RNA–Protein interactions for RNA: ENST00000439561.6

COPB1-202, Transcript of coatomer protein complex subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB1, Length 3,382 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-202ENST00000439561 TMX2Q9Y320 296 aa9.38□□□□□ -0.91
COPB1-202ENST00000439561 HBS1LQ9Y450 684 aaKnown RBP9.38□□□□□ -0.91
COPB1-202ENST00000439561 H0YCG3 227 aa9.38□□□□□ -0.91
COPB1-202ENST00000439561 INO80B-WBP1J3KQ70 363 aa9.38□□□□□ -0.91
COPB1-202ENST00000439561 TBC1D12O60347 775 aa9.38□□□□□ -0.91
COPB1-202ENST00000439561 CST3P01034 146 aaPredicted RBP9.38□□□□□ -0.91
COPB1-202ENST00000439561 UQCRBP14927 111 aa9.38□□□□□ -0.91
COPB1-202ENST00000439561 RBL1P28749 1068 aa9.38□□□□□ -0.91
COPB1-202ENST00000439561 SLC1A6P48664 564 aa9.38□□□□□ -0.91
COPB1-202ENST00000439561 CHN2P52757 468 aa9.38□□□□□ -0.91
COPB1-202ENST00000439561 PKNOX1P55347 436 aa9.38□□□□□ -0.91
COPB1-202ENST00000439561 MRPS9P82933 396 aaKnown RBP9.38□□□□□ -0.91
COPB1-202ENST00000439561 ITGA9Q13797 1035 aa9.38□□□□□ -0.91
COPB1-202ENST00000439561 TATDN1Q6P1N9 297 aa9.38□□□□□ -0.91
COPB1-202ENST00000439561 CES3Q6UWW8 571 aa9.38□□□□□ -0.91
COPB1-202ENST00000439561 NAT8LQ8N9F0 302 aa9.38□□□□□ -0.91
COPB1-202ENST00000439561 CCNYQ8ND76 341 aa9.38□□□□□ -0.91
COPB1-202ENST00000439561 SYTL5Q8TDW5 730 aaPredicted RBP9.38□□□□□ -0.91
COPB1-202ENST00000439561 TMA16Q96EY4 203 aaKnown RBP9.38□□□□□ -0.91
COPB1-202ENST00000439561 CEP41Q9BYV8 373 aa9.38□□□□□ -0.91
COPB1-202ENST00000439561 INO80BQ9C086 356 aaPredicted RBP9.38□□□□□ -0.91
COPB1-202ENST00000439561 RNPEPQ9H4A4 650 aa9.38□□□□□ -0.91
COPB1-202ENST00000439561 CYLDQ9NQC7 956 aa9.38□□□□□ -0.91
COPB1-202ENST00000439561 ADA2Q9NZK5 511 aa9.38□□□□□ -0.91
COPB1-202ENST00000439561 SLC17A6Q9P2U8 582 aa9.38□□□□□ -0.91
COPB1-202ENST00000439561 PLA2G4CQ9UP65 541 aa9.38□□□□□ -0.91
COPB1-202ENST00000439561 PLLPQ9Y342 182 aa9.38□□□□□ -0.91
COPB1-202ENST00000439561 DDX60LQ5H9U9 1706 aaKnown RBP9.38□□□□□ -0.91
COPB1-202ENST00000439561 PTPRJQ12913 1337 aa9.38□□□□□ -0.91
COPB1-202ENST00000439561 SCN7AQ01118 1682 aa9.38□□□□□ -0.91
COPB1-202ENST00000439561 F8W8V4 182 aa9.38□□□□□ -0.91
COPB1-202ENST00000439561 SRGAP2BP0DMP2 458 aa9.38□□□□□ -0.91
COPB1-202ENST00000439561 IL1R2P27930 398 aa9.38□□□□□ -0.91
COPB1-202ENST00000439561 GALK1P51570 392 aa9.38□□□□□ -0.91
COPB1-202ENST00000439561 PRAMEP78395 509 aa9.38□□□□□ -0.91
COPB1-202ENST00000439561 EMC2Q15006 297 aa9.38□□□□□ -0.91
COPB1-202ENST00000439561 SLFN12LQ6IEE8 588 aa9.38□□□□□ -0.91
COPB1-202ENST00000439561 PPP1R2P3Q6NXS1 205 aa9.38□□□□□ -0.91
COPB1-202ENST00000439561 TRMT10BQ6PF06 316 aaKnown RBP9.38□□□□□ -0.91
COPB1-202ENST00000439561 ACAD11Q709F0 780 aa9.38□□□□□ -0.91
COPB1-202ENST00000439561 HACE1Q8IYU2 909 aa9.38□□□□□ -0.91
COPB1-202ENST00000439561 PIWIL2Q8TC59 973 aaKnown RBP9.38□□□□□ -0.91
COPB1-202ENST00000439561 STRA6Q9BX79 667 aa9.38□□□□□ -0.91
COPB1-202ENST00000439561 COPS7BQ9H9Q2 264 aaPredicted RBP9.38□□□□□ -0.91
COPB1-202ENST00000439561 THAP1Q9NVV9 213 aa9.38□□□□□ -0.91
COPB1-202ENST00000439561 LRCH4O75427 683 aa9.37□□□□□ -0.91
COPB1-202ENST00000439561 SUPT3HO75486 399 aa9.37□□□□□ -0.91
COPB1-202ENST00000439561 TGDSO95455 350 aa9.37□□□□□ -0.91
COPB1-202ENST00000439561 SETSIPP0DME0 302 aa9.37□□□□□ -0.91
COPB1-202ENST00000439561 TNFSF9P41273 254 aa9.37□□□□□ -0.91
COPB1-202ENST00000439561 FLOT2Q14254 428 aa9.37□□□□□ -0.91
COPB1-202ENST00000439561 C15orf59Q2T9L4 293 aaPredicted RBP9.37□□□□□ -0.91
COPB1-202ENST00000439561 DPY19L2Q6NUT2 758 aa9.37□□□□□ -0.91
COPB1-202ENST00000439561 PTAR1Q7Z6K3 402 aaPredicted RBP9.37□□□□□ -0.91
COPB1-202ENST00000439561 TRIM74Q86UV6 250 aa9.37□□□□□ -0.91
COPB1-202ENST00000439561 TRIM73Q86UV7 250 aa9.37□□□□□ -0.91
COPB1-202ENST00000439561 MASTLQ96GX5 879 aa9.37□□□□□ -0.91
COPB1-202ENST00000439561 NLRP4Q96MN2 994 aa9.37□□□□□ -0.91
COPB1-202ENST00000439561 NIF3L1Q9GZT8 377 aa9.37□□□□□ -0.91
COPB1-202ENST00000439561 CAAP1Q9H8G2 361 aa9.37□□□□□ -0.91
COPB1-202ENST00000439561 CYP26B1Q9NR63 512 aa9.37□□□□□ -0.91
COPB1-202ENST00000439561 ASNSD1Q9NWL6 643 aa9.37□□□□□ -0.91
COPB1-202ENST00000439561 PAK5Q9P286 719 aa9.37□□□□□ -0.91
COPB1-202ENST00000439561 TTLL3Q9Y4R7 772 aa9.37□□□□□ -0.91
COPB1-202ENST00000439561 RREB1Q92766 1687 aa9.37□□□□□ -0.91
COPB1-202ENST00000439561 SIGLEC16A6NMB1 481 aa9.37□□□□□ -0.91
COPB1-202ENST00000439561 STAMBPO95630 424 aa9.37□□□□□ -0.91
COPB1-202ENST00000439561 LDHAP00338 332 aaKnown RBP9.37□□□□□ -0.91
COPB1-202ENST00000439561 TAP1Q03518 808 aa9.37□□□□□ -0.91
COPB1-202ENST00000439561 CYLC2Q14093 348 aaPredicted RBP9.37□□□□□ -0.91
COPB1-202ENST00000439561 DUOXA2Q1HG44 320 aa9.37□□□□□ -0.91
COPB1-202ENST00000439561 ZNF667Q5HYK9 610 aa9.37□□□□□ -0.91
COPB1-202ENST00000439561 ACBD5Q5T8D3 534 aaPredicted RBP9.37□□□□□ -0.91
COPB1-202ENST00000439561 BBS12Q6ZW61 710 aa9.37□□□□□ -0.91
COPB1-202ENST00000439561 SESTD1Q86VW0 696 aa9.37□□□□□ -0.91
COPB1-202ENST00000439561 CHSY1Q86X52 802 aa9.37□□□□□ -0.91
COPB1-202ENST00000439561 CDAN1Q8IWY9 1227 aa9.37□□□□□ -0.91
COPB1-202ENST00000439561 RNF168Q8IYW5 571 aaPredicted RBP9.37□□□□□ -0.91
COPB1-202ENST00000439561 SLC35B2Q8TB61 432 aa9.37□□□□□ -0.91
COPB1-202ENST00000439561 EME1Q96AY2 570 aa9.37□□□□□ -0.91
COPB1-202ENST00000439561 KCNK16Q96T55 309 aa9.37□□□□□ -0.91
COPB1-202ENST00000439561 DHX35Q9H5Z1 703 aaKnown RBP9.37□□□□□ -0.91
COPB1-202ENST00000439561 RSAD1Q9HA92 442 aa9.37□□□□□ -0.91
COPB1-202ENST00000439561 JPH1Q9HDC5 661 aaPredicted RBP9.37□□□□□ -0.91
COPB1-202ENST00000439561 RNF146Q9NTX7 359 aa9.37□□□□□ -0.91
COPB1-202ENST00000439561 ARHGAP26Q9UNA1 814 aa9.37□□□□□ -0.91
COPB1-202ENST00000439561 POLIQ9UNA4 740 aa9.37□□□□□ -0.91
COPB1-202ENST00000439561 LZTS1Q9Y250 596 aa9.37□□□□□ -0.91
COPB1-202ENST00000439561 ZNF536O15090 1300 aa9.37□□□□□ -0.91
COPB1-202ENST00000439561 ARHGAP10A1A4S6 786 aa9.37□□□□□ -0.91
COPB1-202ENST00000439561 APOC4-APOC2K7ER74 178 aa9.37□□□□□ -0.91
COPB1-202ENST00000439561 APOL1O14791 398 aa9.37□□□□□ -0.91
COPB1-202ENST00000439561 MED7O43513 233 aa9.37□□□□□ -0.91
COPB1-202ENST00000439561 ITM2AO43736 263 aa9.37□□□□□ -0.91
COPB1-202ENST00000439561 SPAG6O75602 509 aa9.37□□□□□ -0.91
COPB1-202ENST00000439561 VNN1O95497 513 aa9.37□□□□□ -0.91
COPB1-202ENST00000439561 APOC2P02655 101 aa9.37□□□□□ -0.91
COPB1-202ENST00000439561 C4BPAP04003 597 aaKnown RBP9.37□□□□□ -0.91
COPB1-202ENST00000439561 SERPINA6P08185 405 aa9.37□□□□□ -0.91
COPB1-202ENST00000439561 F7P08709 466 aaPredicted RBP9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms