RNA–Protein interactions for RNA: ENST00000440653.1

HDAC6-209, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 658 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-209ENST00000440653 TAF6P49848 677 aa9.55□□□□□ -0.88
HDAC6-209ENST00000440653 NKX3-2P78367 333 aa9.55□□□□□ -0.88
HDAC6-209ENST00000440653 ZXDAP98168 799 aa9.55□□□□□ -0.88
HDAC6-209ENST00000440653 NR1H3Q13133 447 aa9.55□□□□□ -0.88
HDAC6-209ENST00000440653 SNX1Q13596 522 aa9.55□□□□□ -0.88
HDAC6-209ENST00000440653 STAT4Q14765 748 aa9.55□□□□□ -0.88
HDAC6-209ENST00000440653 PDK2Q15119 407 aa9.55□□□□□ -0.88
HDAC6-209ENST00000440653 C9orf57Q5W0N0 161 aa9.55□□□□□ -0.88
HDAC6-209ENST00000440653 HIBCHQ6NVY1 386 aaPredicted RBP9.55□□□□□ -0.88
HDAC6-209ENST00000440653 ALKAL1Q6UXT8 129 aa9.55□□□□□ -0.88
HDAC6-209ENST00000440653 LRRC31Q6UY01 552 aa9.55□□□□□ -0.88
HDAC6-209ENST00000440653 MICALCLQ6ZW33 695 aa9.55□□□□□ -0.88
HDAC6-209ENST00000440653 DPH6Q7L8W6 267 aa9.55□□□□□ -0.88
HDAC6-209ENST00000440653 TOP6BLQ8N6T0 577 aa9.55□□□□□ -0.88
HDAC6-209ENST00000440653 C7orf31Q8N865 590 aa9.55□□□□□ -0.88
HDAC6-209ENST00000440653 SLC35B2Q8TB61 432 aa9.55□□□□□ -0.88
HDAC6-209ENST00000440653 SPATA18Q8TC71 538 aa9.55□□□□□ -0.88
HDAC6-209ENST00000440653 RNF25Q96BH1 459 aaPredicted RBP9.55□□□□□ -0.88
HDAC6-209ENST00000440653 CENPTQ96BT3 561 aa9.55□□□□□ -0.88
HDAC6-209ENST00000440653 CFAP57Q96MR6 1250 aa9.55□□□□□ -0.88
HDAC6-209ENST00000440653 SLC9A7Q96T83 725 aa9.55□□□□□ -0.88
HDAC6-209ENST00000440653 CCDC77Q9BR77 488 aa9.55□□□□□ -0.88
HDAC6-209ENST00000440653 HERPUD2Q9BSE4 406 aa9.55□□□□□ -0.88
HDAC6-209ENST00000440653 MTG1Q9BT17 334 aaPredicted RBP9.55□□□□□ -0.88
HDAC6-209ENST00000440653 UPF3AQ9H1J1 476 aaKnown RBP9.55□□□□□ -0.88
HDAC6-209ENST00000440653 EPN3Q9H201 632 aa9.55□□□□□ -0.88
HDAC6-209ENST00000440653 NXF3Q9H4D5 531 aaKnown RBP9.55□□□□□ -0.88
HDAC6-209ENST00000440653 SNTG2Q9NY99 539 aa9.55□□□□□ -0.88
HDAC6-209ENST00000440653 CYTH4Q9UIA0 394 aa9.55□□□□□ -0.88
HDAC6-209ENST00000440653 GGA2Q9UJY4 613 aa9.55□□□□□ -0.88
HDAC6-209ENST00000440653 ZNF148Q9UQR1 794 aa9.55□□□□□ -0.88
HDAC6-209ENST00000440653 R3HDM2Q9Y2K5 976 aaKnown RBP9.55□□□□□ -0.88
HDAC6-209ENST00000440653 SNX9Q9Y5X1 595 aa9.55□□□□□ -0.88
HDAC6-209ENST00000440653 FASNP49327 2511 aaKnown RBP9.55□□□□□ -0.88
HDAC6-209ENST00000440653 USP24Q9UPU5 2620 aa9.54□□□□□ -0.88
HDAC6-209ENST00000440653 C3orf70A6NLC5 250 aaPredicted RBP9.54□□□□□ -0.88
HDAC6-209ENST00000440653 C2CD4BA6NLJ0 364 aa9.54□□□□□ -0.88
HDAC6-209ENST00000440653 E5RJQ4 531 aa9.54□□□□□ -0.88
HDAC6-209ENST00000440653 NDUFAB1O14561 156 aa9.54□□□□□ -0.88
HDAC6-209ENST00000440653 PRPSAP2O60256 369 aa9.54□□□□□ -0.88
HDAC6-209ENST00000440653 CDH16O75309 829 aa9.54□□□□□ -0.88
HDAC6-209ENST00000440653 CSDE1O75534 798 aaKnown RBP9.54□□□□□ -0.88
HDAC6-209ENST00000440653 GJB6O95452 261 aa9.54□□□□□ -0.88
HDAC6-209ENST00000440653 TTC4O95801 387 aa9.54□□□□□ -0.88
HDAC6-209ENST00000440653 TSHRP16473 764 aa9.54□□□□□ -0.88
HDAC6-209ENST00000440653 TGM2P21980 687 aa9.54□□□□□ -0.88
HDAC6-209ENST00000440653 LRPAP1P30533 357 aa9.54□□□□□ -0.88
HDAC6-209ENST00000440653 HPDP32754 393 aaPredicted RBP9.54□□□□□ -0.88
HDAC6-209ENST00000440653 RAB27AP51159 221 aa9.54□□□□□ -0.88
HDAC6-209ENST00000440653 CDH8P55286 799 aa9.54□□□□□ -0.88
HDAC6-209ENST00000440653 SLC8A3P57103 927 aa9.54□□□□□ -0.88
HDAC6-209ENST00000440653 MRPS6P82932 125 aaKnown RBP9.54□□□□□ -0.88
HDAC6-209ENST00000440653 PURAQ00577 322 aaKnown RBP9.54□□□□□ -0.88
HDAC6-209ENST00000440653 SLC29A2Q14542 456 aa9.54□□□□□ -0.88
HDAC6-209ENST00000440653 PTGISQ16647 500 aa9.54□□□□□ -0.88
HDAC6-209ENST00000440653 PKDCCQ504Y2 493 aa9.54□□□□□ -0.88
HDAC6-209ENST00000440653 OLFML1Q6UWY5 402 aa9.54□□□□□ -0.88
HDAC6-209ENST00000440653 C4orf22Q6V702 233 aa9.54□□□□□ -0.88
HDAC6-209ENST00000440653 PPP1R21Q6ZMI0 780 aa9.54□□□□□ -0.88
HDAC6-209ENST00000440653 FAM183BPQ6ZVS7 135 aa9.54□□□□□ -0.88
HDAC6-209ENST00000440653 B4GALNT4Q76KP1 1039 aa9.54□□□□□ -0.88
HDAC6-209ENST00000440653 SLC26A9Q7LBE3 791 aa9.54□□□□□ -0.88
HDAC6-209ENST00000440653 PHLDB2Q86SQ0 1253 aa9.54□□□□□ -0.88
HDAC6-209ENST00000440653 RPAINQ86UA6 219 aa9.54□□□□□ -0.88
HDAC6-209ENST00000440653 CCDC25Q86WR0 208 aa9.54□□□□□ -0.88
HDAC6-209ENST00000440653 CNPY4Q8N129 248 aa9.54□□□□□ -0.88
HDAC6-209ENST00000440653 CMASQ8NFW8 434 aaPredicted RBP9.54□□□□□ -0.88
HDAC6-209ENST00000440653 OR2W6PQ8NHA6 318 aa9.54□□□□□ -0.88
HDAC6-209ENST00000440653 JOSD2Q8TAC2 188 aa9.54□□□□□ -0.88
HDAC6-209ENST00000440653 PHOSPHO2Q8TCD6 241 aa9.54□□□□□ -0.88
HDAC6-209ENST00000440653 BCAS4Q8TDM0 211 aa9.54□□□□□ -0.88
HDAC6-209ENST00000440653 HAUS1Q96CS2 278 aa9.54□□□□□ -0.88
HDAC6-209ENST00000440653 ZNF670Q9BS34 389 aa9.54□□□□□ -0.88
HDAC6-209ENST00000440653 HEMGNQ9BXL5 484 aa9.54□□□□□ -0.88
HDAC6-209ENST00000440653 SLC4A5Q9BY07 1137 aa9.54□□□□□ -0.88
HDAC6-209ENST00000440653 EIF2AQ9BY44 585 aaKnown RBP9.54□□□□□ -0.88
HDAC6-209ENST00000440653 FRMD8Q9BZ67 464 aaPredicted RBP9.54□□□□□ -0.88
HDAC6-209ENST00000440653 CHST12Q9NRB3 414 aa9.54□□□□□ -0.88
HDAC6-209ENST00000440653 KLHL11Q9NVR0 708 aa9.54□□□□□ -0.88
HDAC6-209ENST00000440653 TUBGCP4Q9UGJ1 667 aa9.54□□□□□ -0.88
HDAC6-209ENST00000440653 FETUBQ9UGM5 382 aa9.54□□□□□ -0.88
HDAC6-209ENST00000440653 LGALS13Q9UHV8 139 aa9.54□□□□□ -0.88
HDAC6-209ENST00000440653 USP18Q9UMW8 372 aa9.54□□□□□ -0.88
HDAC6-209ENST00000440653 TRPV2Q9Y5S1 764 aa9.54□□□□□ -0.88
HDAC6-209ENST00000440653 ACTL7BQ9Y614 415 aa9.54□□□□□ -0.88
HDAC6-209ENST00000440653 TDRD15B5MCY1 1934 aaKnown RBP9.54□□□□□ -0.88
HDAC6-209ENST00000440653 SETXQ7Z333 2677 aaKnown RBP9.54□□□□□ -0.88
HDAC6-209ENST00000440653 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.53□□□□□ -0.88
HDAC6-209ENST00000440653 A0A087WUV0 522 aaPredicted RBP9.53□□□□□ -0.88
HDAC6-209ENST00000440653 EBAG9O00559 213 aa9.53□□□□□ -0.88
HDAC6-209ENST00000440653 PIRO00625 290 aa9.53□□□□□ -0.88
HDAC6-209ENST00000440653 HUS1O60921 280 aa9.53□□□□□ -0.88
HDAC6-209ENST00000440653 TRUB2O95900 331 aaKnown RBP9.53□□□□□ -0.88
HDAC6-209ENST00000440653 FAM107AO95990 144 aa9.53□□□□□ -0.88
HDAC6-209ENST00000440653 PDGFBP01127 241 aaPredicted RBP9.53□□□□□ -0.88
HDAC6-209ENST00000440653 ZFXP17010 805 aaPredicted RBP9.53□□□□□ -0.88
HDAC6-209ENST00000440653 WARSP23381 471 aaKnown RBP9.53□□□□□ -0.88
HDAC6-209ENST00000440653 KDELR1P24390 212 aa9.53□□□□□ -0.88
HDAC6-209ENST00000440653 CST5P28325 142 aaPredicted RBP9.53□□□□□ -0.88
HDAC6-209ENST00000440653 MIPP30301 263 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms