RNA–Protein interactions for RNA: ENST00000428634.1

PEX11B-202, Transcript of peroxisomal biogenesis factor 11 beta, humanhuman

TSL 2

Gene PEX11B, Length 667 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PEX11B-202ENST00000428634 A0A0U1RQJ8 604 aa12.65□□□□□ -0.38
PEX11B-202ENST00000428634 C2CD4BA6NLJ0 364 aa12.65□□□□□ -0.38
PEX11B-202ENST00000428634 ZNF197O14709 1029 aa12.65□□□□□ -0.38
PEX11B-202ENST00000428634 KIF5CO60282 957 aa12.65□□□□□ -0.38
PEX11B-202ENST00000428634 PAPLNO95428 1278 aa12.65□□□□□ -0.38
PEX11B-202ENST00000428634 GJB6O95452 261 aa12.65□□□□□ -0.38
PEX11B-202ENST00000428634 ZDHHC11BP0C7U3 371 aa12.65□□□□□ -0.38
PEX11B-202ENST00000428634 MYL4P12829 197 aa12.65□□□□□ -0.38
PEX11B-202ENST00000428634 RARGP13631 454 aa12.65□□□□□ -0.38
PEX11B-202ENST00000428634 PSMA2P25787 234 aa12.65□□□□□ -0.38
PEX11B-202ENST00000428634 GABRR2P28476 465 aa12.65□□□□□ -0.38
PEX11B-202ENST00000428634 GBP1P32455 592 aa12.65□□□□□ -0.38
PEX11B-202ENST00000428634 FLT3P36888 993 aa12.65□□□□□ -0.38
PEX11B-202ENST00000428634 MATKP42679 507 aa12.65□□□□□ -0.38
PEX11B-202ENST00000428634 RPL7AP62424 266 aaKnown RBP12.65□□□□□ -0.38
PEX11B-202ENST00000428634 ACAP1Q15027 740 aa12.65□□□□□ -0.38
PEX11B-202ENST00000428634 TAF5Q15542 800 aa12.65□□□□□ -0.38
PEX11B-202ENST00000428634 ARHGAP15Q53QZ3 475 aa12.65□□□□□ -0.38
PEX11B-202ENST00000428634 DCAF6Q58WW2 860 aa12.65□□□□□ -0.38
PEX11B-202ENST00000428634 RARS2Q5T160 578 aaKnown RBP12.65□□□□□ -0.38
PEX11B-202ENST00000428634 HECTD3Q5T447 861 aa12.65□□□□□ -0.38
PEX11B-202ENST00000428634 SNX30Q5VWJ9 437 aa12.65□□□□□ -0.38
PEX11B-202ENST00000428634 EP400NLQ6ZTU2 488 aa12.65□□□□□ -0.38
PEX11B-202ENST00000428634 HFE2Q6ZVN8 426 aa12.65□□□□□ -0.38
PEX11B-202ENST00000428634 RSRC2Q7L4I2 434 aaKnown RBP12.65□□□□□ -0.38
PEX11B-202ENST00000428634 BHLHA9Q7RTU4 235 aa12.65□□□□□ -0.38
PEX11B-202ENST00000428634 SCD5Q86SK9 330 aa12.65□□□□□ -0.38
PEX11B-202ENST00000428634 TMC8Q8IU68 726 aa12.65□□□□□ -0.38
PEX11B-202ENST00000428634 ZNF276Q8N554 614 aa12.65□□□□□ -0.38
PEX11B-202ENST00000428634 EMC1Q8N766 993 aa12.65□□□□□ -0.38
PEX11B-202ENST00000428634 TPCN2Q8NHX9 752 aa12.65□□□□□ -0.38
PEX11B-202ENST00000428634 JOSD2Q8TAC2 188 aa12.65□□□□□ -0.38
PEX11B-202ENST00000428634 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.65□□□□□ -0.38
PEX11B-202ENST00000428634 ATRIPQ8WXE1 791 aa12.65□□□□□ -0.38
PEX11B-202ENST00000428634 KHSRPQ92945 711 aaKnown RBP eCLIP12.65□□□□□ -0.38
PEX11B-202ENST00000428634 ATXN3LQ9H3M9 355 aa12.65□□□□□ -0.38
PEX11B-202ENST00000428634 ZNF334Q9HCZ1 680 aaPredicted RBP12.65□□□□□ -0.38
PEX11B-202ENST00000428634 CLDND1Q9NY35 253 aa12.65□□□□□ -0.38
PEX11B-202ENST00000428634 DNMT3BQ9UBC3 853 aaKnown RBP12.65□□□□□ -0.38
PEX11B-202ENST00000428634 TRIM10Q9UDY6 481 aa12.65□□□□□ -0.38
PEX11B-202ENST00000428634 COG5Q9UP83 839 aa12.65□□□□□ -0.38
PEX11B-202ENST00000428634 PAXBP1Q9Y5B6 917 aa12.65□□□□□ -0.38
PEX11B-202ENST00000428634 DUSP10Q9Y6W6 482 aa12.65□□□□□ -0.38
PEX11B-202ENST00000428634 PLXNA3P51805 1871 aa12.64□□□□□ -0.39
PEX11B-202ENST00000428634 ZNF840PA6NDX5 716 aa12.64□□□□□ -0.39
PEX11B-202ENST00000428634 USP27XA6NNY8 438 aa12.64□□□□□ -0.39
PEX11B-202ENST00000428634 TMEM110-MUSTN1A8MSY1 372 aa12.64□□□□□ -0.39
PEX11B-202ENST00000428634 DPYSL4O14531 572 aa12.64□□□□□ -0.39
PEX11B-202ENST00000428634 RNF8O76064 485 aa12.64□□□□□ -0.39
PEX11B-202ENST00000428634 MOCS3O95396 460 aa12.64□□□□□ -0.39
PEX11B-202ENST00000428634 GLP2RO95838 553 aa12.64□□□□□ -0.39
PEX11B-202ENST00000428634 F11P03951 625 aa12.64□□□□□ -0.39
PEX11B-202ENST00000428634 RHOP08100 348 aa12.64□□□□□ -0.39
PEX11B-202ENST00000428634 PFKLP17858 780 aa12.64□□□□□ -0.39
PEX11B-202ENST00000428634 DDX6P26196 483 aaKnown RBP eCLIP12.64□□□□□ -0.39
PEX11B-202ENST00000428634 SLC1A1P43005 524 aa12.64□□□□□ -0.39
PEX11B-202ENST00000428634 PTPN9P43378 593 aa12.64□□□□□ -0.39
PEX11B-202ENST00000428634 SULT1E1P49888 294 aa12.64□□□□□ -0.39
PEX11B-202ENST00000428634 TUBP50607 506 aa12.64□□□□□ -0.39
PEX11B-202ENST00000428634 ZNF143P52747 638 aaPredicted RBP12.64□□□□□ -0.39
PEX11B-202ENST00000428634 EPHA5P54756 1037 aa12.64□□□□□ -0.39
PEX11B-202ENST00000428634 RBM10P98175 930 aaKnown RBP12.64□□□□□ -0.39
PEX11B-202ENST00000428634 ITIH3Q06033 890 aa12.64□□□□□ -0.39
PEX11B-202ENST00000428634 MESDQ14696 234 aa12.64□□□□□ -0.39
PEX11B-202ENST00000428634 SLC25A52Q3SY17 297 aa12.64□□□□□ -0.39
PEX11B-202ENST00000428634 CES5AQ6NT32 575 aa12.64□□□□□ -0.39
PEX11B-202ENST00000428634 C11orf63Q6NUN7 778 aa12.64□□□□□ -0.39
PEX11B-202ENST00000428634 TMC5Q6UXY8 1006 aa12.64□□□□□ -0.39
PEX11B-202ENST00000428634 GRASPQ7Z6J2 395 aaPredicted RBP12.64□□□□□ -0.39
PEX11B-202ENST00000428634 HS6ST3Q8IZP7 471 aa12.64□□□□□ -0.39
PEX11B-202ENST00000428634 DEFB123Q8N688 67 aa12.64□□□□□ -0.39
PEX11B-202ENST00000428634 C12orf76Q8N812 135 aaPredicted RBP12.64□□□□□ -0.39
PEX11B-202ENST00000428634 TRIM58Q8NG06 486 aa12.64□□□□□ -0.39
PEX11B-202ENST00000428634 UBE2Q2Q8WVN8 375 aa12.64□□□□□ -0.39
PEX11B-202ENST00000428634 MYLIPQ8WY64 445 aa12.64□□□□□ -0.39
PEX11B-202ENST00000428634 EDEM1Q92611 657 aa12.64□□□□□ -0.39
PEX11B-202ENST00000428634 ZNF707Q96C28 371 aaPredicted RBP12.64□□□□□ -0.39
PEX11B-202ENST00000428634 PABPC5Q96DU9 382 aaKnown RBP12.64□□□□□ -0.39
PEX11B-202ENST00000428634 CDX2Q99626 313 aaPredicted RBP12.64□□□□□ -0.39
PEX11B-202ENST00000428634 CNPY3Q9BT09 278 aa12.64□□□□□ -0.39
PEX11B-202ENST00000428634 LRRC3Q9BY71 257 aa12.64□□□□□ -0.39
PEX11B-202ENST00000428634 NACA2Q9H009 215 aa12.64□□□□□ -0.39
PEX11B-202ENST00000428634 NMUR1Q9HB89 426 aa12.64□□□□□ -0.39
PEX11B-202ENST00000428634 IL21Q9HBE4 155 aa12.64□□□□□ -0.39
PEX11B-202ENST00000428634 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.64□□□□□ -0.39
PEX11B-202ENST00000428634 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.64□□□□□ -0.39
PEX11B-202ENST00000428634 ZMYM5Q9UJ78 669 aa12.64□□□□□ -0.39
PEX11B-202ENST00000428634 SALL4Q9UJQ4 1053 aa12.64□□□□□ -0.39
PEX11B-202ENST00000428634 NAALADL1Q9UQQ1 740 aa12.64□□□□□ -0.39
PEX11B-202ENST00000428634 PATJQ8NI35 1801 aa12.63□□□□□ -0.39
PEX11B-202ENST00000428634 MTCL1Q9Y4B5 1905 aaKnown RBP12.63□□□□□ -0.39
PEX11B-202ENST00000428634 SOBPA7XYQ1 873 aa12.63□□□□□ -0.39
PEX11B-202ENST00000428634 LINC01565O15544 149 aa12.63□□□□□ -0.39
PEX11B-202ENST00000428634 TLR5O60602 858 aa12.63□□□□□ -0.39
PEX11B-202ENST00000428634 PROSCO94903 275 aa12.63□□□□□ -0.39
PEX11B-202ENST00000428634 F9P00740 461 aa12.63□□□□□ -0.39
PEX11B-202ENST00000428634 FOSL2P15408 326 aa12.63□□□□□ -0.39
PEX11B-202ENST00000428634 MAN1A1P33908 653 aa12.63□□□□□ -0.39
PEX11B-202ENST00000428634 ATP5C1P36542 298 aaKnown RBP12.63□□□□□ -0.39
PEX11B-202ENST00000428634 CTC1Q2NKJ3 1217 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms