RNA–Protein interactions for RNA: ENST00000430771.2

CHD4-202, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 4

Gene CHD4, Length 527 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-202ENST00000430771 SLITRK6Q9H5Y7 841 aa11.53□□□□□ -0.56
CHD4-202ENST00000430771 TRPC7Q9HCX4 862 aa11.53□□□□□ -0.56
CHD4-202ENST00000430771 PARVAQ9NVD7 372 aa11.53□□□□□ -0.56
CHD4-202ENST00000430771 STAP1Q9ULZ2 295 aa11.53□□□□□ -0.56
CHD4-202ENST00000430771 USP15Q9Y4E8 981 aaPredicted RBP11.53□□□□□ -0.56
CHD4-202ENST00000430771 NOTCH4Q99466 2003 aa11.53□□□□□ -0.56
CHD4-202ENST00000430771 TRAV19A0A0A6YYK7 116 aa11.52□□□□□ -0.57
CHD4-202ENST00000430771 ATMINO43313 823 aaPredicted RBP11.52□□□□□ -0.57
CHD4-202ENST00000430771 TLR5O60602 858 aa11.52□□□□□ -0.57
CHD4-202ENST00000430771 GABBR2O75899 941 aa11.52□□□□□ -0.57
CHD4-202ENST00000430771 OAS1P00973 400 aaKnown RBP11.52□□□□□ -0.57
CHD4-202ENST00000430771 CCDC175P0C221 793 aa11.52□□□□□ -0.57
CHD4-202ENST00000430771 KRT3P12035 628 aa11.52□□□□□ -0.57
CHD4-202ENST00000430771 RARGP13631 454 aa11.52□□□□□ -0.57
CHD4-202ENST00000430771 CEBPBP17676 345 aa11.52□□□□□ -0.57
CHD4-202ENST00000430771 VAV2P52735 878 aa11.52□□□□□ -0.57
CHD4-202ENST00000430771 YWHAZP63104 245 aaKnown RBP11.52□□□□□ -0.57
CHD4-202ENST00000430771 GPC5P78333 572 aa11.52□□□□□ -0.57
CHD4-202ENST00000430771 NTHL1P78549 312 aa11.52□□□□□ -0.57
CHD4-202ENST00000430771 CBX2Q14781 532 aaPredicted RBP11.52□□□□□ -0.57
CHD4-202ENST00000430771 TEAD2Q15562 447 aa11.52□□□□□ -0.57
CHD4-202ENST00000430771 SLC5A9Q2M3M2 681 aa11.52□□□□□ -0.57
CHD4-202ENST00000430771 LEXMQ3ZCV2 418 aa11.52□□□□□ -0.57
CHD4-202ENST00000430771 HECTD3Q5T447 861 aa11.52□□□□□ -0.57
CHD4-202ENST00000430771 BSPRYQ5W0U4 402 aa11.52□□□□□ -0.57
CHD4-202ENST00000430771 PLEKHA7Q6IQ23 1121 aa11.52□□□□□ -0.57
CHD4-202ENST00000430771 TMEM150AQ86TG1 271 aa11.52□□□□□ -0.57
CHD4-202ENST00000430771 RHOT2Q8IXI1 618 aa11.52□□□□□ -0.57
CHD4-202ENST00000430771 ZNF276Q8N554 614 aa11.52□□□□□ -0.57
CHD4-202ENST00000430771 ACRBPQ8NEB7 543 aa11.52□□□□□ -0.57
CHD4-202ENST00000430771 RFFLQ8WZ73 363 aa11.52□□□□□ -0.57
CHD4-202ENST00000430771 SUSD6Q92537 303 aa11.52□□□□□ -0.57
CHD4-202ENST00000430771 PIWIL1Q96J94 861 aaKnown RBP11.52□□□□□ -0.57
CHD4-202ENST00000430771 MCEEQ96PE7 176 aa11.52□□□□□ -0.57
CHD4-202ENST00000430771 TSGA10Q9BZW7 698 aa11.52□□□□□ -0.57
CHD4-202ENST00000430771 THAP2Q9H0W7 228 aa11.52□□□□□ -0.57
CHD4-202ENST00000430771 NMUR1Q9HB89 426 aa11.52□□□□□ -0.57
CHD4-202ENST00000430771 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.52□□□□□ -0.577e-8■□□□□ 9.1
CHD4-202ENST00000430771 RRN3Q9NYV6 651 aa11.52□□□□□ -0.57
CHD4-202ENST00000430771 THEGQ9P2T0 379 aa11.52□□□□□ -0.57
CHD4-202ENST00000430771 UVRAGQ9P2Y5 699 aa11.52□□□□□ -0.57
CHD4-202ENST00000430771 MYO1AQ9UBC5 1043 aa11.52□□□□□ -0.57
CHD4-202ENST00000430771 LCMT1Q9UIC8 334 aa11.52□□□□□ -0.57
CHD4-202ENST00000430771 PCDHA13Q9Y5I0 950 aa11.52□□□□□ -0.57
CHD4-202ENST00000430771 BRWD1Q9NSI6 2320 aa11.51□□□□□ -0.57
CHD4-202ENST00000430771 SIGLEC16A6NMB1 481 aa11.51□□□□□ -0.57
CHD4-202ENST00000430771 ZNF263O14978 683 aa11.51□□□□□ -0.57
CHD4-202ENST00000430771 MBTPS2O43462 519 aa11.51□□□□□ -0.57
CHD4-202ENST00000430771 GRAP2O75791 330 aa11.51□□□□□ -0.57
CHD4-202ENST00000430771 CYP1A2P05177 515 aa11.51□□□□□ -0.57
CHD4-202ENST00000430771 CKMP06732 381 aa11.51□□□□□ -0.57
CHD4-202ENST00000430771 NCAM1P13591 858 aa11.51□□□□□ -0.57
CHD4-202ENST00000430771 SDC4P31431 198 aa11.51□□□□□ -0.57
CHD4-202ENST00000430771 AVPR1AP37288 418 aa11.51□□□□□ -0.57
CHD4-202ENST00000430771 CCR2P41597 374 aa11.51□□□□□ -0.57
CHD4-202ENST00000430771 AAK1Q2M2I8 961 aa11.51□□□□□ -0.57
CHD4-202ENST00000430771 C10orf120Q5SQS8 335 aa11.51□□□□□ -0.57
CHD4-202ENST00000430771 GPR158Q5T848 1215 aa11.51□□□□□ -0.57
CHD4-202ENST00000430771 MSANTD2Q6P1R3 559 aa11.51□□□□□ -0.57
CHD4-202ENST00000430771 KLHDC10Q6PID8 442 aa11.51□□□□□ -0.57
CHD4-202ENST00000430771 HFE2Q6ZVN8 426 aa11.51□□□□□ -0.57
CHD4-202ENST00000430771 SCD5Q86SK9 330 aa11.51□□□□□ -0.57
CHD4-202ENST00000430771 NPAS3Q8IXF0 933 aa11.51□□□□□ -0.57
CHD4-202ENST00000430771 ZNF564Q8TBZ8 553 aaPredicted RBP11.51□□□□□ -0.57
CHD4-202ENST00000430771 ING5Q8WYH8 240 aa11.51□□□□□ -0.57
CHD4-202ENST00000430771 NDRG1Q92597 394 aaKnown RBP11.51□□□□□ -0.57
CHD4-202ENST00000430771 TCEAL4Q96EI5 215 aa11.51□□□□□ -0.57
CHD4-202ENST00000430771 SERPINB11Q96P15 392 aa11.51□□□□□ -0.57
CHD4-202ENST00000430771 SLC2A13Q96QE2 648 aa11.51□□□□□ -0.57
CHD4-202ENST00000430771 DESI2Q9BSY9 194 aa11.51□□□□□ -0.57
CHD4-202ENST00000430771 NUP85Q9BW27 656 aa11.51□□□□□ -0.57
CHD4-202ENST00000430771 PACSIN1Q9BY11 444 aa11.51□□□□□ -0.57
CHD4-202ENST00000430771 SMOC2Q9H3U7 446 aa11.51□□□□□ -0.57
CHD4-202ENST00000430771 POMKQ9H5K3 350 aa11.51□□□□□ -0.57
CHD4-202ENST00000430771 TASP1Q9H6P5 420 aa11.51□□□□□ -0.57
CHD4-202ENST00000430771 FAM204AQ9H8W3 233 aa11.51□□□□□ -0.57
CHD4-202ENST00000430771 KIF9Q9HAQ2 790 aa11.51□□□□□ -0.57
CHD4-202ENST00000430771 TMEM51Q9NW97 253 aa11.51□□□□□ -0.57
CHD4-202ENST00000430771 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.51□□□□□ -0.57
CHD4-202ENST00000430771 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.51□□□□□ -0.57
CHD4-202ENST00000430771 GDE1Q9NZC3 331 aa11.51□□□□□ -0.57
CHD4-202ENST00000430771 CTTNBP2NLQ9P2B4 639 aa11.51□□□□□ -0.57
CHD4-202ENST00000430771 CHORDC1Q9UHD1 332 aaPredicted RBP11.51□□□□□ -0.57
CHD4-202ENST00000430771 RASAL2Q9UJF2 1139 aa11.51□□□□□ -0.57
CHD4-202ENST00000430771 ZFP37Q9Y6Q3 630 aaPredicted RBP11.51□□□□□ -0.57
CHD4-202ENST00000430771 DOCK6Q96HP0 2047 aa11.5□□□□□ -0.57
CHD4-202ENST00000430771 TCRBV5S1A1TA0A578 114 aa11.5□□□□□ -0.57
CHD4-202ENST00000430771 MOSPD3O75425 235 aa11.5□□□□□ -0.57
CHD4-202ENST00000430771 OLFM2O95897 454 aa11.5□□□□□ -0.57
CHD4-202ENST00000430771 MBL2P11226 248 aaPredicted RBP11.5□□□□□ -0.57
CHD4-202ENST00000430771 GJA1P17302 382 aa11.5□□□□□ -0.57
CHD4-202ENST00000430771 GPD1P21695 349 aa11.5□□□□□ -0.57
CHD4-202ENST00000430771 GBP2P32456 591 aaPredicted RBP11.5□□□□□ -0.57
CHD4-202ENST00000430771 NOS2P35228 1153 aa11.5□□□□□ -0.57
CHD4-202ENST00000430771 ATP5C1P36542 298 aaKnown RBP11.5□□□□□ -0.57
CHD4-202ENST00000430771 FLT3P36888 993 aa11.5□□□□□ -0.57
CHD4-202ENST00000430771 MATKP42679 507 aa11.5□□□□□ -0.57
CHD4-202ENST00000430771 SULT1E1P49888 294 aa11.5□□□□□ -0.57
CHD4-202ENST00000430771 RNASE9P60153 205 aaKnown RBP11.5□□□□□ -0.57
CHD4-202ENST00000430771 KIF5AQ12840 1032 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 172.3 ms