RNA–Protein interactions for RNA: ENST00000428728.5

TRIM39-209, Transcript of tripartite motif containing 39, humanhuman

TSL 3

Gene TRIM39, Length 1,013 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-209ENST00000428728 OSER1Q9NX31 292 aa18.03■□□□□ 0.48
TRIM39-209ENST00000428728 SCML2Q9UQR0 700 aa18.03■□□□□ 0.48
TRIM39-209ENST00000428728 ADAMTS9Q9P2N4 1935 aa18.02■□□□□ 0.48
TRIM39-209ENST00000428728 A0A1W2PQH9 124 aa18.02■□□□□ 0.48
TRIM39-209ENST00000428728 MDM4O15151 490 aa18.02■□□□□ 0.48
TRIM39-209ENST00000428728 HOXC11O43248 304 aaPredicted RBP18.02■□□□□ 0.48
TRIM39-209ENST00000428728 TULP3O75386 442 aa18.02■□□□□ 0.48
TRIM39-209ENST00000428728 CHRM1P11229 460 aaPredicted RBP18.02■□□□□ 0.48
TRIM39-209ENST00000428728 KIR2DL1P43626 348 aaPredicted RBP18.02■□□□□ 0.48
TRIM39-209ENST00000428728 MXI1P50539 228 aa18.02■□□□□ 0.48
TRIM39-209ENST00000428728 PNOCQ13519 176 aa18.02■□□□□ 0.48
TRIM39-209ENST00000428728 EOGTQ5NDL2 527 aa18.02■□□□□ 0.48
TRIM39-209ENST00000428728 TMEM25Q86YD3 366 aa18.02■□□□□ 0.48
TRIM39-209ENST00000428728 ETFBKMTQ8IXQ9 262 aa18.02■□□□□ 0.48
TRIM39-209ENST00000428728 WHAMMQ8TF30 809 aa18.02■□□□□ 0.48
TRIM39-209ENST00000428728 CYLDQ9NQC7 956 aa18.02■□□□□ 0.48
TRIM39-209ENST00000428728 VPS45Q9NRW7 570 aa18.02■□□□□ 0.48
TRIM39-209ENST00000428728 BCCIPQ9P287 314 aaKnown RBP eCLIP18.02■□□□□ 0.48
TRIM39-209ENST00000428728 NUDT5Q9UKK9 219 aa18.02■□□□□ 0.48
TRIM39-209ENST00000428728 PI4KAP42356 2102 aa18.02■□□□□ 0.47
TRIM39-209ENST00000428728 TBC1D3BA6NDS4 549 aa18.01■□□□□ 0.47
TRIM39-209ENST00000428728 ALDH1A2O94788 518 aa18.01■□□□□ 0.47
TRIM39-209ENST00000428728 CAVIN2O95810 425 aa18.01■□□□□ 0.47
TRIM39-209ENST00000428728 ADRB1P08588 477 aa18.01■□□□□ 0.47
TRIM39-209ENST00000428728 ATP5C1P36542 298 aaKnown RBP18.01■□□□□ 0.47
TRIM39-209ENST00000428728 LIMK1P53667 647 aa18.01■□□□□ 0.47
TRIM39-209ENST00000428728 GOLGA8FQ08AF8 430 aa18.01■□□□□ 0.47
TRIM39-209ENST00000428728 GOLGA8DPQ0D2H9 430 aa18.01■□□□□ 0.47
TRIM39-209ENST00000428728 EDRF1Q3B7T1 1238 aa18.01■□□□□ 0.47
TRIM39-209ENST00000428728 HSF5Q4G112 596 aaPredicted RBP18.01■□□□□ 0.47
TRIM39-209ENST00000428728 C10orf76Q5T2E6 689 aa18.01■□□□□ 0.47
TRIM39-209ENST00000428728 PPP1R26Q5T8A7 1209 aaPredicted RBP18.01■□□□□ 0.47
TRIM39-209ENST00000428728 STPG1Q5TH74 334 aa18.01■□□□□ 0.47
TRIM39-209ENST00000428728 PMS2CLQ68D20 193 aa18.01■□□□□ 0.47
TRIM39-209ENST00000428728 KRT39Q6A163 491 aa18.01■□□□□ 0.47
TRIM39-209ENST00000428728 TERB1Q8NA31 727 aa18.01■□□□□ 0.47
TRIM39-209ENST00000428728 HMGB4Q8WW32 186 aa18.01■□□□□ 0.47
TRIM39-209ENST00000428728 SEMA4DQ92854 862 aa18.01■□□□□ 0.47
TRIM39-209ENST00000428728 CCDC34Q96HJ3 373 aa18.01■□□□□ 0.47
TRIM39-209ENST00000428728 EDEM2Q9BV94 578 aa18.01■□□□□ 0.47
TRIM39-209ENST00000428728 KLF16Q9BXK1 252 aaPredicted RBP18.01■□□□□ 0.47
TRIM39-209ENST00000428728 NMUR1Q9HB89 426 aa18.01■□□□□ 0.47
TRIM39-209ENST00000428728 DEC1Q9P2X7 70 aa18.01■□□□□ 0.47
TRIM39-209ENST00000428728 LSM7Q9UK45 103 aaKnown RBP18.01■□□□□ 0.47
TRIM39-209ENST00000428728 PCDHA5Q9Y5H7 936 aa18.01■□□□□ 0.47
TRIM39-209ENST00000428728 GTF3C3Q9Y5Q9 886 aa18.01■□□□□ 0.47
TRIM39-209ENST00000428728 CNOT1A5YKK6 2376 aaKnown RBP18■□□□□ 0.47
TRIM39-209ENST00000428728 TCRBV21S2A2A0A5A6 115 aa18■□□□□ 0.47
TRIM39-209ENST00000428728 BCLAF3A2AJT9 711 aaKnown RBP18■□□□□ 0.47
TRIM39-209ENST00000428728 NEDD8-MDP1E9PL57 170 aa18■□□□□ 0.47
TRIM39-209ENST00000428728 TRIM24O15164 1050 aa18■□□□□ 0.47
TRIM39-209ENST00000428728 ADAM23O75077 832 aa18■□□□□ 0.47
TRIM39-209ENST00000428728 EPB41P11171 864 aaKnown RBP18■□□□□ 0.47
TRIM39-209ENST00000428728 RARGP13631 454 aa18■□□□□ 0.47
TRIM39-209ENST00000428728 TNFRSF4P43489 277 aa18■□□□□ 0.47
TRIM39-209ENST00000428728 ENPEPQ07075 957 aa18■□□□□ 0.47
TRIM39-209ENST00000428728 DCAF17Q5H9S7 520 aaPredicted RBP18■□□□□ 0.47
TRIM39-209ENST00000428728 C10orf120Q5SQS8 335 aa18■□□□□ 0.47
TRIM39-209ENST00000428728 TCERG1LQ5VWI1 586 aa18■□□□□ 0.47
TRIM39-209ENST00000428728 TPGS1Q6ZTW0 290 aa18■□□□□ 0.47
TRIM39-209ENST00000428728 CYP2U1Q7Z449 544 aa18■□□□□ 0.47
TRIM39-209ENST00000428728 C11orf74Q86VG3 221 aa18■□□□□ 0.47
TRIM39-209ENST00000428728 PGBD3Q8N328 593 aa18■□□□□ 0.47
TRIM39-209ENST00000428728 ZNF513Q8N8E2 541 aaPredicted RBP18■□□□□ 0.47
TRIM39-209ENST00000428728 FBXL13Q8NEE6 735 aa18■□□□□ 0.47
TRIM39-209ENST00000428728 RLN3Q8WXF3 142 aa18■□□□□ 0.47
TRIM39-209ENST00000428728 CNTNAP3BQ96NU0 1288 aa18■□□□□ 0.47
TRIM39-209ENST00000428728 ARID3AQ99856 593 aa18■□□□□ 0.47
TRIM39-209ENST00000428728 DUSP9Q99956 384 aaKnown RBP18■□□□□ 0.47
TRIM39-209ENST00000428728 BBS2Q9BXC9 721 aa18■□□□□ 0.47
TRIM39-209ENST00000428728 CNTNAP3Q9BZ76 1288 aa18■□□□□ 0.47
TRIM39-209ENST00000428728 DNAI2Q9GZS0 605 aa18■□□□□ 0.47
TRIM39-209ENST00000428728 PNPLA8Q9NP80 782 aa18■□□□□ 0.47
TRIM39-209ENST00000428728 POLMQ9NP87 494 aaPredicted RBP18■□□□□ 0.47
TRIM39-209ENST00000428728 DNAJC17Q9NVM6 304 aaKnown RBP18■□□□□ 0.47
TRIM39-209ENST00000428728 NAGPAQ9UK23 515 aa18■□□□□ 0.47
TRIM39-209ENST00000428728 GREM1O60565 184 aa17.99■□□□□ 0.47
TRIM39-209ENST00000428728 GTF2H1P32780 548 aa17.99■□□□□ 0.47
TRIM39-209ENST00000428728 WASP42768 502 aa17.99■□□□□ 0.47
TRIM39-209ENST00000428728 DHPSP49366 369 aaPredicted RBP17.99■□□□□ 0.47
TRIM39-209ENST00000428728 RNF43Q68DV7 783 aa17.99■□□□□ 0.47
TRIM39-209ENST00000428728 GRAMD4Q6IC98 578 aa17.99■□□□□ 0.47
TRIM39-209ENST00000428728 HTR3DQ70Z44 454 aa17.99■□□□□ 0.47
TRIM39-209ENST00000428728 DDX1Q92499 740 aaKnown RBP17.99■□□□□ 0.47
TRIM39-209ENST00000428728 BHMTQ93088 406 aa17.99■□□□□ 0.47
TRIM39-209ENST00000428728 SPACA7Q96KW9 195 aa17.99■□□□□ 0.47
TRIM39-209ENST00000428728 HEXIM2Q96MH2 286 aaKnown RBP17.99■□□□□ 0.47
TRIM39-209ENST00000428728 DUSP16Q9BY84 665 aa17.99■□□□□ 0.47
TRIM39-209ENST00000428728 MTPAPQ9NVV4 582 aaKnown RBP eCLIP17.99■□□□□ 0.47
TRIM39-209ENST00000428728 A0A0A0MRY4 1105 aa17.98■□□□□ 0.47
TRIM39-209ENST00000428728 CETN3O15182 167 aa17.98■□□□□ 0.47
TRIM39-209ENST00000428728 TYRP14679 529 aa17.98■□□□□ 0.47
TRIM39-209ENST00000428728 PRCPP42785 496 aa17.98■□□□□ 0.47
TRIM39-209ENST00000428728 KIF11P52732 1056 aa17.98■□□□□ 0.47
TRIM39-209ENST00000428728 PREPLQ4J6C6 727 aaPredicted RBP17.98■□□□□ 0.47
TRIM39-209ENST00000428728 EGFLAMQ63HQ2 1017 aa17.98■□□□□ 0.47
TRIM39-209ENST00000428728 ARMCX6Q7L4S7 300 aa17.98■□□□□ 0.47
TRIM39-209ENST00000428728 CCDC186Q7Z3E2 898 aa17.98■□□□□ 0.47
TRIM39-209ENST00000428728 MIB1Q86YT6 1006 aa17.98■□□□□ 0.47
TRIM39-209ENST00000428728 FMR1NBQ8N0W7 255 aaPredicted RBP17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms