RNA–Protein interactions for RNA: ENST00000434667.3

SCAF4-203, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF4, Length 3,846 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-203ENST00000434667 IWS1Q96ST2 819 aa10.86□□□□□ -0.67
SCAF4-203ENST00000434667 CNTN3Q9P232 1028 aa10.86□□□□□ -0.67
SCAF4-203ENST00000434667 AGO2Q9UKV8 859 aaKnown RBP10.86□□□□□ -0.67
SCAF4-203ENST00000434667 GINS2Q9Y248 185 aa10.86□□□□□ -0.67
SCAF4-203ENST00000434667 SYNJ2BP-COX16A0A087WUM0 186 aa10.86□□□□□ -0.67
SCAF4-203ENST00000434667 GOLGA8QA0A0J9YX86 632 aa10.86□□□□□ -0.67
SCAF4-203ENST00000434667 GOLGA8OA6NCC3 632 aa10.86□□□□□ -0.67
SCAF4-203ENST00000434667 GOLGA8NF8WBI6 632 aa10.86□□□□□ -0.67
SCAF4-203ENST00000434667 ARL1P40616 181 aaPredicted RBP10.86□□□□□ -0.67
SCAF4-203ENST00000434667 BPIFB4P59827 614 aa10.86□□□□□ -0.67
SCAF4-203ENST00000434667 OLIG2Q13516 323 aa10.86□□□□□ -0.67
SCAF4-203ENST00000434667 PTPN20Q4JDL3 420 aa10.86□□□□□ -0.67
SCAF4-203ENST00000434667 DEFB107AQ8IZN7 70 aa10.86□□□□□ -0.67
SCAF4-203ENST00000434667 TMEM174Q8WUU8 243 aa10.86□□□□□ -0.67
SCAF4-203ENST00000434667 NAT14Q8WUY8 206 aa10.86□□□□□ -0.67
SCAF4-203ENST00000434667 CNBD2Q96M20 576 aa10.86□□□□□ -0.67
SCAF4-203ENST00000434667 RIT2Q99578 217 aa10.86□□□□□ -0.67
SCAF4-203ENST00000434667 KLHL4Q9C0H6 718 aa10.86□□□□□ -0.67
SCAF4-203ENST00000434667 RNPEPQ9H4A4 650 aa10.86□□□□□ -0.67
SCAF4-203ENST00000434667 VCX3AQ9NNX9 186 aa10.86□□□□□ -0.67
SCAF4-203ENST00000434667 STK32BQ9NY57 414 aa10.86□□□□□ -0.67
SCAF4-203ENST00000434667 COX16Q9P0S2 106 aa10.86□□□□□ -0.67
SCAF4-203ENST00000434667 PDP2Q9P2J9 529 aa10.86□□□□□ -0.67
SCAF4-203ENST00000434667 TXNDC16Q9P2K2 825 aa10.86□□□□□ -0.67
SCAF4-203ENST00000434667 TAGLN3Q9UI15 199 aa10.86□□□□□ -0.67
SCAF4-203ENST00000434667 CCDC78A2IDD5 438 aa10.85□□□□□ -0.67
SCAF4-203ENST00000434667 NOP56O00567 594 aaKnown RBP10.85□□□□□ -0.67
SCAF4-203ENST00000434667 TM9SF1O15321 606 aa10.85□□□□□ -0.67
SCAF4-203ENST00000434667 GSTA2P09210 222 aa10.85□□□□□ -0.67
SCAF4-203ENST00000434667 DHRS4L1P0CG22 281 aa10.85□□□□□ -0.67
SCAF4-203ENST00000434667 VAV1P15498 845 aa10.85□□□□□ -0.67
SCAF4-203ENST00000434667 VCLP18206 1134 aa10.85□□□□□ -0.67
SCAF4-203ENST00000434667 PCSK6P29122 969 aa10.85□□□□□ -0.67
SCAF4-203ENST00000434667 LMNB2Q03252 620 aa10.85□□□□□ -0.67
SCAF4-203ENST00000434667 MYBPC2Q14324 1141 aa10.85□□□□□ -0.67
SCAF4-203ENST00000434667 AZIN2Q96A70 460 aa10.85□□□□□ -0.67
SCAF4-203ENST00000434667 HIC2Q96JB3 615 aa10.85□□□□□ -0.67
SCAF4-203ENST00000434667 PPP1R16BQ96T49 567 aa10.85□□□□□ -0.67
SCAF4-203ENST00000434667 DHRS4Q9BTZ2 278 aa10.85□□□□□ -0.67
SCAF4-203ENST00000434667 DMAP1Q9NPF5 467 aaPredicted RBP10.85□□□□□ -0.67
SCAF4-203ENST00000434667 TDRKHQ9Y2W6 561 aaKnown RBP10.85□□□□□ -0.67
SCAF4-203ENST00000434667 HMX2A2RU54 273 aa10.85□□□□□ -0.67
SCAF4-203ENST00000434667 SPDYE2BA6NHP3 402 aa10.85□□□□□ -0.67
SCAF4-203ENST00000434667 E9PBE3 544 aa10.85□□□□□ -0.67
SCAF4-203ENST00000434667 POLRMTO00411 1230 aaKnown RBP10.85□□□□□ -0.67
SCAF4-203ENST00000434667 KLHL41O60662 606 aa10.85□□□□□ -0.67
SCAF4-203ENST00000434667 ITGAVP06756 1048 aa10.85□□□□□ -0.67
SCAF4-203ENST00000434667 SPDYE6P0CI01 402 aa10.85□□□□□ -0.67
SCAF4-203ENST00000434667 CCR10P46092 362 aa10.85□□□□□ -0.67
SCAF4-203ENST00000434667 MED21Q13503 144 aa10.85□□□□□ -0.67
SCAF4-203ENST00000434667 PDK1Q15118 436 aa10.85□□□□□ -0.67
SCAF4-203ENST00000434667 DLGAP5Q15398 846 aa10.85□□□□□ -0.67
SCAF4-203ENST00000434667 KLHL38Q2WGJ6 581 aa10.85□□□□□ -0.67
SCAF4-203ENST00000434667 SPDYE2Q495Y8 402 aa10.85□□□□□ -0.67
SCAF4-203ENST00000434667 ZC3H12AQ5D1E8 599 aaKnown RBP10.85□□□□□ -0.67
SCAF4-203ENST00000434667 CCDC60Q8IWA6 550 aaPredicted RBP10.85□□□□□ -0.67
SCAF4-203ENST00000434667 SP8Q8IXZ3 490 aa10.85□□□□□ -0.67
SCAF4-203ENST00000434667 ARHGAP24Q8N264 748 aa10.85□□□□□ -0.67
SCAF4-203ENST00000434667 FAM156AQ8NDB6 213 aa10.85□□□□□ -0.67
SCAF4-203ENST00000434667 GRIN3AQ8TCU5 1115 aa10.85□□□□□ -0.67
SCAF4-203ENST00000434667 SLC44A1Q8WWI5 657 aa10.85□□□□□ -0.67
SCAF4-203ENST00000434667 MARK4Q96L34 752 aa10.85□□□□□ -0.67
SCAF4-203ENST00000434667 RMDN3Q96TC7 470 aa10.85□□□□□ -0.67
SCAF4-203ENST00000434667 CCDC106Q9BWC9 280 aa10.85□□□□□ -0.67
SCAF4-203ENST00000434667 S100A14Q9HCY8 104 aa10.85□□□□□ -0.67
SCAF4-203ENST00000434667 UBAP1Q9NZ09 502 aa10.85□□□□□ -0.67
SCAF4-203ENST00000434667 HSFX1Q9UBD0 423 aa10.85□□□□□ -0.67
SCAF4-203ENST00000434667 EXOC7Q9UPT5 735 aa10.85□□□□□ -0.67
SCAF4-203ENST00000434667 RIPK3Q9Y572 518 aa10.85□□□□□ -0.67
SCAF4-203ENST00000434667 IQANK1A0A1B0GTG1 560 aa10.85□□□□□ -0.67
SCAF4-203ENST00000434667 ABLIM1O14639 778 aa10.85□□□□□ -0.67
SCAF4-203ENST00000434667 KCNN4O15554 427 aa10.85□□□□□ -0.67
SCAF4-203ENST00000434667 GALK1P51570 392 aa10.85□□□□□ -0.67
SCAF4-203ENST00000434667 HIC1Q14526 733 aa10.85□□□□□ -0.67
SCAF4-203ENST00000434667 CIAPIN1Q6FI81 312 aa10.85□□□□□ -0.67
SCAF4-203ENST00000434667 TRIM74Q86UV6 250 aa10.85□□□□□ -0.67
SCAF4-203ENST00000434667 TRIM73Q86UV7 250 aa10.85□□□□□ -0.67
SCAF4-203ENST00000434667 UBA3Q8TBC4 463 aa10.85□□□□□ -0.67
SCAF4-203ENST00000434667 FAM81BQ96LP2 452 aa10.85□□□□□ -0.67
SCAF4-203ENST00000434667 PEBP4Q96S96 227 aa10.85□□□□□ -0.67
SCAF4-203ENST00000434667 ZNF341Q9BYN7 854 aa10.85□□□□□ -0.67
SCAF4-203ENST00000434667 UNKQ9C0B0 810 aaKnown RBP10.85□□□□□ -0.67
SCAF4-203ENST00000434667 RNF19AQ9NV58 838 aa10.85□□□□□ -0.67
SCAF4-203ENST00000434667 ZC3H7BQ9UGR2 993 aaKnown RBP10.85□□□□□ -0.67
SCAF4-203ENST00000434667 HMGXB4Q9UGU5 601 aa10.85□□□□□ -0.67
SCAF4-203ENST00000434667 RFPL1O75677 317 aa10.84□□□□□ -0.67
SCAF4-203ENST00000434667 SEC24DO94855 1032 aaPredicted RBP10.84□□□□□ -0.67
SCAF4-203ENST00000434667 KDELR1P24390 212 aa10.84□□□□□ -0.67
SCAF4-203ENST00000434667 CPOXP36551 454 aa10.84□□□□□ -0.67
SCAF4-203ENST00000434667 TFAMQ00059 246 aaKnown RBP10.84□□□□□ -0.67
SCAF4-203ENST00000434667 PDK3Q15120 406 aa10.84□□□□□ -0.67
SCAF4-203ENST00000434667 TLR1Q15399 786 aa10.84□□□□□ -0.67
SCAF4-203ENST00000434667 MAVSQ7Z434 540 aa10.84□□□□□ -0.67
SCAF4-203ENST00000434667 DHDDSQ86SQ9 333 aa10.84□□□□□ -0.67
SCAF4-203ENST00000434667 TNS4Q8IZW8 715 aa10.84□□□□□ -0.67
SCAF4-203ENST00000434667 METTL25Q8N6Q8 603 aa10.84□□□□□ -0.67
SCAF4-203ENST00000434667 DDX51Q8N8A6 666 aaKnown RBP eCLIP10.84□□□□□ -0.679e-7■■■□□ 16.3
SCAF4-203ENST00000434667 ZNF513Q8N8E2 541 aaPredicted RBP10.84□□□□□ -0.67
SCAF4-203ENST00000434667 SYTL5Q8TDW5 730 aaPredicted RBP10.84□□□□□ -0.67
SCAF4-203ENST00000434667 CLEC4DQ8WXI8 215 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms