RNA–Protein interactions for RNA: ENST00000439518.5

NCKIPSD-206, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 1 (best)

Gene NCKIPSD, Length 1,214 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-206ENST00000439518 TMEM25Q86YD3 366 aa21.41■■□□□ 1.02
NCKIPSD-206ENST00000439518 TMEM176AQ96HP8 235 aa21.41■■□□□ 1.02
NCKIPSD-206ENST00000439518 ARHGEF4Q9NR80 690 aa21.41■■□□□ 1.02
NCKIPSD-206ENST00000439518 SPHK2Q9NRA0 654 aa21.41■■□□□ 1.02
NCKIPSD-206ENST00000439518 DYNC1LI1Q9Y6G9 523 aaKnown RBP21.41■■□□□ 1.02
NCKIPSD-206ENST00000439518 USP3Q9Y6I4 520 aa21.41■■□□□ 1.02
NCKIPSD-206ENST00000439518 A0A1W2PQH9 124 aa21.4■■□□□ 1.02
NCKIPSD-206ENST00000439518 TRIM49BA6NDI0 452 aa21.4■■□□□ 1.02
NCKIPSD-206ENST00000439518 PALM2-AKAP2B1ALY0 433 aaPredicted RBP21.4■■□□□ 1.02
NCKIPSD-206ENST00000439518 APODP05090 189 aa21.4■■□□□ 1.02
NCKIPSD-206ENST00000439518 IRF1P10914 325 aa21.4■■□□□ 1.02
NCKIPSD-206ENST00000439518 DCAF17Q5H9S7 520 aaPredicted RBP21.4■■□□□ 1.02
NCKIPSD-206ENST00000439518 ARHGAP17Q68EM7 881 aa21.4■■□□□ 1.02
NCKIPSD-206ENST00000439518 ZNF276Q8N554 614 aa21.4■■□□□ 1.02
NCKIPSD-206ENST00000439518 SLC35C1Q96A29 364 aa21.4■■□□□ 1.02
NCKIPSD-206ENST00000439518 MTPAPQ9NVV4 582 aaKnown RBP eCLIP21.4■■□□□ 1.02
NCKIPSD-206ENST00000439518 ARMCX3Q9UH62 379 aaPredicted RBP21.4■■□□□ 1.02
NCKIPSD-206ENST00000439518 CDV3Q9UKY7 258 aaKnown RBP21.4■■□□□ 1.02
NCKIPSD-206ENST00000439518 RARGP13631 454 aa21.39■■□□□ 1.01
NCKIPSD-206ENST00000439518 CD44P16070 742 aaKnown RBP21.39■■□□□ 1.01
NCKIPSD-206ENST00000439518 TNFRSF4P43489 277 aa21.39■■□□□ 1.01
NCKIPSD-206ENST00000439518 KIR2DL1P43626 348 aaPredicted RBP21.39■■□□□ 1.01
NCKIPSD-206ENST00000439518 PSEN1P49768 467 aa21.39■■□□□ 1.01
NCKIPSD-206ENST00000439518 ATXN1P54253 815 aaKnown RBP21.39■■□□□ 1.01
NCKIPSD-206ENST00000439518 CRY1Q16526 586 aa21.39■■□□□ 1.01
NCKIPSD-206ENST00000439518 PRR23CQ6ZRP0 262 aa21.39■■□□□ 1.01
NCKIPSD-206ENST00000439518 RASSF3Q86WH2 238 aa21.39■■□□□ 1.01
NCKIPSD-206ENST00000439518 CCDC33Q8N5R6 958 aa21.39■■□□□ 1.01
NCKIPSD-206ENST00000439518 IL17RCQ8NAC3 791 aa21.39■■□□□ 1.01
NCKIPSD-206ENST00000439518 TSTD1Q8NFU3 115 aa21.39■■□□□ 1.01
NCKIPSD-206ENST00000439518 DHTKD1Q96HY7 919 aaPredicted RBP21.39■■□□□ 1.01
NCKIPSD-206ENST00000439518 UBXN6Q9BZV1 441 aa21.39■■□□□ 1.01
NCKIPSD-206ENST00000439518 RALGAPA1Q6GYQ0 2036 aa21.38■■□□□ 1.01
NCKIPSD-206ENST00000439518 PSMA7O14818 248 aa21.38■■□□□ 1.01
NCKIPSD-206ENST00000439518 FOXD2O60548 495 aaPredicted RBP21.38■■□□□ 1.01
NCKIPSD-206ENST00000439518 TULP3O75386 442 aa21.38■■□□□ 1.01
NCKIPSD-206ENST00000439518 EPN2O95208 641 aa21.38■■□□□ 1.01
NCKIPSD-206ENST00000439518 DGKEP52429 567 aa21.38■■□□□ 1.01
NCKIPSD-206ENST00000439518 KDSRQ06136 332 aa21.38■■□□□ 1.01
NCKIPSD-206ENST00000439518 CUL2Q13617 745 aa21.38■■□□□ 1.01
NCKIPSD-206ENST00000439518 PLK5Q496M5 336 aa21.38■■□□□ 1.01
NCKIPSD-206ENST00000439518 HSF5Q4G112 596 aaPredicted RBP21.38■■□□□ 1.01
NCKIPSD-206ENST00000439518 EMC10Q5UCC4 262 aa21.38■■□□□ 1.01
NCKIPSD-206ENST00000439518 BTBD8Q5XKL5 378 aa21.38■■□□□ 1.01
NCKIPSD-206ENST00000439518 ISM2Q6H9L7 571 aa21.38■■□□□ 1.01
NCKIPSD-206ENST00000439518 ALLCQ8N6M5 410 aa21.38■■□□□ 1.01
NCKIPSD-206ENST00000439518 DUSP15Q9H1R2 295 aaPredicted RBP21.38■■□□□ 1.01
NCKIPSD-206ENST00000439518 ARRDC1-AS1Q9H2J1 176 aa21.38■■□□□ 1.01
NCKIPSD-206ENST00000439518 CLIC5Q9NZA1 410 aa21.38■■□□□ 1.01
NCKIPSD-206ENST00000439518 DNMT3LQ9UJW3 386 aa21.38■■□□□ 1.01
NCKIPSD-206ENST00000439518 NAGPAQ9UK23 515 aa21.38■■□□□ 1.01
NCKIPSD-206ENST00000439518 NUDT5Q9UKK9 219 aa21.38■■□□□ 1.01
NCKIPSD-206ENST00000439518 MAN1B1Q9UKM7 699 aa21.38■■□□□ 1.01
NCKIPSD-206ENST00000439518 MED19A0JLT2 244 aaPredicted RBP21.37■■□□□ 1.01
NCKIPSD-206ENST00000439518 MDM4O15151 490 aa21.37■■□□□ 1.01
NCKIPSD-206ENST00000439518 HNRNPLP14866 589 aaKnown RBP eCLIP21.37■■□□□ 1.01
NCKIPSD-206ENST00000439518 BMP6P22004 513 aa21.37■■□□□ 1.01
NCKIPSD-206ENST00000439518 PLA2G4AP47712 749 aa21.37■■□□□ 1.01
NCKIPSD-206ENST00000439518 GOLGA8FQ08AF8 430 aa21.37■■□□□ 1.01
NCKIPSD-206ENST00000439518 GOLGA8DPQ0D2H9 430 aa21.37■■□□□ 1.01
NCKIPSD-206ENST00000439518 STIM1Q13586 685 aa21.37■■□□□ 1.01
NCKIPSD-206ENST00000439518 RAB41Q5JT25 222 aa21.37■■□□□ 1.01
NCKIPSD-206ENST00000439518 C10orf120Q5SQS8 335 aa21.37■■□□□ 1.01
NCKIPSD-206ENST00000439518 TMEM92Q6UXU6 159 aa21.37■■□□□ 1.01
NCKIPSD-206ENST00000439518 NAT16Q8N8M0 369 aa21.37■■□□□ 1.01
NCKIPSD-206ENST00000439518 ANKRD52Q8NB46 1076 aa21.37■■□□□ 1.01
NCKIPSD-206ENST00000439518 CNOT6LQ96LI5 555 aaKnown RBP21.37■■□□□ 1.01
NCKIPSD-206ENST00000439518 CEP63Q96MT8 703 aa21.37■■□□□ 1.01
NCKIPSD-206ENST00000439518 RTKNQ9BST9 563 aa21.37■■□□□ 1.01
NCKIPSD-206ENST00000439518 METTL14Q9HCE5 456 aaKnown RBP21.37■■□□□ 1.01
NCKIPSD-206ENST00000439518 DEC1Q9P2X7 70 aa21.37■■□□□ 1.01
NCKIPSD-206ENST00000439518 PCDHGA5Q9Y5G8 931 aa21.37■■□□□ 1.01
NCKIPSD-206ENST00000439518 SGK1O00141 431 aa21.36■■□□□ 1.01
NCKIPSD-206ENST00000439518 DCLK1O15075 740 aa21.36■■□□□ 1.01
NCKIPSD-206ENST00000439518 KLF8O95600 359 aaPredicted RBP21.36■■□□□ 1.01
NCKIPSD-206ENST00000439518 TIE1P35590 1138 aa21.36■■□□□ 1.01
NCKIPSD-206ENST00000439518 PPP1R2P41236 205 aa21.36■■□□□ 1.01
NCKIPSD-206ENST00000439518 ANO4Q32M45 955 aa21.36■■□□□ 1.01
NCKIPSD-206ENST00000439518 PLA2G2CQ5R387 149 aa21.36■■□□□ 1.01
NCKIPSD-206ENST00000439518 ANO7Q6IWH7 933 aa21.36■■□□□ 1.01
NCKIPSD-206ENST00000439518 TTI2Q6NXR4 508 aa21.36■■□□□ 1.01
NCKIPSD-206ENST00000439518 Q6ZNB5 142 aa21.36■■□□□ 1.01
NCKIPSD-206ENST00000439518 PIGZQ86VD9 579 aa21.36■■□□□ 1.01
NCKIPSD-206ENST00000439518 TXNDC5Q8NBS9 432 aaKnown RBP21.36■■□□□ 1.01
NCKIPSD-206ENST00000439518 NETO1Q8TDF5 533 aa21.36■■□□□ 1.01
NCKIPSD-206ENST00000439518 MARK1Q9P0L2 795 aa21.36■■□□□ 1.01
NCKIPSD-206ENST00000439518 LSM7Q9UK45 103 aaKnown RBP21.36■■□□□ 1.01
NCKIPSD-206ENST00000439518 LOC105378220A0A1B0GUY1 285 aaPredicted RBP21.35■■□□□ 1.01
NCKIPSD-206ENST00000439518 TBC1D3BA6NDS4 549 aa21.35■■□□□ 1.01
NCKIPSD-206ENST00000439518 PPP1R3GB7ZBB8 358 aa21.35■■□□□ 1.01
NCKIPSD-206ENST00000439518 PMM2O15305 246 aa21.35■■□□□ 1.01
NCKIPSD-206ENST00000439518 GDF9O60383 454 aa21.35■■□□□ 1.01
NCKIPSD-206ENST00000439518 ADAM23O75077 832 aa21.35■■□□□ 1.01
NCKIPSD-206ENST00000439518 ZNF806P0C7X5 589 aa21.35■■□□□ 1.01
NCKIPSD-206ENST00000439518 PREPLQ4J6C6 727 aaPredicted RBP21.35■■□□□ 1.01
NCKIPSD-206ENST00000439518 FOXR2Q6PJQ5 311 aa21.35■■□□□ 1.01
NCKIPSD-206ENST00000439518 TADA2BQ86TJ2 420 aa21.35■■□□□ 1.01
NCKIPSD-206ENST00000439518 TTC30AQ86WT1 665 aa21.35■■□□□ 1.01
NCKIPSD-206ENST00000439518 UBR7Q8N806 425 aa21.35■■□□□ 1.01
NCKIPSD-206ENST00000439518 TERB1Q8NA31 727 aa21.35■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms