RNA–Protein interactions for RNA: ENST00000429411.5

HPS4-205, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 3,492 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-205ENST00000429411 CHCHD3Q9NX63 227 aaKnown RBP8.37□□□□□ -1.07
HPS4-205ENST00000429411 GRID1Q9ULK0 1009 aa8.37□□□□□ -1.07
HPS4-205ENST00000429411 STARD13Q9Y3M8 1113 aa8.37□□□□□ -1.07
HPS4-205ENST00000429411 TLL2Q9Y6L7 1015 aa8.37□□□□□ -1.07
HPS4-205ENST00000429411 CDK5RAP2Q96SN8 1893 aa8.37□□□□□ -1.07
HPS4-205ENST00000429411 A0A087WZ62 844 aa8.37□□□□□ -1.07
HPS4-205ENST00000429411 TCRBV9S1A1TA0A576 114 aa8.37□□□□□ -1.07
HPS4-205ENST00000429411 EME2A4GXA9 379 aaPredicted RBP8.37□□□□□ -1.07
HPS4-205ENST00000429411 FCHO1O14526 889 aa8.37□□□□□ -1.07
HPS4-205ENST00000429411 ALOX15BO15296 676 aa8.37□□□□□ -1.07
HPS4-205ENST00000429411 CFLARO15519 480 aa8.37□□□□□ -1.07
HPS4-205ENST00000429411 NPTXRO95502 500 aa8.37□□□□□ -1.07
HPS4-205ENST00000429411 TOP3BO95985 862 aaKnown RBP8.37□□□□□ -1.07
HPS4-205ENST00000429411 HMGCRP04035 888 aa8.37□□□□□ -1.07
HPS4-205ENST00000429411 KLRC2P26717 231 aa8.37□□□□□ -1.07
HPS4-205ENST00000429411 CA8P35219 290 aa8.37□□□□□ -1.07
HPS4-205ENST00000429411 PTDSS1P48651 473 aaKnown RBP8.37□□□□□ -1.07
HPS4-205ENST00000429411 EFNA5P52803 228 aa8.37□□□□□ -1.07
HPS4-205ENST00000429411 AQP5P55064 265 aa8.37□□□□□ -1.07
HPS4-205ENST00000429411 GPX6P59796 221 aa8.37□□□□□ -1.07
HPS4-205ENST00000429411 NME3Q13232 169 aa8.37□□□□□ -1.07
HPS4-205ENST00000429411 CRYMQ14894 314 aa8.37□□□□□ -1.07
HPS4-205ENST00000429411 RASIP1Q5U651 963 aa8.37□□□□□ -1.07
HPS4-205ENST00000429411 ZCCHC8Q6NZY4 707 aaKnown RBP8.37□□□□□ -1.07
HPS4-205ENST00000429411 DSTYKQ6XUX3 929 aa8.37□□□□□ -1.07
HPS4-205ENST00000429411 WDR49Q8IV35 697 aa8.37□□□□□ -1.07
HPS4-205ENST00000429411 PTPRN2Q92932 1015 aa8.37□□□□□ -1.07
HPS4-205ENST00000429411 PRR11Q96HE9 360 aaPredicted RBP8.37□□□□□ -1.07
HPS4-205ENST00000429411 NSL1Q96IY1 281 aa8.37□□□□□ -1.07
HPS4-205ENST00000429411 VCPIP1Q96JH7 1222 aa8.37□□□□□ -1.07
HPS4-205ENST00000429411 CLPTM1LQ96KA5 538 aa8.37□□□□□ -1.07
HPS4-205ENST00000429411 ZNF570Q96NI8 536 aa8.37□□□□□ -1.07
HPS4-205ENST00000429411 SRPK1Q96SB4 655 aaKnown RBP8.37□□□□□ -1.07
HPS4-205ENST00000429411 FDXACB1Q9BRP7 624 aaPredicted RBP8.37□□□□□ -1.07
HPS4-205ENST00000429411 NTPCRQ9BSD7 190 aaKnown RBP8.37□□□□□ -1.07
HPS4-205ENST00000429411 SYNPO2Q9UMS6 1093 aa8.37□□□□□ -1.07
HPS4-205ENST00000429411 SEC23IPQ9Y6Y8 1000 aaKnown RBP8.37□□□□□ -1.07
HPS4-205ENST00000429411 APOL1O14791 398 aa8.36□□□□□ -1.07
HPS4-205ENST00000429411 MAP3K7O43318 606 aa8.36□□□□□ -1.07
HPS4-205ENST00000429411 UGT1A9O60656 530 aa8.36□□□□□ -1.07
HPS4-205ENST00000429411 LGR5O75473 907 aa8.36□□□□□ -1.07
HPS4-205ENST00000429411 MICAL2O94851 1124 aa8.36□□□□□ -1.07
HPS4-205ENST00000429411 ERBB2P04626 1255 aa8.36□□□□□ -1.07
HPS4-205ENST00000429411 ATP4AP20648 1035 aa8.36□□□□□ -1.07
HPS4-205ENST00000429411 GPD1P21695 349 aa8.36□□□□□ -1.07
HPS4-205ENST00000429411 CALB2P22676 271 aa8.36□□□□□ -1.07
HPS4-205ENST00000429411 SERPINB4P48594 390 aa8.36□□□□□ -1.07
HPS4-205ENST00000429411 RPL10AP62906 217 aaKnown RBP8.36□□□□□ -1.07
HPS4-205ENST00000429411 CCDC15Q0P6D6 951 aa8.36□□□□□ -1.07
HPS4-205ENST00000429411 SNAPC2Q13487 334 aa8.36□□□□□ -1.07
HPS4-205ENST00000429411 RASA2Q15283 850 aa8.36□□□□□ -1.07
HPS4-205ENST00000429411 GOLGA7BQ2TAP0 167 aa8.36□□□□□ -1.07
HPS4-205ENST00000429411 SPRYD7Q5W111 196 aa8.36□□□□□ -1.07
HPS4-205ENST00000429411 RGS9BPQ6ZS82 235 aa8.36□□□□□ -1.07
HPS4-205ENST00000429411 DENND5BQ6ZUT9 1274 aa8.36□□□□□ -1.07
HPS4-205ENST00000429411 POLNQ7Z5Q5 900 aa8.36□□□□□ -1.07
HPS4-205ENST00000429411 ERO1BQ86YB8 467 aa8.36□□□□□ -1.07
HPS4-205ENST00000429411 SLC26A7Q8TE54 656 aa8.36□□□□□ -1.07
HPS4-205ENST00000429411 FAM172AQ8WUF8 416 aa8.36□□□□□ -1.07
HPS4-205ENST00000429411 E2F7Q96AV8 911 aa8.36□□□□□ -1.07
HPS4-205ENST00000429411 DDX50Q9BQ39 737 aaKnown RBP8.36□□□□□ -1.07
HPS4-205ENST00000429411 B3GNT5Q9BYG0 378 aa8.36□□□□□ -1.07
HPS4-205ENST00000429411 UNKQ9C0B0 810 aaKnown RBP8.36□□□□□ -1.07
HPS4-205ENST00000429411 VCXQ9H320 206 aa8.36□□□□□ -1.07
HPS4-205ENST00000429411 UGT1A7Q9HAW7 530 aa8.36□□□□□ -1.07
HPS4-205ENST00000429411 UGT1A10Q9HAW8 530 aa8.36□□□□□ -1.07
HPS4-205ENST00000429411 UGT1A8Q9HAW9 530 aa8.36□□□□□ -1.07
HPS4-205ENST00000429411 ARHGEF3Q9NR81 526 aa8.36□□□□□ -1.07
HPS4-205ENST00000429411 SLC24A2Q9UI40 661 aa8.36□□□□□ -1.07
HPS4-205ENST00000429411 ZNF232Q9UNY5 417 aa8.36□□□□□ -1.07
HPS4-205ENST00000429411 AFG3L2Q9Y4W6 797 aa8.36□□□□□ -1.07
HPS4-205ENST00000429411 SPECC1L-ADORA2AF8WAN1 911 aa8.36□□□□□ -1.07
HPS4-205ENST00000429411 PDHXO00330 501 aa8.36□□□□□ -1.07
HPS4-205ENST00000429411 KRT38O76015 456 aa8.36□□□□□ -1.07
HPS4-205ENST00000429411 STAG3L1P0CL83 205 aa8.36□□□□□ -1.07
HPS4-205ENST00000429411 SKIP12755 728 aa8.36□□□□□ -1.07
HPS4-205ENST00000429411 PTPN4P29074 926 aa8.36□□□□□ -1.07
HPS4-205ENST00000429411 NDST1P52848 882 aa8.36□□□□□ -1.07
HPS4-205ENST00000429411 ZNF252P-AS1Q0IIN9 211 aa8.36□□□□□ -1.07
HPS4-205ENST00000429411 WLSQ5T9L3 541 aa8.36□□□□□ -1.07
HPS4-205ENST00000429411 HEATR6Q6AI08 1181 aaKnown RBP8.36□□□□□ -1.07
HPS4-205ENST00000429411 JADE1Q6IE81 842 aa8.36□□□□□ -1.07
HPS4-205ENST00000429411 KDELC2Q7Z4H8 507 aa8.36□□□□□ -1.07
HPS4-205ENST00000429411 CLNKQ7Z7G1 428 aa8.36□□□□□ -1.07
HPS4-205ENST00000429411 ZNF354CQ86Y25 554 aa8.36□□□□□ -1.07
HPS4-205ENST00000429411 PPP4R1Q8TF05 950 aa8.36□□□□□ -1.07
HPS4-205ENST00000429411 STK32AQ8WU08 396 aa8.36□□□□□ -1.07
HPS4-205ENST00000429411 ATP2A3Q93084 1043 aa8.36□□□□□ -1.07
HPS4-205ENST00000429411 RNF34Q969K3 372 aa8.36□□□□□ -1.07
HPS4-205ENST00000429411 TWNKQ96RR1 684 aa8.36□□□□□ -1.07
HPS4-205ENST00000429411 APOL2Q9BQE5 337 aa8.36□□□□□ -1.07
HPS4-205ENST00000429411 LPIN3Q9BQK8 851 aa8.36□□□□□ -1.07
HPS4-205ENST00000429411 FOXP3Q9BZS1 431 aa8.36□□□□□ -1.07
HPS4-205ENST00000429411 CCDC134Q9H6E4 229 aa8.36□□□□□ -1.07
HPS4-205ENST00000429411 SLC17A6Q9P2U8 582 aa8.36□□□□□ -1.07
HPS4-205ENST00000429411 RABGEF1Q9UJ41 708 aa8.36□□□□□ -1.07
HPS4-205ENST00000429411 ZNF214Q9UL59 606 aaPredicted RBP8.36□□□□□ -1.07
HPS4-205ENST00000429411 ITM2BQ9Y287 266 aa8.36□□□□□ -1.07
HPS4-205ENST00000429411 ATP8B3O60423 1300 aa8.36□□□□□ -1.07
HPS4-205ENST00000429411 SCN9AQ15858 1988 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms