RNA–Protein interactions for RNA: ENST00000438326.2

PMS2P3-206, Transcript of PMS1 homolog 2, mismatch repair system component pseudogene 3, humanhuman

TSL 5

Gene PMS2P3, Length 229 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS2P3-206ENST00000438326 CCSER2Q9H7U1 834 aa5.6□□□□□ -1.51
PMS2P3-206ENST00000438326 CSNK1G1Q9HCP0 422 aa5.6□□□□□ -1.51
PMS2P3-206ENST00000438326 PNPLA8Q9NP80 782 aa5.6□□□□□ -1.51
PMS2P3-206ENST00000438326 CYLDQ9NQC7 956 aa5.6□□□□□ -1.51
PMS2P3-206ENST00000438326 TLR8Q9NR97 1041 aaKnown RBP5.6□□□□□ -1.51
PMS2P3-206ENST00000438326 SPHK2Q9NRA0 654 aa5.6□□□□□ -1.51
PMS2P3-206ENST00000438326 KRT82Q9NSB4 513 aa5.6□□□□□ -1.51
PMS2P3-206ENST00000438326 TMEM74BQ9NUR3 256 aa5.6□□□□□ -1.51
PMS2P3-206ENST00000438326 DNAAF2Q9NVR5 837 aaKnown RBP5.6□□□□□ -1.51
PMS2P3-206ENST00000438326 GMIPQ9P107 970 aa5.6□□□□□ -1.51
PMS2P3-206ENST00000438326 CALCOCO1Q9P1Z2 691 aa5.6□□□□□ -1.51
PMS2P3-206ENST00000438326 NXF1Q9UBU9 619 aaKnown RBP5.6□□□□□ -1.51
PMS2P3-206ENST00000438326 SUSD2Q9UGT4 822 aa5.6□□□□□ -1.51
PMS2P3-206ENST00000438326 SLC6A14Q9UN76 642 aa5.6□□□□□ -1.51
PMS2P3-206ENST00000438326 MTMR6Q9Y217 621 aa5.6□□□□□ -1.51
PMS2P3-206ENST00000438326 MSRB2Q9Y3D2 182 aa5.6□□□□□ -1.51
PMS2P3-206ENST00000438326 NFE2L3Q9Y4A8 694 aa5.6□□□□□ -1.51
PMS2P3-206ENST00000438326 ASPMQ8IZT6 3477 aa5.6□□□□□ -1.51
PMS2P3-206ENST00000438326 ADAMTS20P59510 1910 aa5.6□□□□□ -1.51
PMS2P3-206ENST00000438326 PLXNB3Q9ULL4 1909 aa5.59□□□□□ -1.51
PMS2P3-206ENST00000438326 IGHV1OR15-9A0A0B4J2B8 117 aa5.59□□□□□ -1.51
PMS2P3-206ENST00000438326 PVALEFA0A1B0GWK0 134 aa5.59□□□□□ -1.51
PMS2P3-206ENST00000438326 A0A1W2PQD8 194 aa5.59□□□□□ -1.51
PMS2P3-206ENST00000438326 SRRM3A6NNA2 597 aaPredicted RBP5.59□□□□□ -1.51
PMS2P3-206ENST00000438326 ARHGAP33O14559 1287 aa5.59□□□□□ -1.51
PMS2P3-206ENST00000438326 NPC1O15118 1278 aa5.59□□□□□ -1.51
PMS2P3-206ENST00000438326 SPTLC2O15270 562 aa5.59□□□□□ -1.51
PMS2P3-206ENST00000438326 ZBTB24O43167 697 aaPredicted RBP5.59□□□□□ -1.51
PMS2P3-206ENST00000438326 STX6O43752 255 aa5.59□□□□□ -1.51
PMS2P3-206ENST00000438326 GREM1O60565 184 aa5.59□□□□□ -1.51
PMS2P3-206ENST00000438326 TLR5O60602 858 aa5.59□□□□□ -1.51
PMS2P3-206ENST00000438326 CUTAO60888 179 aa5.59□□□□□ -1.51
PMS2P3-206ENST00000438326 OPHN1O60890 802 aa5.59□□□□□ -1.51
PMS2P3-206ENST00000438326 PHACTR2O75167 634 aa5.59□□□□□ -1.51
PMS2P3-206ENST00000438326 AP1G2O75843 785 aa5.59□□□□□ -1.51
PMS2P3-206ENST00000438326 RPN1P04843 607 aaKnown RBP5.59□□□□□ -1.51
PMS2P3-206ENST00000438326 SYPP08247 313 aa5.59□□□□□ -1.51
PMS2P3-206ENST00000438326 NDUFV2P19404 249 aa5.59□□□□□ -1.51
PMS2P3-206ENST00000438326 TRIM21P19474 475 aaKnown RBP5.59□□□□□ -1.51
PMS2P3-206ENST00000438326 SPINK2P20155 84 aa5.59□□□□□ -1.51
PMS2P3-206ENST00000438326 RDXP35241 583 aaKnown RBP5.59□□□□□ -1.51
PMS2P3-206ENST00000438326 ZNF132P52740 706 aa5.59□□□□□ -1.51
PMS2P3-206ENST00000438326 ATXN3P54252 364 aaPredicted RBP5.59□□□□□ -1.51
PMS2P3-206ENST00000438326 SIM1P81133 766 aaPredicted RBP5.59□□□□□ -1.51
PMS2P3-206ENST00000438326 ZNF33AQ06730 810 aa5.59□□□□□ -1.51
PMS2P3-206ENST00000438326 INCA1Q0VD86 236 aa5.59□□□□□ -1.51
PMS2P3-206ENST00000438326 IFRD2Q12894 506 aaPredicted RBP5.59□□□□□ -1.51
PMS2P3-206ENST00000438326 BIRC3Q13489 604 aa5.59□□□□□ -1.51
PMS2P3-206ENST00000438326 NCOA4Q13772 614 aa5.59□□□□□ -1.51
PMS2P3-206ENST00000438326 E2F5Q15329 346 aa5.59□□□□□ -1.51
PMS2P3-206ENST00000438326 KNOP1Q1ED39 458 aaKnown RBP5.59□□□□□ -1.51
PMS2P3-206ENST00000438326 ANO4Q32M45 955 aa5.59□□□□□ -1.51
PMS2P3-206ENST00000438326 ZACNQ401N2 412 aa5.59□□□□□ -1.51
PMS2P3-206ENST00000438326 EMC10Q5UCC4 262 aa5.59□□□□□ -1.51
PMS2P3-206ENST00000438326 EGFLAMQ63HQ2 1017 aa5.59□□□□□ -1.51
PMS2P3-206ENST00000438326 GRAMD4Q6IC98 578 aa5.59□□□□□ -1.51
PMS2P3-206ENST00000438326 PAQR9Q6ZVX9 377 aa5.59□□□□□ -1.51
PMS2P3-206ENST00000438326 RAB44Q7Z6P3 723 aaPredicted RBP5.59□□□□□ -1.51
PMS2P3-206ENST00000438326 METTL3Q86U44 580 aaKnown RBP5.59□□□□□ -1.51
PMS2P3-206ENST00000438326 UNC93AQ86WB7 457 aa5.59□□□□□ -1.51
PMS2P3-206ENST00000438326 TMEM25Q86YD3 366 aa5.59□□□□□ -1.51
PMS2P3-206ENST00000438326 SLC9A9Q8IVB4 645 aa5.59□□□□□ -1.51
PMS2P3-206ENST00000438326 CHPFQ8IZ52 775 aa5.59□□□□□ -1.51
PMS2P3-206ENST00000438326 CRYBG2Q8N1P7 616 aa5.59□□□□□ -1.51
PMS2P3-206ENST00000438326 PGBD3Q8N328 593 aa5.59□□□□□ -1.51
PMS2P3-206ENST00000438326 ZNF276Q8N554 614 aa5.59□□□□□ -1.51
PMS2P3-206ENST00000438326 MINDY1Q8N5J2 469 aa5.59□□□□□ -1.51
PMS2P3-206ENST00000438326 FRMD1Q8N878 549 aa5.59□□□□□ -1.51
PMS2P3-206ENST00000438326 RDH13Q8NBN7 331 aa5.59□□□□□ -1.51
PMS2P3-206ENST00000438326 ZMIZ2Q8NF64 920 aa5.59□□□□□ -1.51
PMS2P3-206ENST00000438326 SCAMP5Q8TAC9 235 aa5.59□□□□□ -1.51
PMS2P3-206ENST00000438326 PARD3BQ8TEW8 1205 aa5.59□□□□□ -1.51
PMS2P3-206ENST00000438326 IPO4Q8TEX9 1081 aaKnown RBP5.59□□□□□ -1.51
PMS2P3-206ENST00000438326 ZNF516Q92618 1163 aa5.59□□□□□ -1.51
PMS2P3-206ENST00000438326 FOXJ1Q92949 421 aa5.59□□□□□ -1.51
PMS2P3-206ENST00000438326 DHX58Q96C10 678 aa5.59□□□□□ -1.51
PMS2P3-206ENST00000438326 HSPA12BQ96MM6 686 aa5.59□□□□□ -1.51
PMS2P3-206ENST00000438326 ZNF396Q96N95 335 aaPredicted RBP5.59□□□□□ -1.51
PMS2P3-206ENST00000438326 XPO6Q96QU8 1125 aaKnown RBP5.59□□□□□ -1.51
PMS2P3-206ENST00000438326 KCNK16Q96T55 309 aa5.59□□□□□ -1.51
PMS2P3-206ENST00000438326 MED10Q9BTT4 135 aa5.59□□□□□ -1.51
PMS2P3-206ENST00000438326 KLF16Q9BXK1 252 aaPredicted RBP5.59□□□□□ -1.51
PMS2P3-206ENST00000438326 BACH2Q9BYV9 841 aa5.59□□□□□ -1.51
PMS2P3-206ENST00000438326 PANK2Q9BZ23 570 aa5.59□□□□□ -1.51
PMS2P3-206ENST00000438326 ZDHHC5Q9C0B5 715 aa5.59□□□□□ -1.51
PMS2P3-206ENST00000438326 NACA2Q9H009 215 aa5.59□□□□□ -1.51
PMS2P3-206ENST00000438326 FAM124BQ9H5Z6 455 aaPredicted RBP5.59□□□□□ -1.51
PMS2P3-206ENST00000438326 UTP3Q9NQZ2 479 aaKnown RBP eCLIP5.59□□□□□ -1.517e-11■■■■■ 48.1
PMS2P3-206ENST00000438326 DNAJC17Q9NVM6 304 aaKnown RBP5.59□□□□□ -1.51
PMS2P3-206ENST00000438326 WDR35Q9P2L0 1181 aa5.59□□□□□ -1.51
PMS2P3-206ENST00000438326 TFIP11Q9UBB9 837 aaKnown RBP5.59□□□□□ -1.51
PMS2P3-206ENST00000438326 LSM7Q9UK45 103 aaKnown RBP5.59□□□□□ -1.51
PMS2P3-206ENST00000438326 HCN2Q9UL51 889 aa5.59□□□□□ -1.51
PMS2P3-206ENST00000438326 SCML2Q9UQR0 700 aa5.59□□□□□ -1.51
PMS2P3-206ENST00000438326 PCDHA5Q9Y5H7 936 aa5.59□□□□□ -1.51
PMS2P3-206ENST00000438326 TMEM131Q92545 1883 aa5.59□□□□□ -1.51
PMS2P3-206ENST00000438326 ITPR1Q14643 2758 aa5.59□□□□□ -1.52
PMS2P3-206ENST00000438326 WDFY3Q8IZQ1 3526 aa5.58□□□□□ -1.52
PMS2P3-206ENST00000438326 DSPP15924 2871 aaKnown RBP5.58□□□□□ -1.52
PMS2P3-206ENST00000438326 COL5A1P20908 1838 aaPredicted RBP5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms