RNA–Protein interactions for RNA: ENST00000430118.1

HMGB3-203, Transcript of high mobility group box 3, humanhuman

TSL 1 (best)

Gene HMGB3, Length 529 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3-203ENST00000430118 OAS3Q9Y6K5 1087 aaKnown RBP4.64□□□□□ -1.67
HMGB3-203ENST00000430118 RGPD2P0DJD1 1756 aa4.63□□□□□ -1.67
HMGB3-203ENST00000430118 A0A0B4J269 797 aa4.63□□□□□ -1.67
HMGB3-203ENST00000430118 A0A1W2PRX2 142 aa4.63□□□□□ -1.67
HMGB3-203ENST00000430118 UBE2QL1A1L167 161 aa4.63□□□□□ -1.67
HMGB3-203ENST00000430118 PRR5-ARHGAP8B1AHC4 643 aa4.63□□□□□ -1.67
HMGB3-203ENST00000430118 E7ENX8 843 aa4.63□□□□□ -1.67
HMGB3-203ENST00000430118 ASNA1O43681 348 aa4.63□□□□□ -1.67
HMGB3-203ENST00000430118 COQ9O75208 318 aa4.63□□□□□ -1.67
HMGB3-203ENST00000430118 ACTL6BO94805 426 aa4.63□□□□□ -1.67
HMGB3-203ENST00000430118 DDNO94850 711 aaPredicted RBP4.63□□□□□ -1.67
HMGB3-203ENST00000430118 MST1P26927 711 aa4.63□□□□□ -1.67
HMGB3-203ENST00000430118 EPHX2P34913 555 aa4.63□□□□□ -1.67
HMGB3-203ENST00000430118 KRT9P35527 623 aa4.63□□□□□ -1.67
HMGB3-203ENST00000430118 IRAK1P51617 712 aa4.63□□□□□ -1.67
HMGB3-203ENST00000430118 ALDH18A1P54886 795 aaKnown RBP4.63□□□□□ -1.67
HMGB3-203ENST00000430118 LOXL3P58215 753 aa4.63□□□□□ -1.67
HMGB3-203ENST00000430118 RAC3P60763 192 aa4.63□□□□□ -1.67
HMGB3-203ENST00000430118 AP2B1P63010 937 aa4.63□□□□□ -1.67
HMGB3-203ENST00000430118 TAP2Q03519 686 aa4.63□□□□□ -1.67
HMGB3-203ENST00000430118 KIAA2012Q0VF49 1180 aa4.63□□□□□ -1.67
HMGB3-203ENST00000430118 G3BP1Q13283 466 aaKnown RBP eCLIP4.63□□□□□ -1.67
HMGB3-203ENST00000430118 PDE1CQ14123 709 aaPredicted RBP4.63□□□□□ -1.67
HMGB3-203ENST00000430118 RNF151Q2KHN1 245 aa4.63□□□□□ -1.67
HMGB3-203ENST00000430118 TRIM60Q495X7 471 aa4.63□□□□□ -1.67
HMGB3-203ENST00000430118 ATPAF1Q5TC12 328 aaPredicted RBP4.63□□□□□ -1.67
HMGB3-203ENST00000430118 SULT6B1Q6IMI4 303 aa4.63□□□□□ -1.67
HMGB3-203ENST00000430118 FAM111BQ6SJ93 734 aa4.63□□□□□ -1.67
HMGB3-203ENST00000430118 CRTC1Q6UUV9 634 aa4.63□□□□□ -1.67
HMGB3-203ENST00000430118 PLEKHH3Q7Z736 793 aa4.63□□□□□ -1.67
HMGB3-203ENST00000430118 C2CD5Q86YS7 1000 aa4.63□□□□□ -1.67
HMGB3-203ENST00000430118 HERC6Q8IVU3 1022 aa4.63□□□□□ -1.67
HMGB3-203ENST00000430118 SLC44A2Q8IWA5 706 aaPredicted RBP4.63□□□□□ -1.67
HMGB3-203ENST00000430118 CCDC117Q8IWD4 279 aaPredicted RBP4.63□□□□□ -1.67
HMGB3-203ENST00000430118 NRSN1Q8IZ57 195 aa4.63□□□□□ -1.67
HMGB3-203ENST00000430118 TSPYL6Q8N831 410 aa4.63□□□□□ -1.67
HMGB3-203ENST00000430118 PCYOX1LQ8NBM8 494 aa4.63□□□□□ -1.67
HMGB3-203ENST00000430118 FAM46DQ8NEK8 389 aa4.63□□□□□ -1.67
HMGB3-203ENST00000430118 OR6Y1Q8NGX8 325 aa4.63□□□□□ -1.67
HMGB3-203ENST00000430118 RUBCNQ92622 972 aa4.63□□□□□ -1.67
HMGB3-203ENST00000430118 TFAP2CQ92754 450 aa4.63□□□□□ -1.67
HMGB3-203ENST00000430118 HDAC2Q92769 488 aaKnown RBP4.63□□□□□ -1.67
HMGB3-203ENST00000430118 KCNN1Q92952 543 aa4.63□□□□□ -1.67
HMGB3-203ENST00000430118 ZDHHC12Q96GR4 267 aa4.63□□□□□ -1.67
HMGB3-203ENST00000430118 ZNF512Q96ME7 567 aaPredicted RBP4.63□□□□□ -1.67
HMGB3-203ENST00000430118 PWWP2AQ96N64 755 aa4.63□□□□□ -1.67
HMGB3-203ENST00000430118 NAP1L5Q96NT1 182 aaPredicted RBP4.63□□□□□ -1.67
HMGB3-203ENST00000430118 REXO4Q9GZR2 422 aaKnown RBP4.63□□□□□ -1.67
HMGB3-203ENST00000430118 PABPC3Q9H361 631 aaKnown RBP4.63□□□□□ -1.67
HMGB3-203ENST00000430118 TAF1DQ9H5J8 278 aaPredicted RBP4.63□□□□□ -1.67
HMGB3-203ENST00000430118 SEPSECSQ9HD40 501 aaKnown RBP4.63□□□□□ -1.67
HMGB3-203ENST00000430118 RIC8AQ9NPQ8 531 aa4.63□□□□□ -1.67
HMGB3-203ENST00000430118 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP4.63□□□□□ -1.67
HMGB3-203ENST00000430118 ASAP1Q9ULH1 1129 aa4.63□□□□□ -1.67
HMGB3-203ENST00000430118 ZMYND8Q9ULU4 1186 aaPredicted RBP4.63□□□□□ -1.67
HMGB3-203ENST00000430118 NFU1Q9UMS0 254 aa4.63□□□□□ -1.67
HMGB3-203ENST00000430118 SLC45A2Q9UMX9 530 aa4.63□□□□□ -1.67
HMGB3-203ENST00000430118 AGAP1Q9UPQ3 857 aa4.63□□□□□ -1.67
HMGB3-203ENST00000430118 HDAC5Q9UQL6 1122 aa4.63□□□□□ -1.67
HMGB3-203ENST00000430118 UTP18Q9Y5J1 556 aaKnown RBP eCLIP4.63□□□□□ -1.67
HMGB3-203ENST00000430118 HS3ST4Q9Y661 456 aa4.63□□□□□ -1.67
HMGB3-203ENST00000430118 LTBP1Q14766 1721 aa4.63□□□□□ -1.67
HMGB3-203ENST00000430118 DICER1Q9UPY3 1922 aaKnown RBP4.62□□□□□ -1.67
HMGB3-203ENST00000430118 A0A0U1RQG5 324 aaPredicted RBP4.62□□□□□ -1.67
HMGB3-203ENST00000430118 CDHR4A6H8M9 788 aa4.62□□□□□ -1.67
HMGB3-203ENST00000430118 MROH6A6NGR9 719 aa4.62□□□□□ -1.67
HMGB3-203ENST00000430118 BTBD11A6QL63 1104 aa4.62□□□□□ -1.67
HMGB3-203ENST00000430118 ERVV-2B6SEH9 535 aa4.62□□□□□ -1.67
HMGB3-203ENST00000430118 E9PLN8 166 aa4.62□□□□□ -1.67
HMGB3-203ENST00000430118 RAB27BO00194 218 aa4.62□□□□□ -1.67
HMGB3-203ENST00000430118 TIMM44O43615 452 aa4.62□□□□□ -1.67
HMGB3-203ENST00000430118 RNASEH2AO75792 299 aaKnown RBP4.62□□□□□ -1.67
HMGB3-203ENST00000430118 IPO13O94829 963 aaKnown RBP4.62□□□□□ -1.67
HMGB3-203ENST00000430118 TNFRSF6BO95407 300 aa4.62□□□□□ -1.67
HMGB3-203ENST00000430118 TK1P04183 234 aa4.62□□□□□ -1.67
HMGB3-203ENST00000430118 CKMT1AP12532 417 aa4.62□□□□□ -1.67
HMGB3-203ENST00000430118 RPS19P39019 145 aaKnown RBP4.62□□□□□ -1.67
HMGB3-203ENST00000430118 PTTG1IPP53801 180 aa4.62□□□□□ -1.67
HMGB3-203ENST00000430118 SOX10P56693 466 aa4.62□□□□□ -1.67
HMGB3-203ENST00000430118 ACTR2P61160 394 aa4.62□□□□□ -1.67
HMGB3-203ENST00000430118 RAP2BP61225 183 aa4.62□□□□□ -1.67
HMGB3-203ENST00000430118 DDR1Q08345 913 aa4.62□□□□□ -1.67
HMGB3-203ENST00000430118 TRPC3Q13507 836 aa4.62□□□□□ -1.67
HMGB3-203ENST00000430118 ATP1A4Q13733 1029 aa4.62□□□□□ -1.67
HMGB3-203ENST00000430118 RRS1Q15050 365 aaKnown RBP4.62□□□□□ -1.67
HMGB3-203ENST00000430118 ZNF750Q32MQ0 723 aa4.62□□□□□ -1.67
HMGB3-203ENST00000430118 PLA1AQ53H76 456 aa4.62□□□□□ -1.67
HMGB3-203ENST00000430118 ARHGAP15Q53QZ3 475 aa4.62□□□□□ -1.67
HMGB3-203ENST00000430118 TMTC4Q5T4D3 741 aa4.62□□□□□ -1.67
HMGB3-203ENST00000430118 MCTP2Q6DN12 878 aa4.62□□□□□ -1.67
HMGB3-203ENST00000430118 EFCAB12Q6NXP0 572 aa4.62□□□□□ -1.67
HMGB3-203ENST00000430118 RAB11FIP2Q7L804 512 aa4.62□□□□□ -1.67
HMGB3-203ENST00000430118 SUGP1Q8IWZ8 645 aaKnown RBP4.62□□□□□ -1.67
HMGB3-203ENST00000430118 KBTBD2Q8IY47 623 aa4.62□□□□□ -1.67
HMGB3-203ENST00000430118 CNTROBQ8N137 903 aa4.62□□□□□ -1.67
HMGB3-203ENST00000430118 ESX1Q8N693 406 aa4.62□□□□□ -1.67
HMGB3-203ENST00000430118 USP38Q8NB14 1042 aa4.62□□□□□ -1.67
HMGB3-203ENST00000430118 PDPRQ8NCN5 879 aa4.62□□□□□ -1.67
HMGB3-203ENST00000430118 ASB12Q8WXK4 309 aa4.62□□□□□ -1.67
HMGB3-203ENST00000430118 ZNF622Q969S3 477 aaKnown RBP eCLIP4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 255 ms