RNA–Protein interactions for RNA: ENST00000436978.5

PTPN13-204, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS P4 TSL 5 BASIC

Gene PTPN13, Length 8,573 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-204ENST00000436978 WDR47O94967 919 aa16.34■□□□□ 0.21
PTPN13-204ENST00000436978 SEC23AQ15436 765 aa16.34■□□□□ 0.21
PTPN13-204ENST00000436978 NLNQ9BYT8 704 aa16.34■□□□□ 0.21
PTPN13-204ENST00000436978 PABPC3Q9H361 631 aaKnown RBP16.34■□□□□ 0.21
PTPN13-204ENST00000436978 RRAGCQ9HB90 399 aa16.34■□□□□ 0.21
PTPN13-204ENST00000436978 PXDNQ92626 1479 aa16.34■□□□□ 0.21
PTPN13-204ENST00000436978 HSD17B3P37058 310 aa16.34■□□□□ 0.21
PTPN13-204ENST00000436978 PLEKHM3Q6ZWE6 761 aa16.34■□□□□ 0.21
PTPN13-204ENST00000436978 CYP4Z1Q86W10 505 aa16.34■□□□□ 0.21
PTPN13-204ENST00000436978 OSMRQ99650 979 aa16.34■□□□□ 0.21
PTPN13-204ENST00000436978 LY6KQ17RY6 165 aa16.34■□□□□ 0.21
PTPN13-204ENST00000436978 CNDP1Q96KN2 507 aa16.34■□□□□ 0.21
PTPN13-204ENST00000436978 FDXACB1Q9BRP7 624 aaPredicted RBP16.34■□□□□ 0.21
PTPN13-204ENST00000436978 CCND1P24385 295 aa16.34■□□□□ 0.21
PTPN13-204ENST00000436978 CYP2F1P24903 491 aa16.34■□□□□ 0.21
PTPN13-204ENST00000436978 RRM2P31350 389 aa16.34■□□□□ 0.21
PTPN13-204ENST00000436978 CASP10Q92851 521 aa16.34■□□□□ 0.21
PTPN13-204ENST00000436978 SERPINB11Q96P15 392 aa16.34■□□□□ 0.21
PTPN13-204ENST00000436978 COL3A1P02461 1466 aaPredicted RBP16.34■□□□□ 0.21
PTPN13-204ENST00000436978 PLA2G6O60733 806 aa16.34■□□□□ 0.21
PTPN13-204ENST00000436978 RPN2P04844 631 aa16.34■□□□□ 0.21
PTPN13-204ENST00000436978 RUNX1T1Q06455 604 aa16.34■□□□□ 0.21
PTPN13-204ENST00000436978 CYLC2Q14093 348 aaPredicted RBP16.34■□□□□ 0.21
PTPN13-204ENST00000436978 DPF3Q92784 378 aa16.34■□□□□ 0.21
PTPN13-204ENST00000436978 BHMTQ93088 406 aa16.34■□□□□ 0.21
PTPN13-204ENST00000436978 VPS50Q96JG6 964 aa16.34■□□□□ 0.21
PTPN13-204ENST00000436978 ASB7Q9H672 318 aa16.33■□□□□ 0.21
PTPN13-204ENST00000436978 KANSL1LA0AUZ9 987 aa16.33■□□□□ 0.21
PTPN13-204ENST00000436978 MSCO60682 206 aa16.33■□□□□ 0.21
PTPN13-204ENST00000436978 ITIH4Q14624 930 aa16.33■□□□□ 0.21
PTPN13-204ENST00000436978 CYTH1Q15438 398 aa16.33■□□□□ 0.21
PTPN13-204ENST00000436978 SEZ6Q53EL9 994 aa16.33■□□□□ 0.21
PTPN13-204ENST00000436978 SERAC1Q96JX3 654 aa16.33■□□□□ 0.21
PTPN13-204ENST00000436978 IRX2Q9BZI1 471 aaPredicted RBP16.33■□□□□ 0.21
PTPN13-204ENST00000436978 TBKBP1A7MCY6 615 aa16.33■□□□□ 0.21
PTPN13-204ENST00000436978 ZNF839A8K0R7 811 aa16.33■□□□□ 0.21
PTPN13-204ENST00000436978 CSE1LP55060 971 aaKnown RBP16.33■□□□□ 0.21
PTPN13-204ENST00000436978 TTI2Q6NXR4 508 aa16.33■□□□□ 0.21
PTPN13-204ENST00000436978 BTN2A2Q8WVV5 523 aa16.33■□□□□ 0.21
PTPN13-204ENST00000436978 SPIRE2Q8WWL2 714 aa16.33■□□□□ 0.21
PTPN13-204ENST00000436978 DMAP1Q9NPF5 467 aaPredicted RBP16.33■□□□□ 0.21
PTPN13-204ENST00000436978 SOX13Q9UN79 622 aa16.33■□□□□ 0.21
PTPN13-204ENST00000436978 FBXO36Q8NEA4 188 aa16.33■□□□□ 0.2
PTPN13-204ENST00000436978 EPC1Q9H2F5 836 aa16.33■□□□□ 0.2
PTPN13-204ENST00000436978 F8W810 466 aa16.33■□□□□ 0.2
PTPN13-204ENST00000436978 CAND2O75155 1236 aa16.33■□□□□ 0.2
PTPN13-204ENST00000436978 CYP51A1Q16850 503 aa16.33■□□□□ 0.2
PTPN13-204ENST00000436978 STRA8Q7Z7C7 330 aa16.33■□□□□ 0.2
PTPN13-204ENST00000436978 ZIM3Q96PE6 472 aa16.33■□□□□ 0.2
PTPN13-204ENST00000436978 GANQ9H2C0 597 aa16.33■□□□□ 0.2
PTPN13-204ENST00000436978 ARMC7Q9H6L4 198 aa16.33■□□□□ 0.2
PTPN13-204ENST00000436978 SEPT3Q9UH03 358 aa16.33■□□□□ 0.2
PTPN13-204ENST00000436978 ANKRD6Q9Y2G4 727 aa16.33■□□□□ 0.2
PTPN13-204ENST00000436978 IFNA14P01570 189 aa16.33■□□□□ 0.2
PTPN13-204ENST00000436978 CXCL8P10145 99 aa16.33■□□□□ 0.2
PTPN13-204ENST00000436978 MSH3P20585 1137 aa16.33■□□□□ 0.2
PTPN13-204ENST00000436978 ERVK-9P63128 1117 aa16.33■□□□□ 0.2
PTPN13-204ENST00000436978 ERVK-24P63145 666 aa16.33■□□□□ 0.2
PTPN13-204ENST00000436978 OTUD4Q01804 1114 aaKnown RBP16.33■□□□□ 0.2
PTPN13-204ENST00000436978 GALNTL6Q49A17 601 aa16.33■□□□□ 0.2
PTPN13-204ENST00000436978 ZPBP2Q6X784 338 aa16.33■□□□□ 0.2
PTPN13-204ENST00000436978 CENPLQ8N0S6 344 aaPredicted RBP16.33■□□□□ 0.2
PTPN13-204ENST00000436978 TMEM86AQ8N2M4 240 aa16.33■□□□□ 0.2
PTPN13-204ENST00000436978 SNTG2Q9NY99 539 aa16.33■□□□□ 0.2
PTPN13-204ENST00000436978 FAM208AQ9UK61 1670 aaKnown RBP16.33■□□□□ 0.2
PTPN13-204ENST00000436978 PRR23AA6NEV1 266 aa16.33■□□□□ 0.2
PTPN13-204ENST00000436978 CABYRO75952 493 aa16.33■□□□□ 0.2
PTPN13-204ENST00000436978 PAEPP09466 180 aa16.33■□□□□ 0.2
PTPN13-204ENST00000436978 INSRRP14616 1297 aa16.33■□□□□ 0.2
PTPN13-204ENST00000436978 KCNJ1P48048 391 aa16.33■□□□□ 0.2
PTPN13-204ENST00000436978 TBX4P57082 545 aa16.33■□□□□ 0.2
PTPN13-204ENST00000436978 ORC1Q13415 861 aa16.33■□□□□ 0.2
PTPN13-204ENST00000436978 STARD3Q14849 445 aa16.33■□□□□ 0.2
PTPN13-204ENST00000436978 FSCN1Q16658 493 aaKnown RBP16.33■□□□□ 0.2
PTPN13-204ENST00000436978 IQSEC1Q6DN90 963 aa16.33■□□□□ 0.2
PTPN13-204ENST00000436978 CCDC60Q8IWA6 550 aaPredicted RBP16.33■□□□□ 0.2
PTPN13-204ENST00000436978 HNRNPLLQ8WVV9 542 aaKnown RBP16.33■□□□□ 0.2
PTPN13-204ENST00000436978 NT5MQ9NPB1 228 aa16.33■□□□□ 0.2
PTPN13-204ENST00000436978 TRPV2Q9Y5S1 764 aa16.33■□□□□ 0.2
PTPN13-204ENST00000436978 PYGMP11217 842 aa16.32■□□□□ 0.2
PTPN13-204ENST00000436978 KLRC2P26717 231 aa16.32■□□□□ 0.2
PTPN13-204ENST00000436978 DSG4Q86SJ6 1040 aa16.32■□□□□ 0.2
PTPN13-204ENST00000436978 ACSF2Q96CM8 615 aaPredicted RBP16.32■□□□□ 0.2
PTPN13-204ENST00000436978 SETD4Q9NVD3 440 aa16.32■□□□□ 0.2
PTPN13-204ENST00000436978 SLIT3O75094 1523 aa16.32■□□□□ 0.2
PTPN13-204ENST00000436978 SHMT1P34896 483 aa16.32■□□□□ 0.2
PTPN13-204ENST00000436978 MYL6P60660 151 aa16.32■□□□□ 0.2
PTPN13-204ENST00000436978 PLCL1Q15111 1095 aa16.32■□□□□ 0.2
PTPN13-204ENST00000436978 SEL1L3Q68CR1 1132 aa16.32■□□□□ 0.2
PTPN13-204ENST00000436978 SYT15Q9BQS2 421 aa16.32■□□□□ 0.2
PTPN13-204ENST00000436978 CYP2A7P20853 494 aa16.32■□□□□ 0.2
PTPN13-204ENST00000436978 KRT78Q8N1N4 520 aa16.32■□□□□ 0.2
PTPN13-204ENST00000436978 SH2D3CQ8N5H7 860 aa16.32■□□□□ 0.2
PTPN13-204ENST00000436978 UROC1Q96N76 676 aa16.32■□□□□ 0.2
PTPN13-204ENST00000436978 SEMA6BQ9H3T3 888 aa16.32■□□□□ 0.2
PTPN13-204ENST00000436978 XPNPEP3Q9NQH7 507 aa16.32■□□□□ 0.2
PTPN13-204ENST00000436978 TMEM39AQ9NV64 488 aa16.32■□□□□ 0.2
PTPN13-204ENST00000436978 FRMPD4Q14CM0 1322 aa16.32■□□□□ 0.2
PTPN13-204ENST00000436978 VGLL3A8MV65 326 aa16.32■□□□□ 0.2
PTPN13-204ENST00000436978 CYP2A6P11509 494 aaPredicted RBP16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms