RNA–Protein interactions for RNA: ENST00000434376.6

SCARF1-203, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 3,342 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-203ENST00000434376 ARL4CP56559 192 aa16.2■□□□□ 0.18
SCARF1-203ENST00000434376 MAP3K7CLP57077 242 aa16.2■□□□□ 0.18
SCARF1-203ENST00000434376 KBTBD12Q3ZCT8 623 aa16.2■□□□□ 0.18
SCARF1-203ENST00000434376 MROH9Q5TGP6 573 aa16.2■□□□□ 0.18
SCARF1-203ENST00000434376 DENND5BQ6ZUT9 1274 aa16.2■□□□□ 0.18
SCARF1-203ENST00000434376 KCNH4Q9UQ05 1017 aa16.2■□□□□ 0.18
SCARF1-203ENST00000434376 MYO7AQ13402 2215 aa16.2■□□□□ 0.18
SCARF1-203ENST00000434376 TRIP11Q15643 1979 aa16.19■□□□□ 0.18
SCARF1-203ENST00000434376 CSPG5O95196 566 aa16.19■□□□□ 0.18
SCARF1-203ENST00000434376 LSM8O95777 96 aaKnown RBP16.19■□□□□ 0.18
SCARF1-203ENST00000434376 POMCP01189 267 aa16.19■□□□□ 0.18
SCARF1-203ENST00000434376 GBP1P32455 592 aa16.19■□□□□ 0.18
SCARF1-203ENST00000434376 SOWAHAQ2M3V2 549 aa16.19■□□□□ 0.18
SCARF1-203ENST00000434376 PLEKHH3Q7Z736 793 aa16.19■□□□□ 0.18
SCARF1-203ENST00000434376 PRPF39Q86UA1 669 aaKnown RBP16.19■□□□□ 0.18
SCARF1-203ENST00000434376 EIF1ADQ8N9N8 165 aaKnown RBP16.19■□□□□ 0.18
SCARF1-203ENST00000434376 AGR3Q8TD06 166 aa16.19■□□□□ 0.18
SCARF1-203ENST00000434376 KHSRPQ92945 711 aaKnown RBP eCLIP16.19■□□□□ 0.18
SCARF1-203ENST00000434376 RNF34Q969K3 372 aa16.19■□□□□ 0.18
SCARF1-203ENST00000434376 GAD1Q99259 594 aa16.19■□□□□ 0.18
SCARF1-203ENST00000434376 MECRQ9BV79 373 aa16.19■□□□□ 0.18
SCARF1-203ENST00000434376 UNKQ9C0B0 810 aaKnown RBP16.19■□□□□ 0.18
SCARF1-203ENST00000434376 ZNF395Q9H8N7 513 aaPredicted RBP16.19■□□□□ 0.18
SCARF1-203ENST00000434376 HAO1Q9UJM8 370 aa16.19■□□□□ 0.18
SCARF1-203ENST00000434376 MAGEB2O15479 319 aa16.19■□□□□ 0.18
SCARF1-203ENST00000434376 MCF2P10911 925 aa16.19■□□□□ 0.18
SCARF1-203ENST00000434376 VDRP11473 427 aa16.19■□□□□ 0.18
SCARF1-203ENST00000434376 HOXA11P31270 313 aaPredicted RBP16.19■□□□□ 0.18
SCARF1-203ENST00000434376 CCDC14Q49A88 953 aa16.19■□□□□ 0.18
SCARF1-203ENST00000434376 WSCD1Q658N2 575 aa16.19■□□□□ 0.18
SCARF1-203ENST00000434376 ZCCHC9Q8N567 271 aaKnown RBP16.19■□□□□ 0.18
SCARF1-203ENST00000434376 CCDC185Q8N715 623 aa16.19■□□□□ 0.18
SCARF1-203ENST00000434376 LRRC8CQ8TDW0 803 aa16.19■□□□□ 0.18
SCARF1-203ENST00000434376 USP33Q8TEY7 942 aa16.19■□□□□ 0.18
SCARF1-203ENST00000434376 ERP27Q96DN0 273 aa16.19■□□□□ 0.18
SCARF1-203ENST00000434376 FAM111AQ96PZ2 611 aa16.19■□□□□ 0.18
SCARF1-203ENST00000434376 PAAF1Q9BRP4 392 aa16.19■□□□□ 0.18
SCARF1-203ENST00000434376 SMIM24O75264 130 aa16.19■□□□□ 0.18
SCARF1-203ENST00000434376 BEST1O76090 585 aa16.19■□□□□ 0.18
SCARF1-203ENST00000434376 INHBAP08476 426 aa16.19■□□□□ 0.18
SCARF1-203ENST00000434376 GOT1P17174 413 aa16.19■□□□□ 0.18
SCARF1-203ENST00000434376 ABCD1P33897 745 aa16.19■□□□□ 0.18
SCARF1-203ENST00000434376 GPX6P59796 221 aa16.19■□□□□ 0.18
SCARF1-203ENST00000434376 LMNB2Q03252 620 aa16.19■□□□□ 0.18
SCARF1-203ENST00000434376 USP6NLQ92738 828 aa16.19■□□□□ 0.18
SCARF1-203ENST00000434376 SERPINB12Q96P63 405 aa16.19■□□□□ 0.18
SCARF1-203ENST00000434376 KCNK16Q96T55 309 aa16.19■□□□□ 0.18
SCARF1-203ENST00000434376 AP1G2O75843 785 aa16.18■□□□□ 0.18
SCARF1-203ENST00000434376 MXRA7P84157 204 aa16.18■□□□□ 0.18
SCARF1-203ENST00000434376 DPYSL3Q14195 570 aa16.18■□□□□ 0.18
SCARF1-203ENST00000434376 OASLQ15646 514 aaKnown RBP16.18■□□□□ 0.18
SCARF1-203ENST00000434376 RNASEH2BQ5TBB1 312 aaKnown RBP16.18■□□□□ 0.18
SCARF1-203ENST00000434376 LONP2Q86WA8 852 aa16.18■□□□□ 0.18
SCARF1-203ENST00000434376 C2orf69Q8N8R5 385 aa16.18■□□□□ 0.18
SCARF1-203ENST00000434376 BEST2Q8NFU1 509 aa16.18■□□□□ 0.18
SCARF1-203ENST00000434376 PPTC7Q8NI37 304 aa16.18■□□□□ 0.18
SCARF1-203ENST00000434376 IQCGQ9H095 443 aaKnown RBP16.18■□□□□ 0.18
SCARF1-203ENST00000434376 FAM47DPA6NHR8 397 aa16.18■□□□□ 0.18
SCARF1-203ENST00000434376 BHMG1C9JSJ3 638 aaPredicted RBP16.18■□□□□ 0.18
SCARF1-203ENST00000434376 GSTA1P08263 222 aa16.18■□□□□ 0.18
SCARF1-203ENST00000434376 PROZP22891 400 aa16.18■□□□□ 0.18
SCARF1-203ENST00000434376 MLH1P40692 756 aa16.18■□□□□ 0.18
SCARF1-203ENST00000434376 FAAP100Q0VG06 881 aa16.18■□□□□ 0.18
SCARF1-203ENST00000434376 SETDB1Q15047 1291 aa16.18■□□□□ 0.18
SCARF1-203ENST00000434376 CCDC6Q16204 474 aa16.18■□□□□ 0.18
SCARF1-203ENST00000434376 ZNF792Q3KQV3 632 aa16.18■□□□□ 0.18
SCARF1-203ENST00000434376 ARRDC4Q8NCT1 418 aa16.18■□□□□ 0.18
SCARF1-203ENST00000434376 DDX56Q9NY93 547 aaKnown RBP16.18■□□□□ 0.18
SCARF1-203ENST00000434376 ARL2BPQ9Y2Y0 163 aa16.18■□□□□ 0.18
SCARF1-203ENST00000434376 DOCK1Q14185 1865 aa16.18■□□□□ 0.18
SCARF1-203ENST00000434376 UNC80Q8N2C7 3258 aa16.18■□□□□ 0.18
SCARF1-203ENST00000434376 CCND1P24385 295 aa16.17■□□□□ 0.18
SCARF1-203ENST00000434376 ZBTB16Q05516 673 aa16.17■□□□□ 0.18
SCARF1-203ENST00000434376 ARHGEF18Q6ZSZ5 1173 aa16.17■□□□□ 0.18
SCARF1-203ENST00000434376 MAGEC3Q8TD91 643 aa16.17■□□□□ 0.18
SCARF1-203ENST00000434376 CENPTQ96BT3 561 aa16.17■□□□□ 0.18
SCARF1-203ENST00000434376 CNPY3Q9BT09 278 aa16.17■□□□□ 0.18
SCARF1-203ENST00000434376 EBF2Q9HAK2 575 aa16.17■□□□□ 0.18
SCARF1-203ENST00000434376 LRRC4Q9HBW1 653 aa16.17■□□□□ 0.18
SCARF1-203ENST00000434376 ZMYND8Q9ULU4 1186 aaPredicted RBP16.17■□□□□ 0.18
SCARF1-203ENST00000434376 RLFQ13129 1914 aa16.17■□□□□ 0.18
SCARF1-203ENST00000434376 CLUHO75153 1309 aa16.17■□□□□ 0.18
SCARF1-203ENST00000434376 MYADML2A6NDP7 307 aa16.17■□□□□ 0.18
SCARF1-203ENST00000434376 HUS1O60921 280 aa16.17■□□□□ 0.18
SCARF1-203ENST00000434376 MT-ND3P03897 115 aa16.17■□□□□ 0.18
SCARF1-203ENST00000434376 PYGBP11216 843 aa16.17■□□□□ 0.18
SCARF1-203ENST00000434376 CPA2P48052 419 aa16.17■□□□□ 0.18
SCARF1-203ENST00000434376 SLC8A3P57103 927 aa16.17■□□□□ 0.18
SCARF1-203ENST00000434376 IL9RQ01113 521 aa16.17■□□□□ 0.18
SCARF1-203ENST00000434376 FBXO47Q5MNV8 452 aa16.17■□□□□ 0.18
SCARF1-203ENST00000434376 AP1ARQ63HQ0 302 aa16.17■□□□□ 0.18
SCARF1-203ENST00000434376 IL31Q6EBC2 164 aa16.17■□□□□ 0.18
SCARF1-203ENST00000434376 MAMDC4Q6UXC1 1216 aa16.17■□□□□ 0.18
SCARF1-203ENST00000434376 ZCCHC23Q6ZST2 131 aa16.17■□□□□ 0.18
SCARF1-203ENST00000434376 HFE2Q6ZVN8 426 aa16.17■□□□□ 0.18
SCARF1-203ENST00000434376 DEFB106AQ8N104 65 aa16.17■□□□□ 0.18
SCARF1-203ENST00000434376 MPP5Q8N3R9 675 aa16.17■□□□□ 0.18
SCARF1-203ENST00000434376 PCDH19Q8TAB3 1148 aa16.17■□□□□ 0.18
SCARF1-203ENST00000434376 CCHCR1Q8TD31 782 aa16.17■□□□□ 0.18
SCARF1-203ENST00000434376 TCP10LQ8TDR4 215 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms