RNA–Protein interactions for RNA: ENST00000436427.1

YBX1-203, Transcript of Y-box binding protein 1, humanhuman

TSL 1 (best)

Gene YBX1, Length 1,524 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1-203ENST00000436427 ATG2AQ2TAZ0 1938 aa22.34■■□□□ 1.17
YBX1-203ENST00000436427 GREB1Q4ZG55 1949 aa22.33■■□□□ 1.17
YBX1-203ENST00000436427 SPDYE4A6NLX3 237 aa22.33■■□□□ 1.17
YBX1-203ENST00000436427 DPYSL4O14531 572 aa22.33■■□□□ 1.17
YBX1-203ENST00000436427 NCK2O43639 380 aa22.33■■□□□ 1.17
YBX1-203ENST00000436427 C1RP00736 705 aa22.33■■□□□ 1.17
YBX1-203ENST00000436427 FYNP06241 537 aa22.33■■□□□ 1.17
YBX1-203ENST00000436427 HMGA1P17096 107 aaKnown RBP22.33■■□□□ 1.17
YBX1-203ENST00000436427 MAN1A1P33908 653 aa22.33■■□□□ 1.17
YBX1-203ENST00000436427 NOS2P35228 1153 aa22.33■■□□□ 1.17
YBX1-203ENST00000436427 SLC1A1P43005 524 aa22.33■■□□□ 1.17
YBX1-203ENST00000436427 PGFP49763 221 aa22.33■■□□□ 1.17
YBX1-203ENST00000436427 DNA2P51530 1060 aa22.33■■□□□ 1.17
YBX1-203ENST00000436427 MEI1Q5TIA1 1274 aa22.33■■□□□ 1.17
YBX1-203ENST00000436427 SYPL2Q5VXT5 272 aa22.33■■□□□ 1.17
YBX1-203ENST00000436427 DNAJB7Q7Z6W7 309 aaPredicted RBP22.33■■□□□ 1.17
YBX1-203ENST00000436427 SCD5Q86SK9 330 aa22.33■■□□□ 1.17
YBX1-203ENST00000436427 ELMOD1Q8N336 334 aa22.33■■□□□ 1.17
YBX1-203ENST00000436427 NIPA2Q8N8Q9 360 aa22.33■■□□□ 1.17
YBX1-203ENST00000436427 PSMG2Q969U7 264 aa22.33■■□□□ 1.17
YBX1-203ENST00000436427 DDX23Q9BUQ8 820 aaKnown RBP22.33■■□□□ 1.17
YBX1-203ENST00000436427 NMUR1Q9HB89 426 aa22.33■■□□□ 1.17
YBX1-203ENST00000436427 TLR8Q9NR97 1041 aaKnown RBP22.33■■□□□ 1.17
YBX1-203ENST00000436427 ABCC13Q9NSE7 274 aa22.33■■□□□ 1.17
YBX1-203ENST00000436427 STAP1Q9ULZ2 295 aa22.33■■□□□ 1.17
YBX1-203ENST00000436427 HCFC2Q9Y5Z7 792 aa22.33■■□□□ 1.17
YBX1-203ENST00000436427 FANCGO15287 622 aa22.32■■□□□ 1.16
YBX1-203ENST00000436427 RNF8O76064 485 aa22.32■■□□□ 1.16
YBX1-203ENST00000436427 ATP1A1P05023 1023 aaKnown RBP22.32■■□□□ 1.16
YBX1-203ENST00000436427 PTPN9P43378 593 aa22.32■■□□□ 1.16
YBX1-203ENST00000436427 SULT1E1P49888 294 aa22.32■■□□□ 1.16
YBX1-203ENST00000436427 FAM172AQ8WUF8 416 aa22.32■■□□□ 1.16
YBX1-203ENST00000436427 PPP2R3CQ969Q6 453 aa22.32■■□□□ 1.16
YBX1-203ENST00000436427 ZNF512Q96ME7 567 aaPredicted RBP22.32■■□□□ 1.16
YBX1-203ENST00000436427 DPP7Q9UHL4 492 aa22.32■■□□□ 1.16
YBX1-203ENST00000436427 ASB3Q9Y575 518 aa22.32■■□□□ 1.16
YBX1-203ENST00000436427 TRANK1O15050 2925 aa22.31■■□□□ 1.16
YBX1-203ENST00000436427 CCL16O15467 120 aa22.31■■□□□ 1.16
YBX1-203ENST00000436427 ACAP1Q15027 740 aa22.31■■□□□ 1.16
YBX1-203ENST00000436427 DUSP6Q16828 381 aa22.31■■□□□ 1.16
YBX1-203ENST00000436427 SLC25A52Q3SY17 297 aa22.31■■□□□ 1.16
YBX1-203ENST00000436427 SH3PXD2AQ5TCZ1 1133 aa22.31■■□□□ 1.16
YBX1-203ENST00000436427 CC2D1AQ6P1N0 951 aaPredicted RBP22.31■■□□□ 1.16
YBX1-203ENST00000436427 ELMSAN1Q6PJG2 1045 aa22.31■■□□□ 1.16
YBX1-203ENST00000436427 PDZD8Q8NEN9 1154 aa22.31■■□□□ 1.16
YBX1-203ENST00000436427 TRMT2BQ96GJ1 504 aaKnown RBP22.31■■□□□ 1.16
YBX1-203ENST00000436427 MYRFLQ96LU7 910 aa22.31■■□□□ 1.16
YBX1-203ENST00000436427 TBCBQ99426 244 aa22.31■■□□□ 1.16
YBX1-203ENST00000436427 OSER1Q9NX31 292 aa22.31■■□□□ 1.16
YBX1-203ENST00000436427 UXTQ9UBK9 157 aaPredicted RBP22.31■■□□□ 1.16
YBX1-203ENST00000436427 ZNF638Q14966 1978 aaKnown RBP22.31■■□□□ 1.16
YBX1-203ENST00000436427 DYNC1I1O14576 645 aa22.31■■□□□ 1.16
YBX1-203ENST00000436427 RFPL2O75678 378 aa22.31■■□□□ 1.16
YBX1-203ENST00000436427 ZMYND10O75800 440 aa22.31■■□□□ 1.16
YBX1-203ENST00000436427 TFE3P19532 575 aaPredicted RBP22.31■■□□□ 1.16
YBX1-203ENST00000436427 PSEN1P49768 467 aa22.31■■□□□ 1.16
YBX1-203ENST00000436427 RPS6KA1Q15418 735 aa22.31■■□□□ 1.16
YBX1-203ENST00000436427 RTL10Q7L3V2 364 aa22.31■■□□□ 1.16
YBX1-203ENST00000436427 RSRC2Q7L4I2 434 aaKnown RBP22.31■■□□□ 1.16
YBX1-203ENST00000436427 RNF139Q8WU17 664 aa22.31■■□□□ 1.16
YBX1-203ENST00000436427 MTCL1Q9Y4B5 1905 aaKnown RBP22.3■■□□□ 1.16
YBX1-203ENST00000436427 SYNJ2BP-COX16A0A087WUM0 186 aa22.3■■□□□ 1.16
YBX1-203ENST00000436427 RIOK3O14730 519 aaKnown RBP22.3■■□□□ 1.16
YBX1-203ENST00000436427 LRCH4O75427 683 aa22.3■■□□□ 1.16
YBX1-203ENST00000436427 GTF2F1P35269 517 aaKnown RBP eCLIP22.3■■□□□ 1.16
YBX1-203ENST00000436427 PITX1P78337 314 aaPredicted RBP22.3■■□□□ 1.16
YBX1-203ENST00000436427 BEND5Q7L4P6 421 aa22.3■■□□□ 1.16
YBX1-203ENST00000436427 ADAM32Q8TC27 787 aa22.3■■□□□ 1.16
YBX1-203ENST00000436427 HDAC7Q8WUI4 952 aa22.3■■□□□ 1.16
YBX1-203ENST00000436427 OVCA2Q8WZ82 227 aa22.3■■□□□ 1.16
YBX1-203ENST00000436427 NPY6RQ99463 290 aa22.3■■□□□ 1.16
YBX1-203ENST00000436427 TLR10Q9BXR5 811 aa22.3■■□□□ 1.16
YBX1-203ENST00000436427 PRDM12Q9H4Q4 367 aa22.3■■□□□ 1.16
YBX1-203ENST00000436427 IGFLR1Q9H665 355 aa22.3■■□□□ 1.16
YBX1-203ENST00000436427 FAM204AQ9H8W3 233 aa22.3■■□□□ 1.16
YBX1-203ENST00000436427 COX16Q9P0S2 106 aa22.3■■□□□ 1.16
YBX1-203ENST00000436427 MYO7AQ13402 2215 aa22.29■■□□□ 1.16
YBX1-203ENST00000436427 M0QYT0 321 aa22.29■■□□□ 1.16
YBX1-203ENST00000436427 RALAP11233 206 aa22.29■■□□□ 1.16
YBX1-203ENST00000436427 RARGP13631 454 aa22.29■■□□□ 1.16
YBX1-203ENST00000436427 GJC1P36383 396 aa22.29■■□□□ 1.16
YBX1-203ENST00000436427 TAS2R40P59535 323 aa22.29■■□□□ 1.16
YBX1-203ENST00000436427 RBM10P98175 930 aaKnown RBP22.29■■□□□ 1.16
YBX1-203ENST00000436427 NME3Q13232 169 aa22.29■■□□□ 1.16
YBX1-203ENST00000436427 RAB6CQ53S08 254 aa22.29■■□□□ 1.16
YBX1-203ENST00000436427 ZNF697Q5TEC3 545 aa22.29■■□□□ 1.16
YBX1-203ENST00000436427 ARFGAP1Q8N6T3 406 aa22.29■■□□□ 1.16
YBX1-203ENST00000436427 HES6Q96HZ4 224 aa22.29■■□□□ 1.16
YBX1-203ENST00000436427 PSMB7Q99436 277 aa22.29■■□□□ 1.16
YBX1-203ENST00000436427 CDCA3Q99618 268 aaPredicted RBP22.29■■□□□ 1.16
YBX1-203ENST00000436427 ADAM33Q9BZ11 813 aa22.29■■□□□ 1.16
YBX1-203ENST00000436427 RAB6CQ9H0N0 254 aa22.29■■□□□ 1.16
YBX1-203ENST00000436427 NSUN3Q9H649 340 aaKnown RBP22.29■■□□□ 1.16
YBX1-203ENST00000436427 RRN3Q9NYV6 651 aa22.29■■□□□ 1.16
YBX1-203ENST00000436427 CLIC5Q9NZA1 410 aa22.29■■□□□ 1.16
YBX1-203ENST00000436427 TRPM5Q9NZQ8 1165 aa22.29■■□□□ 1.16
YBX1-203ENST00000436427 NUDT5Q9UKK9 219 aa22.29■■□□□ 1.16
YBX1-203ENST00000436427 MIF4GDA9UHW6 222 aaKnown RBP22.28■■□□□ 1.16
YBX1-203ENST00000436427 ZDHHC11BP0C7U3 371 aa22.28■■□□□ 1.16
YBX1-203ENST00000436427 TCF4P15884 667 aa22.28■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms