RNA–Protein interactions for RNA: ENST00000428643.1

HMGA1P4-201, Transcript of high mobility group AT-hook 1 pseudogene 4, humanhuman

TSL 2 BASIC

Gene HMGA1P4, Length 334 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P4-201ENST00000428643 APOL5Q9BWW9 433 aa8.28□□□□□ -1.08
HMGA1P4-201ENST00000428643 POPDC2Q9HBU9 364 aa8.28□□□□□ -1.08
HMGA1P4-201ENST00000428643 TRPC7Q9HCX4 862 aa8.28□□□□□ -1.08
HMGA1P4-201ENST00000428643 ZNF334Q9HCZ1 680 aaPredicted RBP8.28□□□□□ -1.08
HMGA1P4-201ENST00000428643 HCFC1R1Q9NWW0 138 aa8.28□□□□□ -1.08
HMGA1P4-201ENST00000428643 CLDND1Q9NY35 253 aa8.28□□□□□ -1.08
HMGA1P4-201ENST00000428643 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP8.28□□□□□ -1.08
HMGA1P4-201ENST00000428643 IL37Q9NZH6 218 aa8.28□□□□□ -1.08
HMGA1P4-201ENST00000428643 TRPM5Q9NZQ8 1165 aa8.28□□□□□ -1.08
HMGA1P4-201ENST00000428643 IP6K2Q9UHH9 426 aa8.28□□□□□ -1.08
HMGA1P4-201ENST00000428643 SALL4Q9UJQ4 1053 aa8.28□□□□□ -1.08
HMGA1P4-201ENST00000428643 TMEM59LQ9UK28 342 aa8.28□□□□□ -1.08
HMGA1P4-201ENST00000428643 STAP1Q9ULZ2 295 aa8.28□□□□□ -1.08
HMGA1P4-201ENST00000428643 NAALADL1Q9UQQ1 740 aa8.28□□□□□ -1.08
HMGA1P4-201ENST00000428643 USTQ9Y2C2 406 aa8.28□□□□□ -1.08
HMGA1P4-201ENST00000428643 MTCH2Q9Y6C9 303 aa8.28□□□□□ -1.08
HMGA1P4-201ENST00000428643 CAPN6Q9Y6Q1 641 aa8.28□□□□□ -1.08
HMGA1P4-201ENST00000428643 CHD7Q9P2D1 2997 aa8.28□□□□□ -1.08
HMGA1P4-201ENST00000428643 SYNJ2BP-COX16A0A087WUM0 186 aa8.27□□□□□ -1.09
HMGA1P4-201ENST00000428643 CCDC195A0A1B0GUA6 201 aa8.27□□□□□ -1.09
HMGA1P4-201ENST00000428643 A0A1W2PRU2 124 aa8.27□□□□□ -1.09
HMGA1P4-201ENST00000428643 FAM92AA1XBS5 289 aa8.27□□□□□ -1.09
HMGA1P4-201ENST00000428643 GRID2IPA4D2P6 1211 aa8.27□□□□□ -1.09
HMGA1P4-201ENST00000428643 ZNF840PA6NDX5 716 aa8.27□□□□□ -1.09
HMGA1P4-201ENST00000428643 C2CD4BA6NLJ0 364 aa8.27□□□□□ -1.09
HMGA1P4-201ENST00000428643 DPYSL4O14531 572 aa8.27□□□□□ -1.09
HMGA1P4-201ENST00000428643 SPOPO43791 374 aa8.27□□□□□ -1.09
HMGA1P4-201ENST00000428643 TLR5O60602 858 aa8.27□□□□□ -1.09
HMGA1P4-201ENST00000428643 PALMO75781 387 aa8.27□□□□□ -1.09
HMGA1P4-201ENST00000428643 PROSCO94903 275 aa8.27□□□□□ -1.09
HMGA1P4-201ENST00000428643 FGF19O95750 216 aa8.27□□□□□ -1.09
HMGA1P4-201ENST00000428643 GLP2RO95838 553 aa8.27□□□□□ -1.09
HMGA1P4-201ENST00000428643 RHOP08100 348 aa8.27□□□□□ -1.09
HMGA1P4-201ENST00000428643 RALAP11233 206 aa8.27□□□□□ -1.09
HMGA1P4-201ENST00000428643 FOSL2P15408 326 aa8.27□□□□□ -1.09
HMGA1P4-201ENST00000428643 GABRR2P28476 465 aa8.27□□□□□ -1.09
HMGA1P4-201ENST00000428643 CDC25CP30307 473 aa8.27□□□□□ -1.09
HMGA1P4-201ENST00000428643 PGFP49763 221 aa8.27□□□□□ -1.09
HMGA1P4-201ENST00000428643 ZNF143P52747 638 aaPredicted RBP8.27□□□□□ -1.09
HMGA1P4-201ENST00000428643 HADHBP55084 474 aaKnown RBP8.27□□□□□ -1.09
HMGA1P4-201ENST00000428643 GNG11P61952 73 aa8.27□□□□□ -1.09
HMGA1P4-201ENST00000428643 ATP11AP98196 1134 aa8.27□□□□□ -1.09
HMGA1P4-201ENST00000428643 OGDHQ02218 1023 aa8.27□□□□□ -1.09
HMGA1P4-201ENST00000428643 CDO1Q16878 200 aa8.27□□□□□ -1.09
HMGA1P4-201ENST00000428643 PABPC1LQ4VXU2 614 aaKnown RBP8.27□□□□□ -1.09
HMGA1P4-201ENST00000428643 ZNF569Q5MCW4 686 aa8.27□□□□□ -1.09
HMGA1P4-201ENST00000428643 C10orf120Q5SQS8 335 aa8.27□□□□□ -1.09
HMGA1P4-201ENST00000428643 TRNP1Q6NT89 227 aa8.27□□□□□ -1.09
HMGA1P4-201ENST00000428643 C11orf63Q6NUN7 778 aa8.27□□□□□ -1.09
HMGA1P4-201ENST00000428643 ANKRD54Q6NXT1 300 aa8.27□□□□□ -1.09
HMGA1P4-201ENST00000428643 Q7L0L9 218 aa8.27□□□□□ -1.09
HMGA1P4-201ENST00000428643 GRASPQ7Z6J2 395 aaPredicted RBP8.27□□□□□ -1.09
HMGA1P4-201ENST00000428643 TADA2BQ86TJ2 420 aa8.27□□□□□ -1.09
HMGA1P4-201ENST00000428643 TAC4Q86UU9 113 aa8.27□□□□□ -1.09
HMGA1P4-201ENST00000428643 MIB1Q86YT6 1006 aa8.27□□□□□ -1.09
HMGA1P4-201ENST00000428643 TMC8Q8IU68 726 aa8.27□□□□□ -1.09
HMGA1P4-201ENST00000428643 SYCE1Q8N0S2 351 aa8.27□□□□□ -1.09
HMGA1P4-201ENST00000428643 LEMD2Q8NC56 503 aa8.27□□□□□ -1.09
HMGA1P4-201ENST00000428643 TRIM58Q8NG06 486 aa8.27□□□□□ -1.09
HMGA1P4-201ENST00000428643 GADD45GIP1Q8TAE8 222 aaPredicted RBP8.27□□□□□ -1.09
HMGA1P4-201ENST00000428643 ADAM32Q8TC27 787 aa8.27□□□□□ -1.09
HMGA1P4-201ENST00000428643 DQX1Q8TE96 717 aaKnown RBP8.27□□□□□ -1.09
HMGA1P4-201ENST00000428643 FNIP1Q8TF40 1166 aa8.27□□□□□ -1.09
HMGA1P4-201ENST00000428643 MYLIPQ8WY64 445 aa8.27□□□□□ -1.09
HMGA1P4-201ENST00000428643 OVCA2Q8WZ82 227 aa8.27□□□□□ -1.09
HMGA1P4-201ENST00000428643 MRPS31Q92665 395 aaKnown RBP8.27□□□□□ -1.09
HMGA1P4-201ENST00000428643 ZNF707Q96C28 371 aaPredicted RBP8.27□□□□□ -1.09
HMGA1P4-201ENST00000428643 C16orf45Q96MC5 204 aaPredicted RBP8.27□□□□□ -1.09
HMGA1P4-201ENST00000428643 CNPY3Q9BT09 278 aa8.27□□□□□ -1.09
HMGA1P4-201ENST00000428643 IRX2Q9BZI1 471 aaPredicted RBP8.27□□□□□ -1.09
HMGA1P4-201ENST00000428643 PRKD2Q9BZL6 878 aa8.27□□□□□ -1.09
HMGA1P4-201ENST00000428643 ATXN3LQ9H3M9 355 aa8.27□□□□□ -1.09
HMGA1P4-201ENST00000428643 GOLPH3Q9H4A6 298 aa8.27□□□□□ -1.09
HMGA1P4-201ENST00000428643 CCSER2Q9H7U1 834 aa8.27□□□□□ -1.09
HMGA1P4-201ENST00000428643 KCND1Q9NSA2 647 aa8.27□□□□□ -1.09
HMGA1P4-201ENST00000428643 ABCC13Q9NSE7 274 aa8.27□□□□□ -1.09
HMGA1P4-201ENST00000428643 OSER1Q9NX31 292 aa8.27□□□□□ -1.09
HMGA1P4-201ENST00000428643 CLIC5Q9NZA1 410 aa8.27□□□□□ -1.09
HMGA1P4-201ENST00000428643 COX16Q9P0S2 106 aa8.27□□□□□ -1.09
HMGA1P4-201ENST00000428643 LCMT1Q9UIC8 334 aa8.27□□□□□ -1.09
HMGA1P4-201ENST00000428643 RASAL2Q9UJF2 1139 aa8.27□□□□□ -1.09
HMGA1P4-201ENST00000428643 LAMA2P24043 3122 aaKnown RBP8.27□□□□□ -1.09
HMGA1P4-201ENST00000428643 ESPNB1AK53 854 aa8.26□□□□□ -1.09
HMGA1P4-201ENST00000428643 M0QYT0 321 aa8.26□□□□□ -1.09
HMGA1P4-201ENST00000428643 MSI1O43347 362 aaKnown RBP8.26□□□□□ -1.09
HMGA1P4-201ENST00000428643 NCK2O43639 380 aa8.26□□□□□ -1.09
HMGA1P4-201ENST00000428643 TBX10O75333 385 aa8.26□□□□□ -1.09
HMGA1P4-201ENST00000428643 TADA3O75528 432 aa8.26□□□□□ -1.09
HMGA1P4-201ENST00000428643 RNF8O76064 485 aa8.26□□□□□ -1.09
HMGA1P4-201ENST00000428643 FTCDO95954 541 aa8.26□□□□□ -1.09
HMGA1P4-201ENST00000428643 FYNP06241 537 aa8.26□□□□□ -1.09
HMGA1P4-201ENST00000428643 CKMP06732 381 aa8.26□□□□□ -1.09
HMGA1P4-201ENST00000428643 POU2F2P09086 479 aa8.26□□□□□ -1.09
HMGA1P4-201ENST00000428643 ZDHHC11BP0C7U3 371 aa8.26□□□□□ -1.09
HMGA1P4-201ENST00000428643 RARGP13631 454 aa8.26□□□□□ -1.09
HMGA1P4-201ENST00000428643 TNNT1P13805 278 aa8.26□□□□□ -1.09
HMGA1P4-201ENST00000428643 GJA1P17302 382 aa8.26□□□□□ -1.09
HMGA1P4-201ENST00000428643 HOXB8P17481 243 aaPredicted RBP8.26□□□□□ -1.09
HMGA1P4-201ENST00000428643 PTPN2P17706 415 aa8.26□□□□□ -1.09
HMGA1P4-201ENST00000428643 COMTP21964 271 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms