RNA–Protein interactions for RNA: ENST00000439120.1

AC004540.1-201, humanhuman

TSL 2 BASIC

Gene AC004540.1, Length 891 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-201ENST00000439120 DCLK1O15075 740 aa19.45■□□□□ 0.7
AC004540.1-201ENST00000439120 TBX18O95935 607 aa19.45■□□□□ 0.7
AC004540.1-201ENST00000439120 ZNF806P0C7X5 589 aa19.45■□□□□ 0.7
AC004540.1-201ENST00000439120 MPLP40238 635 aa19.45■□□□□ 0.7
AC004540.1-201ENST00000439120 PRCPP42785 496 aa19.45■□□□□ 0.7
AC004540.1-201ENST00000439120 TNFRSF4P43489 277 aa19.45■□□□□ 0.7
AC004540.1-201ENST00000439120 SLC8A3P57103 927 aa19.45■□□□□ 0.7
AC004540.1-201ENST00000439120 SF3A2Q15428 464 aaKnown RBP19.45■□□□□ 0.7
AC004540.1-201ENST00000439120 CRY1Q16526 586 aa19.45■□□□□ 0.7
AC004540.1-201ENST00000439120 IL31Q6EBC2 164 aa19.45■□□□□ 0.7
AC004540.1-201ENST00000439120 WHAMMQ8TF30 809 aa19.45■□□□□ 0.7
AC004540.1-201ENST00000439120 FAXDC2Q96IV6 333 aa19.45■□□□□ 0.7
AC004540.1-201ENST00000439120 DUSP9Q99956 384 aaKnown RBP19.45■□□□□ 0.7
AC004540.1-201ENST00000439120 GTPBP4Q9BZE4 634 aaKnown RBP19.45■□□□□ 0.7
AC004540.1-201ENST00000439120 DUSP15Q9H1R2 295 aaPredicted RBP19.45■□□□□ 0.7
AC004540.1-201ENST00000439120 POLMQ9NP87 494 aaPredicted RBP19.45■□□□□ 0.7
AC004540.1-201ENST00000439120 CISHQ9NSE2 258 aa19.45■□□□□ 0.7
AC004540.1-201ENST00000439120 BCCIPQ9P287 314 aaKnown RBP eCLIP19.45■□□□□ 0.7
AC004540.1-201ENST00000439120 NAGPAQ9UK23 515 aa19.45■□□□□ 0.7
AC004540.1-201ENST00000439120 CIZ1Q9ULV3 898 aaPredicted RBP19.45■□□□□ 0.7
AC004540.1-201ENST00000439120 INVSQ9Y283 1065 aa19.45■□□□□ 0.7
AC004540.1-201ENST00000439120 A0A1W2PQH9 124 aa19.44■□□□□ 0.7
AC004540.1-201ENST00000439120 HHLA1C9JL84 531 aa19.44■□□□□ 0.7
AC004540.1-201ENST00000439120 SLC16A3O15427 465 aaKnown RBP19.44■□□□□ 0.7
AC004540.1-201ENST00000439120 HOXC11O43248 304 aaPredicted RBP19.44■□□□□ 0.7
AC004540.1-201ENST00000439120 GDF9O60383 454 aa19.44■□□□□ 0.7
AC004540.1-201ENST00000439120 RARGP13631 454 aa19.44■□□□□ 0.7
AC004540.1-201ENST00000439120 PGFP49763 221 aa19.44■□□□□ 0.7
AC004540.1-201ENST00000439120 PSEN1P49768 467 aa19.44■□□□□ 0.7
AC004540.1-201ENST00000439120 STIM1Q13586 685 aa19.44■□□□□ 0.7
AC004540.1-201ENST00000439120 C10orf120Q5SQS8 335 aa19.44■□□□□ 0.7
AC004540.1-201ENST00000439120 PPP1R26Q5T8A7 1209 aaPredicted RBP19.44■□□□□ 0.7
AC004540.1-201ENST00000439120 HTR3DQ70Z44 454 aa19.44■□□□□ 0.7
AC004540.1-201ENST00000439120 TRMT11Q7Z4G4 463 aaKnown RBP19.44■□□□□ 0.7
AC004540.1-201ENST00000439120 TMEM25Q86YD3 366 aa19.44■□□□□ 0.7
AC004540.1-201ENST00000439120 SFTPA1Q8IWL2 248 aa19.44■□□□□ 0.7
AC004540.1-201ENST00000439120 IL17RCQ8NAC3 791 aa19.44■□□□□ 0.7
AC004540.1-201ENST00000439120 SEMA4DQ92854 862 aa19.44■□□□□ 0.7
AC004540.1-201ENST00000439120 CNOT6LQ96LI5 555 aaKnown RBP19.44■□□□□ 0.7
AC004540.1-201ENST00000439120 KLF16Q9BXK1 252 aaPredicted RBP19.44■□□□□ 0.7
AC004540.1-201ENST00000439120 DUSP16Q9BY84 665 aa19.44■□□□□ 0.7
AC004540.1-201ENST00000439120 VPS45Q9NRW7 570 aa19.44■□□□□ 0.7
AC004540.1-201ENST00000439120 DNMT3LQ9UJW3 386 aa19.44■□□□□ 0.7
AC004540.1-201ENST00000439120 NEDD8-MDP1E9PL57 170 aa19.43■□□□□ 0.7
AC004540.1-201ENST00000439120 TULP3O75386 442 aa19.43■□□□□ 0.7
AC004540.1-201ENST00000439120 RALAP11233 206 aa19.43■□□□□ 0.7
AC004540.1-201ENST00000439120 KCNA4P22459 653 aa19.43■□□□□ 0.7
AC004540.1-201ENST00000439120 FKBP3Q00688 224 aaKnown RBP19.43■□□□□ 0.7
AC004540.1-201ENST00000439120 CREB5Q02930 508 aa19.43■□□□□ 0.7
AC004540.1-201ENST00000439120 MESP2Q0VG99 397 aa19.43■□□□□ 0.7
AC004540.1-201ENST00000439120 C10orf76Q5T2E6 689 aa19.43■□□□□ 0.7
AC004540.1-201ENST00000439120 EMC10Q5UCC4 262 aa19.43■□□□□ 0.7
AC004540.1-201ENST00000439120 RASSF3Q86WH2 238 aa19.43■□□□□ 0.7
AC004540.1-201ENST00000439120 MDGA1Q8NFP4 955 aa19.43■□□□□ 0.7
AC004540.1-201ENST00000439120 WBP2Q969T9 261 aa19.43■□□□□ 0.7
AC004540.1-201ENST00000439120 TMEM176AQ96HP8 235 aa19.43■□□□□ 0.7
AC004540.1-201ENST00000439120 SPACA7Q96KW9 195 aa19.43■□□□□ 0.7
AC004540.1-201ENST00000439120 XPO6Q96QU8 1125 aaKnown RBP19.43■□□□□ 0.7
AC004540.1-201ENST00000439120 CDK5RAP1Q96SZ6 601 aaKnown RBP19.43■□□□□ 0.7
AC004540.1-201ENST00000439120 BBS2Q9BXC9 721 aa19.43■□□□□ 0.7
AC004540.1-201ENST00000439120 FAM124BQ9H5Z6 455 aaPredicted RBP19.43■□□□□ 0.7
AC004540.1-201ENST00000439120 MTPAPQ9NVV4 582 aaKnown RBP eCLIP19.43■□□□□ 0.7
AC004540.1-201ENST00000439120 OSER1Q9NX31 292 aa19.43■□□□□ 0.7
AC004540.1-201ENST00000439120 NUDT5Q9UKK9 219 aa19.43■□□□□ 0.7
AC004540.1-201ENST00000439120 A0A0A0MRY4 1105 aa19.42■□□□□ 0.7
AC004540.1-201ENST00000439120 ANTXRLA6NF34 631 aa19.42■□□□□ 0.7
AC004540.1-201ENST00000439120 SGK1O00141 431 aa19.42■□□□□ 0.7
AC004540.1-201ENST00000439120 PLA2G4AP47712 749 aa19.42■□□□□ 0.7
AC004540.1-201ENST00000439120 KIF11P52732 1056 aa19.42■□□□□ 0.7
AC004540.1-201ENST00000439120 LRRC63Q05C16 580 aa19.42■□□□□ 0.7
AC004540.1-201ENST00000439120 COBLL1Q53SF7 1204 aa19.42■□□□□ 0.7
AC004540.1-201ENST00000439120 GRAMD4Q6IC98 578 aa19.42■□□□□ 0.7
AC004540.1-201ENST00000439120 KLHDC10Q6PID8 442 aa19.42■□□□□ 0.7
AC004540.1-201ENST00000439120 CCDC186Q7Z3E2 898 aa19.42■□□□□ 0.7
AC004540.1-201ENST00000439120 ETFBKMTQ8IXQ9 262 aa19.42■□□□□ 0.7
AC004540.1-201ENST00000439120 PGBD3Q8N328 593 aa19.42■□□□□ 0.7
AC004540.1-201ENST00000439120 ZNF513Q8N8E2 541 aaPredicted RBP19.42■□□□□ 0.7
AC004540.1-201ENST00000439120 DDX1Q92499 740 aaKnown RBP19.42■□□□□ 0.7
AC004540.1-201ENST00000439120 ARID3AQ99856 593 aa19.42■□□□□ 0.7
AC004540.1-201ENST00000439120 NMUR1Q9HB89 426 aa19.42■□□□□ 0.7
AC004540.1-201ENST00000439120 DNAJC17Q9NVM6 304 aaKnown RBP19.42■□□□□ 0.7
AC004540.1-201ENST00000439120 WDR35Q9P2L0 1181 aa19.42■□□□□ 0.7
AC004540.1-201ENST00000439120 PSMA7O14818 248 aa19.41■□□□□ 0.7
AC004540.1-201ENST00000439120 MDM4O15151 490 aa19.41■□□□□ 0.7
AC004540.1-201ENST00000439120 KIR2DL1P43626 348 aaPredicted RBP19.41■□□□□ 0.7
AC004540.1-201ENST00000439120 RAD23BP54727 409 aa19.41■□□□□ 0.7
AC004540.1-201ENST00000439120 MCCD1P59942 119 aaPredicted RBP19.41■□□□□ 0.7
AC004540.1-201ENST00000439120 YWHAEP62258 255 aaKnown RBP19.41■□□□□ 0.7
AC004540.1-201ENST00000439120 PPM1JQ5JR12 505 aa19.41■□□□□ 0.7
AC004540.1-201ENST00000439120 PLA2G2CQ5R387 149 aa19.41■□□□□ 0.7
AC004540.1-201ENST00000439120 ANKRD40Q6AI12 368 aa19.41■□□□□ 0.7
AC004540.1-201ENST00000439120 TMEM92Q6UXU6 159 aa19.41■□□□□ 0.7
AC004540.1-201ENST00000439120 TPGS1Q6ZTW0 290 aa19.41■□□□□ 0.7
AC004540.1-201ENST00000439120 MIB1Q86YT6 1006 aa19.41■□□□□ 0.7
AC004540.1-201ENST00000439120 ARHGAP18Q8N392 663 aa19.41■□□□□ 0.7
AC004540.1-201ENST00000439120 PHTF2Q8N3S3 785 aa19.41■□□□□ 0.7
AC004540.1-201ENST00000439120 TERB1Q8NA31 727 aa19.41■□□□□ 0.7
AC004540.1-201ENST00000439120 SLC4A11Q8NBS3 891 aa19.41■□□□□ 0.7
AC004540.1-201ENST00000439120 KCNV2Q8TDN2 545 aa19.41■□□□□ 0.7
AC004540.1-201ENST00000439120 HMGB4Q8WW32 186 aa19.41■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms