RNA–Protein interactions for RNA: ENST00000441089.1

PTPN4-206, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 671 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-206ENST00000441089 HAUS3Q68CZ6 603 aa5.2□□□□□ -1.58
PTPN4-206ENST00000441089 ISM2Q6H9L7 571 aa5.2□□□□□ -1.58
PTPN4-206ENST00000441089 ZNF746Q6NUN9 644 aaPredicted RBP5.2□□□□□ -1.58
PTPN4-206ENST00000441089 MTHFD1LQ6UB35 978 aa5.2□□□□□ -1.58
PTPN4-206ENST00000441089 ABHD15Q6UXT9 468 aa5.2□□□□□ -1.58
PTPN4-206ENST00000441089 ATG14Q6ZNE5 492 aa5.2□□□□□ -1.58
PTPN4-206ENST00000441089 C11orf57Q6ZUT1 292 aaPredicted RBP5.2□□□□□ -1.58
PTPN4-206ENST00000441089 MIER3Q7Z3K6 550 aa5.2□□□□□ -1.58
PTPN4-206ENST00000441089 GRASPQ7Z6J2 395 aaPredicted RBP5.2□□□□□ -1.58
PTPN4-206ENST00000441089 ZNF280BQ86YH2 543 aa5.2□□□□□ -1.58
PTPN4-206ENST00000441089 CCDC60Q8IWA6 550 aaPredicted RBP5.2□□□□□ -1.58
PTPN4-206ENST00000441089 TPH2Q8IWU9 490 aa5.2□□□□□ -1.58
PTPN4-206ENST00000441089 GPR65Q8IYL9 337 aa5.2□□□□□ -1.58
PTPN4-206ENST00000441089 CEP57L1Q8IYX8 460 aa5.2□□□□□ -1.58
PTPN4-206ENST00000441089 SYNPOQ8N3V7 929 aa5.2□□□□□ -1.58
PTPN4-206ENST00000441089 FBXO15Q8NCQ5 510 aaPredicted RBP5.2□□□□□ -1.58
PTPN4-206ENST00000441089 ERMNQ8TAM6 284 aa5.2□□□□□ -1.58
PTPN4-206ENST00000441089 SPATA20Q8TB22 786 aa5.2□□□□□ -1.58
PTPN4-206ENST00000441089 LARP4BQ92615 738 aaKnown RBP5.2□□□□□ -1.58
PTPN4-206ENST00000441089 SYAP1Q96A49 352 aaPredicted RBP5.2□□□□□ -1.58
PTPN4-206ENST00000441089 ELSPBP1Q96BH3 223 aa5.2□□□□□ -1.58
PTPN4-206ENST00000441089 DNAJC19Q96DA6 116 aa5.2□□□□□ -1.58
PTPN4-206ENST00000441089 ZBTB10Q96DT7 871 aa5.2□□□□□ -1.58
PTPN4-206ENST00000441089 CALML4Q96GE6 196 aa5.2□□□□□ -1.58
PTPN4-206ENST00000441089 FRMD6Q96NE9 622 aa5.2□□□□□ -1.58
PTPN4-206ENST00000441089 C7orf25Q9BPX7 421 aa5.2□□□□□ -1.58
PTPN4-206ENST00000441089 SDF4Q9BRK5 362 aa5.2□□□□□ -1.58
PTPN4-206ENST00000441089 PYM1Q9BRP8 204 aaKnown RBP5.2□□□□□ -1.58
PTPN4-206ENST00000441089 LXNQ9BS40 222 aa5.2□□□□□ -1.58
PTPN4-206ENST00000441089 VN1R3Q9BXE9 311 aa5.2□□□□□ -1.58
PTPN4-206ENST00000441089 TRIM9Q9C026 710 aa5.2□□□□□ -1.58
PTPN4-206ENST00000441089 NRDE2Q9H7Z3 1164 aa5.2□□□□□ -1.58
PTPN4-206ENST00000441089 RXFP1Q9HBX9 757 aa5.2□□□□□ -1.58
PTPN4-206ENST00000441089 ATP13A1Q9HD20 1204 aa5.2□□□□□ -1.58
PTPN4-206ENST00000441089 TUFT1Q9NNX1 390 aa5.2□□□□□ -1.58
PTPN4-206ENST00000441089 SEMA3GQ9NS98 782 aa5.2□□□□□ -1.58
PTPN4-206ENST00000441089 GDE1Q9NZC3 331 aa5.2□□□□□ -1.58
PTPN4-206ENST00000441089 SLC9A2Q9UBY0 812 aa5.2□□□□□ -1.58
PTPN4-206ENST00000441089 USP25Q9UHP3 1055 aa5.2□□□□□ -1.58
PTPN4-206ENST00000441089 MAN1B1Q9UKM7 699 aa5.2□□□□□ -1.58
PTPN4-206ENST00000441089 PIAS3Q9Y6X2 628 aa5.2□□□□□ -1.58
PTPN4-206ENST00000441089 VWA8A3KMH1 1905 aa5.2□□□□□ -1.58
PTPN4-206ENST00000441089 ADAMTS9Q9P2N4 1935 aa5.2□□□□□ -1.58
PTPN4-206ENST00000441089 CRYBG3Q68DQ2 2970 aa5.19□□□□□ -1.58
PTPN4-206ENST00000441089 CEP192Q8TEP8 1941 aa5.19□□□□□ -1.58
PTPN4-206ENST00000441089 NPHP3-ACAD11A0A0J9YXS1 232 aa5.19□□□□□ -1.58
PTPN4-206ENST00000441089 ETV2O00321 342 aaPredicted RBP5.19□□□□□ -1.58
PTPN4-206ENST00000441089 TGM5O43548 720 aa5.19□□□□□ -1.58
PTPN4-206ENST00000441089 P4HBP07237 508 aaKnown RBP5.19□□□□□ -1.58
PTPN4-206ENST00000441089 SPATA31D3P0C874 917 aa5.19□□□□□ -1.58
PTPN4-206ENST00000441089 MYBP10242 640 aa5.19□□□□□ -1.58
PTPN4-206ENST00000441089 KLRC1P26715 233 aa5.19□□□□□ -1.58
PTPN4-206ENST00000441089 HOXA9P31269 272 aa5.19□□□□□ -1.58
PTPN4-206ENST00000441089 SFNP31947 248 aa5.19□□□□□ -1.58
PTPN4-206ENST00000441089 SLC11A1P49279 550 aa5.19□□□□□ -1.58
PTPN4-206ENST00000441089 PSMC5P62195 406 aa5.19□□□□□ -1.58
PTPN4-206ENST00000441089 MORC3Q14149 939 aa5.19□□□□□ -1.58
PTPN4-206ENST00000441089 DHX8Q14562 1220 aaKnown RBP5.19□□□□□ -1.58
PTPN4-206ENST00000441089 LRRC14Q15048 493 aa5.19□□□□□ -1.58
PTPN4-206ENST00000441089 KIZQ2M2Z5 673 aa5.19□□□□□ -1.58
PTPN4-206ENST00000441089 NOMO2Q5JPE7 1267 aa5.19□□□□□ -1.58
PTPN4-206ENST00000441089 LIN9Q5TKA1 542 aa5.19□□□□□ -1.58
PTPN4-206ENST00000441089 PLA2G4FQ68DD2 849 aa5.19□□□□□ -1.58
PTPN4-206ENST00000441089 SWSAP1Q6NVH7 229 aa5.19□□□□□ -1.58
PTPN4-206ENST00000441089 CNNM4Q6P4Q7 775 aa5.19□□□□□ -1.58
PTPN4-206ENST00000441089 CCNI2Q6ZMN8 369 aaPredicted RBP5.19□□□□□ -1.58
PTPN4-206ENST00000441089 AGMOQ6ZNB7 445 aa5.19□□□□□ -1.58
PTPN4-206ENST00000441089 SPATA31D4Q6ZUB0 917 aa5.19□□□□□ -1.58
PTPN4-206ENST00000441089 PLPPR4Q7Z2D5 763 aa5.19□□□□□ -1.58
PTPN4-206ENST00000441089 PIP4P1Q86T03 277 aa5.19□□□□□ -1.58
PTPN4-206ENST00000441089 C11orf74Q86VG3 221 aa5.19□□□□□ -1.58
PTPN4-206ENST00000441089 PALB2Q86YC2 1186 aa5.19□□□□□ -1.58
PTPN4-206ENST00000441089 C4orf19Q8IY42 314 aa5.19□□□□□ -1.58
PTPN4-206ENST00000441089 SMAP1Q8IYB5 467 aaPredicted RBP5.19□□□□□ -1.58
PTPN4-206ENST00000441089 KIAA0319LQ8IZA0 1049 aa5.19□□□□□ -1.58
PTPN4-206ENST00000441089 SYT2Q8N9I0 419 aaPredicted RBP5.19□□□□□ -1.58
PTPN4-206ENST00000441089 RDM1Q8NG50 284 aa5.19□□□□□ -1.58
PTPN4-206ENST00000441089 RASSF8Q8NHQ8 419 aa5.19□□□□□ -1.58
PTPN4-206ENST00000441089 MDM1Q8TC05 714 aa5.19□□□□□ -1.58
PTPN4-206ENST00000441089 URGCPQ8TCY9 931 aa5.19□□□□□ -1.58
PTPN4-206ENST00000441089 PIGOQ8TEQ8 1089 aa5.19□□□□□ -1.58
PTPN4-206ENST00000441089 TRAPPC12Q8WVT3 735 aa5.19□□□□□ -1.58
PTPN4-206ENST00000441089 ADAMTS14Q8WXS8 1223 aa5.19□□□□□ -1.58
PTPN4-206ENST00000441089 MED15Q96RN5 788 aa5.19□□□□□ -1.58
PTPN4-206ENST00000441089 CEP89Q96ST8 783 aa5.19□□□□□ -1.58
PTPN4-206ENST00000441089 SH2D3AQ9BRG2 576 aa5.19□□□□□ -1.58
PTPN4-206ENST00000441089 TMEM175Q9BSA9 504 aa5.19□□□□□ -1.58
PTPN4-206ENST00000441089 HERC2P3Q9BVR0 1158 aa5.19□□□□□ -1.58
PTPN4-206ENST00000441089 TRMT61BQ9BVS5 477 aaKnown RBP5.19□□□□□ -1.58
PTPN4-206ENST00000441089 APOL6Q9BWW8 343 aa5.19□□□□□ -1.58
PTPN4-206ENST00000441089 FGFBP2Q9BYJ0 223 aa5.19□□□□□ -1.58
PTPN4-206ENST00000441089 GBP3Q9H0R5 595 aa5.19□□□□□ -1.58
PTPN4-206ENST00000441089 DUSP15Q9H1R2 295 aaPredicted RBP5.19□□□□□ -1.58
PTPN4-206ENST00000441089 BHMT2Q9H2M3 363 aa5.19□□□□□ -1.58
PTPN4-206ENST00000441089 CUEDC2Q9H467 287 aa5.19□□□□□ -1.58
PTPN4-206ENST00000441089 MAGEF1Q9HAY2 307 aa5.19□□□□□ -1.58
PTPN4-206ENST00000441089 POLD4Q9HCU8 107 aa5.19□□□□□ -1.58
PTPN4-206ENST00000441089 TBC1D13Q9NVG8 400 aa5.19□□□□□ -1.58
PTPN4-206ENST00000441089 FNIP2Q9P278 1114 aa5.19□□□□□ -1.58
PTPN4-206ENST00000441089 GABBR1Q9UBS5 961 aa5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms