RNA–Protein interactions for RNA: ENST00000440088.5

APTR-204, Transcript of Alu-mediated CDKN1A/p21 transcriptional regulator, humanhuman

TSL 1 (best) BASIC

Gene APTR, Length 2,029 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTR-204ENST00000440088 SNRNP25Q9BV90 132 aaKnown RBP20.52■□□□□ 0.88
APTR-204ENST00000440088 ZNF446Q9NWS9 450 aa20.52■□□□□ 0.88
APTR-204ENST00000440088 FEZ2Q9UHY8 353 aaPredicted RBP20.52■□□□□ 0.88
APTR-204ENST00000440088 NAALADL1Q9UQQ1 740 aa20.52■□□□□ 0.88
APTR-204ENST00000440088 R3HDM2Q9Y2K5 976 aaKnown RBP20.52■□□□□ 0.88
APTR-204ENST00000440088 TNFRSF10BO14763 440 aa20.51■□□□□ 0.87
APTR-204ENST00000440088 TRIM66O15016 1216 aa20.51■□□□□ 0.87
APTR-204ENST00000440088 ENDOD1O94919 500 aa20.51■□□□□ 0.87
APTR-204ENST00000440088 FYNP06241 537 aa20.51■□□□□ 0.87
APTR-204ENST00000440088 NCAM1P13591 858 aa20.51■□□□□ 0.87
APTR-204ENST00000440088 PTGIRP43119 386 aa20.51■□□□□ 0.87
APTR-204ENST00000440088 MAGEA11P43364 429 aa20.51■□□□□ 0.87
APTR-204ENST00000440088 KCNJ1P48048 391 aa20.51■□□□□ 0.87
APTR-204ENST00000440088 ARPP19P56211 112 aa20.51■□□□□ 0.87
APTR-204ENST00000440088 GPR17Q13304 367 aa20.51■□□□□ 0.87
APTR-204ENST00000440088 BHLHA9Q7RTU4 235 aa20.51■□□□□ 0.87
APTR-204ENST00000440088 IFT81Q8WYA0 676 aa20.51■□□□□ 0.87
APTR-204ENST00000440088 ZNF558Q96NG5 402 aa20.51■□□□□ 0.87
APTR-204ENST00000440088 TRIM62Q9BVG3 475 aa20.51■□□□□ 0.87
APTR-204ENST00000440088 PRDM10Q9NQV6 1147 aa20.51■□□□□ 0.87
APTR-204ENST00000440088 RRN3Q9NYV6 651 aa20.51■□□□□ 0.87
APTR-204ENST00000440088 CARNS1A5YM72 827 aa20.51■□□□□ 0.87
APTR-204ENST00000440088 BHMG1C9JSJ3 638 aaPredicted RBP20.51■□□□□ 0.87
APTR-204ENST00000440088 M0QYT0 321 aa20.51■□□□□ 0.87
APTR-204ENST00000440088 ECEL1O95672 775 aa20.51■□□□□ 0.87
APTR-204ENST00000440088 CARSP49589 748 aaKnown RBP20.51■□□□□ 0.87
APTR-204ENST00000440088 ATXN1P54253 815 aaKnown RBP20.51■□□□□ 0.87
APTR-204ENST00000440088 SNX1Q13596 522 aa20.51■□□□□ 0.87
APTR-204ENST00000440088 CUL1Q13616 776 aa20.51■□□□□ 0.87
APTR-204ENST00000440088 KRT81Q14533 505 aa20.51■□□□□ 0.87
APTR-204ENST00000440088 BNIPLQ7Z465 357 aa20.51■□□□□ 0.87
APTR-204ENST00000440088 SCAMP5Q8TAC9 235 aa20.51■□□□□ 0.87
APTR-204ENST00000440088 CASKIN2Q8WXE0 1202 aa20.51■□□□□ 0.87
APTR-204ENST00000440088 SEC14L1Q92503 715 aa20.51■□□□□ 0.87
APTR-204ENST00000440088 SLCO2A1Q92959 643 aa20.51■□□□□ 0.87
APTR-204ENST00000440088 C8orf48Q96LL4 319 aa20.51■□□□□ 0.87
APTR-204ENST00000440088 ERP44Q9BS26 406 aa20.51■□□□□ 0.87
APTR-204ENST00000440088 TRIM51Q9BSJ1 452 aa20.51■□□□□ 0.87
APTR-204ENST00000440088 CALCOCO1Q9P1Z2 691 aa20.51■□□□□ 0.87
APTR-204ENST00000440088 RDXP35241 583 aaKnown RBP20.5■□□□□ 0.87
APTR-204ENST00000440088 ARSEP51690 589 aa20.5■□□□□ 0.87
APTR-204ENST00000440088 PPIGQ13427 754 aaKnown RBP eCLIP20.5■□□□□ 0.87
APTR-204ENST00000440088 BBS12Q6ZW61 710 aa20.5■□□□□ 0.87
APTR-204ENST00000440088 VSIG1Q86XK7 387 aa20.5■□□□□ 0.87
APTR-204ENST00000440088 GSPT2Q8IYD1 628 aaKnown RBP20.5■□□□□ 0.87
APTR-204ENST00000440088 RNF168Q8IYW5 571 aaPredicted RBP20.5■□□□□ 0.87
APTR-204ENST00000440088 EIF1ADQ8N9N8 165 aaKnown RBP20.5■□□□□ 0.87
APTR-204ENST00000440088 ATAD1Q8NBU5 361 aa20.5■□□□□ 0.87
APTR-204ENST00000440088 SPPL2BQ8TCT7 592 aa20.5■□□□□ 0.87
APTR-204ENST00000440088 GRK7Q8WTQ7 553 aa20.5■□□□□ 0.87
APTR-204ENST00000440088 YME1L1Q96TA2 773 aa20.5■□□□□ 0.87
APTR-204ENST00000440088 PCDH10Q9P2E7 1040 aa20.5■□□□□ 0.87
APTR-204ENST00000440088 CST8O60676 142 aa20.49■□□□□ 0.87
APTR-204ENST00000440088 LAG3P18627 525 aa20.49■□□□□ 0.87
APTR-204ENST00000440088 EPHB4P54760 987 aa20.49■□□□□ 0.87
APTR-204ENST00000440088 PITX1P78337 314 aaPredicted RBP20.49■□□□□ 0.87
APTR-204ENST00000440088 DPYSL3Q14195 570 aa20.49■□□□□ 0.87
APTR-204ENST00000440088 ZC3H12AQ5D1E8 599 aaKnown RBP20.49■□□□□ 0.87
APTR-204ENST00000440088 OTUD1Q5VV17 481 aaPredicted RBP20.49■□□□□ 0.87
APTR-204ENST00000440088 BSPRYQ5W0U4 402 aa20.49■□□□□ 0.87
APTR-204ENST00000440088 KIAA1841Q6NSI8 718 aa20.49■□□□□ 0.87
APTR-204ENST00000440088 PRSS55Q6UWB4 352 aaPredicted RBP20.49■□□□□ 0.87
APTR-204ENST00000440088 RSPO2Q6UXX9 243 aaPredicted RBP20.49■□□□□ 0.87
APTR-204ENST00000440088 ATL2Q8NHH9 583 aa20.49■□□□□ 0.87
APTR-204ENST00000440088 SLC7A14Q8TBB6 771 aa20.49■□□□□ 0.87
APTR-204ENST00000440088 TMEM169Q96HH4 297 aa20.49■□□□□ 0.87
APTR-204ENST00000440088 MAK16Q9BXY0 300 aaKnown RBP20.49■□□□□ 0.87
APTR-204ENST00000440088 GPATCH2LQ9NWQ4 482 aa20.49■□□□□ 0.87
APTR-204ENST00000440088 MTMR11A4FU01 709 aa20.49■□□□□ 0.87
APTR-204ENST00000440088 DEUP1Q05D60 604 aa20.49■□□□□ 0.87
APTR-204ENST00000440088 IFRD2Q12894 506 aaPredicted RBP20.49■□□□□ 0.87
APTR-204ENST00000440088 TRADDQ15628 312 aa20.49■□□□□ 0.87
APTR-204ENST00000440088 DPYSL2Q16555 572 aa20.49■□□□□ 0.87
APTR-204ENST00000440088 DDR2Q16832 855 aa20.49■□□□□ 0.87
APTR-204ENST00000440088 FAM131BQ86XD5 332 aa20.49■□□□□ 0.87
APTR-204ENST00000440088 RFX6Q8HWS3 928 aa20.49■□□□□ 0.87
APTR-204ENST00000440088 TTC13Q8NBP0 860 aa20.49■□□□□ 0.87
APTR-204ENST00000440088 FBXO22Q8NEZ5 403 aa20.49■□□□□ 0.87
APTR-204ENST00000440088 C2orf15Q8WU43 125 aaKnown RBP20.49■□□□□ 0.87
APTR-204ENST00000440088 RIN2Q8WYP3 895 aaPredicted RBP20.49■□□□□ 0.87
APTR-204ENST00000440088 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP20.49■□□□□ 0.87
APTR-204ENST00000440088 PIK3R5Q8WYR1 880 aa20.49■□□□□ 0.87
APTR-204ENST00000440088 VN1R3Q9BXE9 311 aa20.49■□□□□ 0.87
APTR-204ENST00000440088 MTRRQ9UBK8 725 aa20.49■□□□□ 0.87
APTR-204ENST00000440088 NFU1Q9UMS0 254 aa20.49■□□□□ 0.87
APTR-204ENST00000440088 AP4E1Q9UPM8 1137 aa20.49■□□□□ 0.87
APTR-204ENST00000440088 CDY1Q9Y6F8 540 aa20.49■□□□□ 0.87
APTR-204ENST00000440088 ZBBXA8MT70 800 aa20.48■□□□□ 0.87
APTR-204ENST00000440088 DYNLT1P63172 113 aa20.48■□□□□ 0.87
APTR-204ENST00000440088 NME3Q13232 169 aa20.48■□□□□ 0.87
APTR-204ENST00000440088 PSMD5Q16401 504 aa20.48■□□□□ 0.87
APTR-204ENST00000440088 DUPD1Q68J44 220 aa20.48■□□□□ 0.87
APTR-204ENST00000440088 SLC8B1Q6J4K2 584 aa20.48■□□□□ 0.87
APTR-204ENST00000440088 DRICH1Q6PGQ1 229 aaPredicted RBP20.48■□□□□ 0.87
APTR-204ENST00000440088 C16orf59Q7L2K0 433 aa20.48■□□□□ 0.87
APTR-204ENST00000440088 BEND5Q7L4P6 421 aa20.48■□□□□ 0.87
APTR-204ENST00000440088 NUP93Q8N1F7 819 aa20.48■□□□□ 0.87
APTR-204ENST00000440088 SLC39A11Q8N1S5 342 aa20.48■□□□□ 0.87
APTR-204ENST00000440088 CCDC185Q8N715 623 aa20.48■□□□□ 0.87
APTR-204ENST00000440088 AENQ8WTP8 325 aaKnown RBP20.48■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms