Y2R0 106 aaPredicted RBP6.18□□□□□ -1.42
ALMS1-IT1-201ENST00000441587 PI4KAP2A4QPH2 592 aa6.17□□□□□ -1.42
ALMS1-IT1-201ENST00000441587 IQCJ-SCHIP1C9J366 451 aaPredicted RBP6.17□□□□□ -1.42
ALMS1-IT1-201ENST00000441587 GOLGA6L19H0YKK7 550 aa6.17□□□□□ -1.42
ALMS1-IT1-201ENST00000441587 NPC1O15118 1278 aa6.17□□□□□ -1.42
ALMS1-IT1-201ENST00000441587 MAGEB3O15480 346 aa6.17□□□□□ -1.42
ALMS1-IT1-201ENST00000441587 POLR2DO15514 142 aaKnown RBP6.17□□□□□ -1.42
ALMS1-IT1-201ENST00000441587 SOAT2O75908 522 aa6.17□□□□□ -1.42
ALMS1-IT1-201ENST00000441587 KITP10721 976 aa6.17□□□□□ -1.42
ALMS1-IT1-201ENST00000441587 BCRP11274 1271 aa6.17□□□□□ -1.42
ALMS1-IT1-201ENST00000441587 LTKP29376 864 aa6.17□□□□□ -1.42
ALMS1-IT1-201ENST00000441587 SDHAP31040 664 aa6.17□□□□□ -1.42
ALMS1-IT1-201ENST00000441587 SERPINF1P36955 418 aa6.17□□□□□ -1.42
ALMS1-IT1-201ENST00000441587 WASP42768 502 aa6.17□□□□□ -1.42
ALMS1-IT1-201ENST00000441587 IFI35P80217 286 aaPredicted RBP6.17□□□□□ -1.42
ALMS1-IT1-201ENST00000441587 NRG1Q02297 640 aaPredicted RBP6.17□□□□□ -1.42
ALMS1-IT1-201ENST00000441587 DSC2Q02487 901 aa6.17□□□□□ -1.42
ALMS1-IT1-201ENST00000441587 SNAPC2Q13487 334 aa6.17□□□□□ -1.42
ALMS1-IT1-201ENST00000441587 TRIM25Q14258 630 aaKnown RBP6.17□□□□□ -1.42
ALMS1-IT1-201ENST00000441587 MAPKAPK3Q16644 382 aa6.17□□□□□ -1.42
ALMS1-IT1-201ENST00000441587 TIGD6Q17RP2 521 aa6.17□□□□□ -1.42
ALMS1-IT1-201ENST00000441587 CCDC40Q4G0X9 1142 aa6.17□□□□□ -1.42
ALMS1-IT1-201ENST00000441587 KIAA1328Q86T90 577 aa6.17□□□□□ -1.42
ALMS1-IT1-201ENST00000441587 SESTD1Q86VW0 696 aa6.17□□□□□ -1.42
ALMS1-IT1-201ENST00000441587 CRIPAKQ8N1N5 446 aa6.17□□□□□ -1.42
ALMS1-IT1-201ENST00000441587 TOP6BLQ8N6T0 577 aa6.17□□□□□ -1.42
ALMS1-IT1-201ENST00000441587 FBXO15Q8NCQ5 510 aaPredicted RBP6.17□□□□□ -1.42
ALMS1-IT1-201ENST00000441587 LINC00116Q8NCU8 138 aa6.17□□□□□ -1.42
ALMS1-IT1-201ENST00000441587 TTLL11Q8NHH1 800 aa6.17□□□□□ -1.42
ALMS1-IT1-201ENST00000441587 DPF2Q92785 391 aa6.17□□□□□ -1.42
ALMS1-IT1-201ENST00000441587 ARL5BQ96KC2 179 aa6.17□□□□□ -1.42
ALMS1-IT1-201ENST00000441587 FAM167AQ96KS9 214 aa6.17□□□□□ -1.42
ALMS1-IT1-201ENST00000441587 PYM1Q9BRP8 204 aaKnown RBP6.17□□□□□ -1.42
ALMS1-IT1-201ENST00000441587 RIOK1Q9BRS2 568 aaKnown RBP6.17□□□□□ -1.42
ALMS1-IT1-201ENST00000441587 ACPTQ9BZG2 426 aa6.17□□□□□ -1.42
ALMS1-IT1-201ENST00000441587 SLC6A20Q9NP91 592 aa6.17□□□□□ -1.42
ALMS1-IT1-201ENST00000441587 TUBA8Q9NY65 449 aaPredicted RBP6.17□□□□□ -1.42
ALMS1-IT1-201ENST00000441587 MTRF1LQ9UGC7 380 aaKnown RBP6.17□□□□□ -1.42
ALMS1-IT1-201ENST00000441587 SRP68Q9UHB9 627 aaKnown RBP6.17□□□□□ -1.42
ALMS1-IT1-201ENST00000441587 TCFL5Q9UL49 500 aa6.17□□□□□ -1.42
ALMS1-IT1-201ENST00000441587 MED16Q9Y2X0 877 aa6.17□□□□□ -1.42
ALMS1-IT1-201ENST00000441587 CHTOPQ9Y3Y2 248 aaKnown RBP6.17□□□□□ -1.42
ALMS1-IT1-201ENST00000441587 DTNAQ9Y4J8 743 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms