RNA–Protein interactions for RNA: ENST00000439962.1

EDEM3-203, Transcript of ER degradation enhancing alpha-mannosidase like protein 3, humanhuman

TSL 1 (best)

Gene EDEM3, Length 2,872 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM3-203ENST00000439962 PPP2R2AP63151 447 aa4.99□□□□□ -1.61
EDEM3-203ENST00000439962 C1QBPQ07021 282 aaKnown RBP4.99□□□□□ -1.61
EDEM3-203ENST00000439962 PPP3CAQ08209 521 aa4.99□□□□□ -1.61
EDEM3-203ENST00000439962 ZNF844Q08AG5 666 aa4.99□□□□□ -1.61
EDEM3-203ENST00000439962 TWF1Q12792 350 aa4.99□□□□□ -1.61
EDEM3-203ENST00000439962 CBLBQ13191 982 aa4.99□□□□□ -1.61
EDEM3-203ENST00000439962 HLTFQ14527 1009 aaKnown RBP eCLIP4.99□□□□□ -1.61
EDEM3-203ENST00000439962 CLEC16AQ2KHT3 1053 aa4.99□□□□□ -1.61
EDEM3-203ENST00000439962 TNFAIP8L3Q5GJ75 292 aa4.99□□□□□ -1.61
EDEM3-203ENST00000439962 KIAA0319Q5VV43 1072 aa4.99□□□□□ -1.61
EDEM3-203ENST00000439962 C9orf57Q5W0N0 161 aa4.99□□□□□ -1.61
EDEM3-203ENST00000439962 ANKRD54Q6NXT1 300 aa4.99□□□□□ -1.61
EDEM3-203ENST00000439962 DRICH1Q6PGQ1 229 aaPredicted RBP4.99□□□□□ -1.61
EDEM3-203ENST00000439962 DCLRE1AQ6PJP8 1040 aa4.99□□□□□ -1.61
EDEM3-203ENST00000439962 HS6ST3Q8IZP7 471 aa4.99□□□□□ -1.61
EDEM3-203ENST00000439962 RIBC1Q8N443 379 aaPredicted RBP4.99□□□□□ -1.61
EDEM3-203ENST00000439962 EFHBQ8N7U6 833 aa4.99□□□□□ -1.61
EDEM3-203ENST00000439962 ITFG1Q8TB96 612 aa4.99□□□□□ -1.61
EDEM3-203ENST00000439962 IFT81Q8WYA0 676 aa4.99□□□□□ -1.61
EDEM3-203ENST00000439962 TRAIPQ9BWF2 469 aa4.99□□□□□ -1.61
EDEM3-203ENST00000439962 ZNF518BQ9C0D4 1074 aa4.99□□□□□ -1.61
EDEM3-203ENST00000439962 MRPL47Q9HD33 250 aaKnown RBP4.99□□□□□ -1.61
EDEM3-203ENST00000439962 FAM49BQ9NUQ9 324 aa4.99□□□□□ -1.61
EDEM3-203ENST00000439962 SLC38A7Q9NVC3 462 aa4.99□□□□□ -1.61
EDEM3-203ENST00000439962 RAB20Q9NX57 234 aa4.99□□□□□ -1.61
EDEM3-203ENST00000439962 SLC12A6Q9UHW9 1150 aa4.99□□□□□ -1.61
EDEM3-203ENST00000439962 UBQLN1Q9UMX0 589 aaKnown RBP4.99□□□□□ -1.61
EDEM3-203ENST00000439962 COG5Q9UP83 839 aa4.99□□□□□ -1.61
EDEM3-203ENST00000439962 ALG6Q9Y672 507 aa4.99□□□□□ -1.61
EDEM3-203ENST00000439962 KIAA1671Q9BY89 1806 aa4.99□□□□□ -1.61
EDEM3-203ENST00000439962 A0A1W2PRU2 124 aa4.98□□□□□ -1.61
EDEM3-203ENST00000439962 KPNA7A9QM74 516 aa4.98□□□□□ -1.61
EDEM3-203ENST00000439962 SMAPO00193 183 aa4.98□□□□□ -1.61
EDEM3-203ENST00000439962 NARSO43776 548 aaKnown RBP4.98□□□□□ -1.61
EDEM3-203ENST00000439962 HUS1O60921 280 aa4.98□□□□□ -1.61
EDEM3-203ENST00000439962 FSBPO95073 299 aa4.98□□□□□ -1.61
EDEM3-203ENST00000439962 SEC24AO95486 1093 aa4.98□□□□□ -1.61
EDEM3-203ENST00000439962 LSM8O95777 96 aaKnown RBP4.98□□□□□ -1.61
EDEM3-203ENST00000439962 LRG1P02750 347 aa4.98□□□□□ -1.61
EDEM3-203ENST00000439962 CHRNB2P17787 502 aa4.98□□□□□ -1.61
EDEM3-203ENST00000439962 ITIH2P19823 946 aa4.98□□□□□ -1.61
EDEM3-203ENST00000439962 CYP2F1P24903 491 aa4.98□□□□□ -1.61
EDEM3-203ENST00000439962 LSP1P33241 339 aa4.98□□□□□ -1.61
EDEM3-203ENST00000439962 RASA2Q15283 850 aa4.98□□□□□ -1.61
EDEM3-203ENST00000439962 LRRC38Q5VT99 294 aa4.98□□□□□ -1.61
EDEM3-203ENST00000439962 CCDC149Q6ZUS6 474 aa4.98□□□□□ -1.61
EDEM3-203ENST00000439962 JAMLQ86YT9 394 aa4.98□□□□□ -1.61
EDEM3-203ENST00000439962 KLHL7Q8IXQ5 586 aa4.98□□□□□ -1.61
EDEM3-203ENST00000439962 GSPT2Q8IYD1 628 aaKnown RBP4.98□□□□□ -1.61
EDEM3-203ENST00000439962 OR10T2Q8NGX3 314 aa4.98□□□□□ -1.61
EDEM3-203ENST00000439962 PLEKHO2Q8TD55 490 aa4.98□□□□□ -1.61
EDEM3-203ENST00000439962 BCAS4Q8TDM0 211 aa4.98□□□□□ -1.61
EDEM3-203ENST00000439962 IPO4Q8TEX9 1081 aaKnown RBP4.98□□□□□ -1.61
EDEM3-203ENST00000439962 DDX1Q92499 740 aaKnown RBP4.98□□□□□ -1.61
EDEM3-203ENST00000439962 ART4Q93070 314 aa4.98□□□□□ -1.61
EDEM3-203ENST00000439962 BHMTQ93088 406 aa4.98□□□□□ -1.61
EDEM3-203ENST00000439962 HPDLQ96IR7 371 aa4.98□□□□□ -1.61
EDEM3-203ENST00000439962 ANKRD36BP1Q96IX9 119 aa4.98□□□□□ -1.61
EDEM3-203ENST00000439962 ZFYVE19Q96K21 471 aa4.98□□□□□ -1.61
EDEM3-203ENST00000439962 KXD1Q9BQD3 176 aa4.98□□□□□ -1.61
EDEM3-203ENST00000439962 PLCD4Q9BRC7 762 aa4.98□□□□□ -1.61
EDEM3-203ENST00000439962 THAP2Q9H0W7 228 aa4.98□□□□□ -1.61
EDEM3-203ENST00000439962 DPEP3Q9H4B8 488 aa4.98□□□□□ -1.61
EDEM3-203ENST00000439962 TRPC7Q9HCX4 862 aa4.98□□□□□ -1.61
EDEM3-203ENST00000439962 DDX43Q9NXZ2 648 aaKnown RBP4.98□□□□□ -1.61
EDEM3-203ENST00000439962 CNTN3Q9P232 1028 aa4.98□□□□□ -1.61
EDEM3-203ENST00000439962 CTTNBP2NLQ9P2B4 639 aa4.98□□□□□ -1.61
EDEM3-203ENST00000439962 ACTL7BQ9Y614 415 aa4.98□□□□□ -1.61
EDEM3-203ENST00000439962 FAM189A1O60320 539 aa4.98□□□□□ -1.61
EDEM3-203ENST00000439962 ZMYND10O75800 440 aa4.98□□□□□ -1.61
EDEM3-203ENST00000439962 TNNC2P02585 160 aa4.98□□□□□ -1.61
EDEM3-203ENST00000439962 CYP1A1P04798 512 aaPredicted RBP4.98□□□□□ -1.61
EDEM3-203ENST00000439962 FAM153BP0C7A2 387 aa4.98□□□□□ -1.61
EDEM3-203ENST00000439962 UNGP13051 313 aaPredicted RBP4.98□□□□□ -1.61
EDEM3-203ENST00000439962 CYP11B1P15538 503 aa4.98□□□□□ -1.61
EDEM3-203ENST00000439962 CETN2P41208 172 aa4.98□□□□□ -1.61
EDEM3-203ENST00000439962 GYS2P54840 703 aa4.98□□□□□ -1.61
EDEM3-203ENST00000439962 GSCP56915 257 aaPredicted RBP4.98□□□□□ -1.61
EDEM3-203ENST00000439962 FMO1Q01740 532 aa4.98□□□□□ -1.61
EDEM3-203ENST00000439962 DSG1Q02413 1049 aa4.98□□□□□ -1.61
EDEM3-203ENST00000439962 PTK6Q13882 451 aa4.98□□□□□ -1.61
EDEM3-203ENST00000439962 GRM2Q14416 872 aa4.98□□□□□ -1.61
EDEM3-203ENST00000439962 PCBP1Q15365 356 aaKnown RBP eCLIP4.98□□□□□ -1.61
EDEM3-203ENST00000439962 UAP1Q16222 522 aaPredicted RBP4.98□□□□□ -1.61
EDEM3-203ENST00000439962 FAM153CQ494X1 144 aa4.98□□□□□ -1.61
EDEM3-203ENST00000439962 CEP85LQ5SZL2 805 aa4.98□□□□□ -1.61
EDEM3-203ENST00000439962 DCAF12L1Q5VU92 463 aa4.98□□□□□ -1.61
EDEM3-203ENST00000439962 CD300LGQ6UXG3 332 aa4.98□□□□□ -1.61
EDEM3-203ENST00000439962 ALKAL1Q6UXT8 129 aa4.98□□□□□ -1.61
EDEM3-203ENST00000439962 TAOK1Q7L7X3 1001 aa4.98□□□□□ -1.61
EDEM3-203ENST00000439962 TADA2BQ86TJ2 420 aa4.98□□□□□ -1.61
EDEM3-203ENST00000439962 LRRTM3Q86VH5 581 aa4.98□□□□□ -1.61
EDEM3-203ENST00000439962 PHF13Q86YI8 300 aaPredicted RBP4.98□□□□□ -1.61
EDEM3-203ENST00000439962 SLC13A5Q86YT5 568 aaPredicted RBP4.98□□□□□ -1.61
EDEM3-203ENST00000439962 RNF135Q8IUD6 432 aa4.98□□□□□ -1.61
EDEM3-203ENST00000439962 C12orf29Q8N999 325 aa4.98□□□□□ -1.61
EDEM3-203ENST00000439962 ZNF564Q8TBZ8 553 aaPredicted RBP4.98□□□□□ -1.61
EDEM3-203ENST00000439962 ARL8AQ96BM9 186 aa4.98□□□□□ -1.61
EDEM3-203ENST00000439962 TACO1Q9BSH4 297 aaKnown RBP4.98□□□□□ -1.61
EDEM3-203ENST00000439962 SMYD3Q9H7B4 428 aa4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms