RNA–Protein interactions for RNA: ENST00000435070.6

CPSF6-202, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF6, Length 6,616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-202ENST00000435070 AGTPBP1Q9UPW5 1226 aa7.72□□□□□ -1.17
CPSF6-202ENST00000435070 PSMD12O00232 456 aaPredicted RBP7.72□□□□□ -1.17
CPSF6-202ENST00000435070 DENRO43583 198 aaKnown RBP7.72□□□□□ -1.17
CPSF6-202ENST00000435070 SIN3BO75182 1162 aa7.72□□□□□ -1.17
CPSF6-202ENST00000435070 P4HA1P13674 534 aa7.72□□□□□ -1.17
CPSF6-202ENST00000435070 GAP43P17677 238 aa7.72□□□□□ -1.17
CPSF6-202ENST00000435070 BTDP43251 543 aa7.72□□□□□ -1.17
CPSF6-202ENST00000435070 NUDT2P50583 147 aa7.72□□□□□ -1.17
CPSF6-202ENST00000435070 XIAPP98170 497 aa7.72□□□□□ -1.17
CPSF6-202ENST00000435070 BNIP3Q12983 259 aa7.72□□□□□ -1.17
CPSF6-202ENST00000435070 QRICH1Q2TAL8 776 aa7.72□□□□□ -1.17
CPSF6-202ENST00000435070 PLEKHA7Q6IQ23 1121 aa7.72□□□□□ -1.17
CPSF6-202ENST00000435070 ADAM32Q8TC27 787 aa7.72□□□□□ -1.17
CPSF6-202ENST00000435070 CPT1BQ92523 772 aa7.72□□□□□ -1.17
CPSF6-202ENST00000435070 BEGAINQ9BUH8 593 aa7.72□□□□□ -1.17
CPSF6-202ENST00000435070 IMPG2Q9BZV3 1241 aa7.72□□□□□ -1.17
CPSF6-202ENST00000435070 A0A1W2PPW3 197 aa7.72□□□□□ -1.17
CPSF6-202ENST00000435070 DYTNA2CJ06 578 aa7.72□□□□□ -1.17
CPSF6-202ENST00000435070 CRCPO75575 148 aa7.72□□□□□ -1.17
CPSF6-202ENST00000435070 ENO3P13929 434 aaPredicted RBP7.72□□□□□ -1.17
CPSF6-202ENST00000435070 PTPN1P18031 435 aaKnown RBP7.72□□□□□ -1.17
CPSF6-202ENST00000435070 SERPINB5P36952 375 aa7.72□□□□□ -1.17
CPSF6-202ENST00000435070 GMPRP36959 345 aa7.72□□□□□ -1.17
CPSF6-202ENST00000435070 PHKA2P46019 1235 aa7.72□□□□□ -1.17
CPSF6-202ENST00000435070 GABPAQ06546 454 aa7.72□□□□□ -1.17
CPSF6-202ENST00000435070 CLEC16AQ2KHT3 1053 aa7.72□□□□□ -1.17
CPSF6-202ENST00000435070 GABPB2Q8TAK5 448 aaPredicted RBP7.72□□□□□ -1.17
CPSF6-202ENST00000435070 TFB1MQ8WVM0 346 aaKnown RBP7.72□□□□□ -1.17
CPSF6-202ENST00000435070 EPS15L1Q9UBC2 864 aa7.72□□□□□ -1.17
CPSF6-202ENST00000435070 KCPQ6ZWJ8 1503 aa7.72□□□□□ -1.17
CPSF6-202ENST00000435070 GOLGA8QA0A0J9YX86 632 aa7.72□□□□□ -1.17
CPSF6-202ENST00000435070 GOLGA8OA6NCC3 632 aa7.72□□□□□ -1.17
CPSF6-202ENST00000435070 GOLGA8NF8WBI6 632 aa7.72□□□□□ -1.17
CPSF6-202ENST00000435070 GNPATO15228 680 aa7.72□□□□□ -1.17
CPSF6-202ENST00000435070 MSH4O15457 936 aa7.72□□□□□ -1.17
CPSF6-202ENST00000435070 AP1G1O43747 822 aa7.72□□□□□ -1.17
CPSF6-202ENST00000435070 ZBED1O96006 694 aa7.72□□□□□ -1.17
CPSF6-202ENST00000435070 PEX3P56589 373 aa7.72□□□□□ -1.17
CPSF6-202ENST00000435070 KCNT1Q5JUK3 1230 aa7.72□□□□□ -1.17
CPSF6-202ENST00000435070 DCDC5Q6ZRR9 648 aa7.72□□□□□ -1.17
CPSF6-202ENST00000435070 FBXW8Q8N3Y1 598 aa7.72□□□□□ -1.17
CPSF6-202ENST00000435070 ACTL9Q8TC94 416 aa7.72□□□□□ -1.17
CPSF6-202ENST00000435070 LRRN4Q8WUT4 740 aa7.72□□□□□ -1.17
CPSF6-202ENST00000435070 PLEKHA8Q96JA3 519 aa7.72□□□□□ -1.17
CPSF6-202ENST00000435070 NT5C1BQ96P26 610 aa7.72□□□□□ -1.17
CPSF6-202ENST00000435070 CDRT15Q96T59 188 aa7.72□□□□□ -1.17
CPSF6-202ENST00000435070 GPRC5CQ9NQ84 441 aa7.72□□□□□ -1.17
CPSF6-202ENST00000435070 FAM32AQ9Y421 112 aaKnown RBP7.72□□□□□ -1.17
CPSF6-202ENST00000435070 SF3B1O75533 1304 aaKnown RBP eCLIP7.72□□□□□ -1.171e-6■■■■■ 28.3
CPSF6-202ENST00000435070 ARHGEF37A1IGU5 675 aa7.72□□□□□ -1.17
CPSF6-202ENST00000435070 CXorf49A8MYA2 514 aaPredicted RBP7.72□□□□□ -1.17
CPSF6-202ENST00000435070 STX16-NPEPL1H3BU86 382 aa7.72□□□□□ -1.17
CPSF6-202ENST00000435070 MCF2LO15068 1137 aa7.72□□□□□ -1.17
CPSF6-202ENST00000435070 CD48P09326 243 aa7.72□□□□□ -1.17
CPSF6-202ENST00000435070 PIM1P11309 404 aaPredicted RBP7.72□□□□□ -1.17
CPSF6-202ENST00000435070 XRCC1P18887 633 aaPredicted RBP7.72□□□□□ -1.17
CPSF6-202ENST00000435070 UGT1A6P19224 532 aa7.72□□□□□ -1.17
CPSF6-202ENST00000435070 UGT1A1P22309 533 aa7.72□□□□□ -1.17
CPSF6-202ENST00000435070 UGT1A4P22310 534 aa7.72□□□□□ -1.17
CPSF6-202ENST00000435070 UGT1A3P35503 534 aa7.72□□□□□ -1.17
CPSF6-202ENST00000435070 UGT1A5P35504 534 aa7.72□□□□□ -1.17
CPSF6-202ENST00000435070 CDK9P50750 372 aaKnown RBP7.72□□□□□ -1.17
CPSF6-202ENST00000435070 NUP107P57740 925 aa7.72□□□□□ -1.17
CPSF6-202ENST00000435070 KBTBD6Q86V97 674 aa7.72□□□□□ -1.17
CPSF6-202ENST00000435070 LILRA2Q8N149 483 aa7.72□□□□□ -1.17
CPSF6-202ENST00000435070 SHC3Q92529 594 aa7.72□□□□□ -1.17
CPSF6-202ENST00000435070 DMAC2Q9NW81 257 aa7.72□□□□□ -1.17
CPSF6-202ENST00000435070 CNTN3Q9P232 1028 aa7.72□□□□□ -1.17
CPSF6-202ENST00000435070 SHOC2Q9UQ13 582 aa7.72□□□□□ -1.17
CPSF6-202ENST00000435070 ATRNL1Q5VV63 1379 aa7.71□□□□□ -1.17
CPSF6-202ENST00000435070 SDR42E2A6NKP2 422 aa7.71□□□□□ -1.17
CPSF6-202ENST00000435070 A6NL46 340 aa7.71□□□□□ -1.17
CPSF6-202ENST00000435070 MAP3K6O95382 1288 aa7.71□□□□□ -1.17
CPSF6-202ENST00000435070 IDO1P14902 403 aa7.71□□□□□ -1.17
CPSF6-202ENST00000435070 EIF2AK2P19525 551 aaKnown RBP7.71□□□□□ -1.17
CPSF6-202ENST00000435070 PSMC5P62195 406 aa7.71□□□□□ -1.17
CPSF6-202ENST00000435070 GNA12Q03113 381 aa7.71□□□□□ -1.17
CPSF6-202ENST00000435070 LDLRAP1Q5SW96 308 aa7.71□□□□□ -1.17
CPSF6-202ENST00000435070 FAM71DQ8N9W8 422 aa7.71□□□□□ -1.17
CPSF6-202ENST00000435070 ACTRT2Q8TDY3 377 aa7.71□□□□□ -1.17
CPSF6-202ENST00000435070 C12orf43Q96C57 262 aaKnown RBP7.71□□□□□ -1.17
CPSF6-202ENST00000435070 PGBD4Q96DM1 585 aa7.71□□□□□ -1.17
CPSF6-202ENST00000435070 SNX27Q96L92 541 aa7.71□□□□□ -1.17
CPSF6-202ENST00000435070 TMEM79Q9BSE2 394 aa7.71□□□□□ -1.17
CPSF6-202ENST00000435070 HAUS8Q9BT25 410 aa7.71□□□□□ -1.17
CPSF6-202ENST00000435070 ZNF696Q9H7X3 374 aa7.71□□□□□ -1.17
CPSF6-202ENST00000435070 F8VP50 259 aa7.71□□□□□ -1.17
CPSF6-202ENST00000435070 ZBTB5O15062 677 aa7.71□□□□□ -1.17
CPSF6-202ENST00000435070 KDM1AO60341 852 aa7.71□□□□□ -1.17
CPSF6-202ENST00000435070 EPHA3P29320 983 aa7.71□□□□□ -1.17
CPSF6-202ENST00000435070 RPL22P35268 128 aaKnown RBP7.71□□□□□ -1.17
CPSF6-202ENST00000435070 CARTPTQ16568 116 aa7.71□□□□□ -1.17
CPSF6-202ENST00000435070 EML3Q32P44 896 aa7.71□□□□□ -1.17
CPSF6-202ENST00000435070 ASPRV1Q53RT3 343 aa7.71□□□□□ -1.17
CPSF6-202ENST00000435070 PDPK2PQ6A1A2 396 aa7.71□□□□□ -1.17
CPSF6-202ENST00000435070 NANOGP8Q6NSW7 305 aa7.71□□□□□ -1.17
CPSF6-202ENST00000435070 USP37Q86T82 979 aa7.71□□□□□ -1.17
CPSF6-202ENST00000435070 SSU72Q9NP77 194 aaKnown RBP7.71□□□□□ -1.17
CPSF6-202ENST00000435070 MTMR4Q9NYA4 1195 aa7.71□□□□□ -1.17
CPSF6-202ENST00000435070 SCINQ9Y6U3 715 aa7.71□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms