RNA–Protein interactions for RNA: ENST00000427526.6

LIG1-202, Transcript of DNA ligase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LIG1, Length 3,027 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-202ENST00000427526 LRRC42Q9Y546 428 aa14.87□□□□□ -0.03
LIG1-202ENST00000427526 A0A087WZ62 844 aa14.86□□□□□ -0.03
LIG1-202ENST00000427526 RBM47A0AV96 593 aaKnown RBP14.86□□□□□ -0.03
LIG1-202ENST00000427526 DNAJC6O75061 913 aa14.86□□□□□ -0.03
LIG1-202ENST00000427526 SPAG6O75602 509 aa14.86□□□□□ -0.03
LIG1-202ENST00000427526 VDRP11473 427 aa14.86□□□□□ -0.03
LIG1-202ENST00000427526 SMPD1P17405 629 aa14.86□□□□□ -0.03
LIG1-202ENST00000427526 IL4RP24394 825 aa14.86□□□□□ -0.03
LIG1-202ENST00000427526 JADE1Q6IE81 842 aa14.86□□□□□ -0.03
LIG1-202ENST00000427526 NPLOC4Q8TAT6 608 aa14.86□□□□□ -0.03
LIG1-202ENST00000427526 PTCD3Q96EY7 689 aaKnown RBP14.86□□□□□ -0.03
LIG1-202ENST00000427526 FDXACB1Q9BRP7 624 aaPredicted RBP14.86□□□□□ -0.03
LIG1-202ENST00000427526 DENND2DQ9H6A0 471 aaPredicted RBP14.86□□□□□ -0.03
LIG1-202ENST00000427526 CYP3A43Q9HB55 503 aa14.86□□□□□ -0.03
LIG1-202ENST00000427526 IL1BP01584 269 aa14.86□□□□□ -0.03
LIG1-202ENST00000427526 VTNP04004 478 aa14.86□□□□□ -0.03
LIG1-202ENST00000427526 DLDP09622 509 aaKnown RBP14.86□□□□□ -0.03
LIG1-202ENST00000427526 GPD1P21695 349 aa14.86□□□□□ -0.03
LIG1-202ENST00000427526 FKBP1BP68106 108 aa14.86□□□□□ -0.03
LIG1-202ENST00000427526 FAM47CQ5HY64 1035 aa14.86□□□□□ -0.03
LIG1-202ENST00000427526 ZNF484Q5JVG2 852 aa14.86□□□□□ -0.03
LIG1-202ENST00000427526 PRPF39Q86UA1 669 aaKnown RBP14.86□□□□□ -0.03
LIG1-202ENST00000427526 RTP4Q96DX8 246 aa14.86□□□□□ -0.03
LIG1-202ENST00000427526 RNF157Q96PX1 679 aa14.86□□□□□ -0.03
LIG1-202ENST00000427526 HEY2Q9UBP5 337 aa14.86□□□□□ -0.03
LIG1-202ENST00000427526 A0A0G2JND7 137 aa14.85□□□□□ -0.03
LIG1-202ENST00000427526 STAG3L1P0CL83 205 aa14.85□□□□□ -0.03
LIG1-202ENST00000427526 PYGBP11216 843 aa14.85□□□□□ -0.03
LIG1-202ENST00000427526 CYP3A5P20815 502 aa14.85□□□□□ -0.03
LIG1-202ENST00000427526 ATICP31939 592 aa14.85□□□□□ -0.03
LIG1-202ENST00000427526 TFDP2Q14188 446 aa14.85□□□□□ -0.03
LIG1-202ENST00000427526 GRB14Q14449 540 aa14.85□□□□□ -0.03
LIG1-202ENST00000427526 SYCP2LQ5T4T6 812 aa14.85□□□□□ -0.03
LIG1-202ENST00000427526 UBA3Q8TBC4 463 aa14.85□□□□□ -0.03
LIG1-202ENST00000427526 PPP1R13LQ8WUF5 828 aa14.85□□□□□ -0.03
LIG1-202ENST00000427526 RXFP2Q8WXD0 754 aa14.85□□□□□ -0.03
LIG1-202ENST00000427526 SKA1Q96BD8 255 aa14.85□□□□□ -0.03
LIG1-202ENST00000427526 PIWIL1Q96J94 861 aaKnown RBP14.85□□□□□ -0.03
LIG1-202ENST00000427526 FAM111AQ96PZ2 611 aa14.85□□□□□ -0.03
LIG1-202ENST00000427526 NFKBIZQ9BYH8 718 aa14.85□□□□□ -0.03
LIG1-202ENST00000427526 CPA4Q9UI42 421 aa14.85□□□□□ -0.03
LIG1-202ENST00000427526 AKT3Q9Y243 479 aa14.85□□□□□ -0.03
LIG1-202ENST00000427526 IKBKGQ9Y6K9 419 aa14.85□□□□□ -0.03
LIG1-202ENST00000427526 H3BRB1 525 aa14.85□□□□□ -0.03
LIG1-202ENST00000427526 ADCY6O43306 1168 aa14.85□□□□□ -0.03
LIG1-202ENST00000427526 INHBAP08476 426 aa14.85□□□□□ -0.03
LIG1-202ENST00000427526 C15orf59Q2T9L4 293 aaPredicted RBP14.85□□□□□ -0.03
LIG1-202ENST00000427526 FAM182AQ5T1J6 154 aa14.85□□□□□ -0.03
LIG1-202ENST00000427526 CST9Q5W186 159 aa14.85□□□□□ -0.03
LIG1-202ENST00000427526 ILDR2Q71H61 639 aa14.85□□□□□ -0.03
LIG1-202ENST00000427526 PLD5Q8N7P1 536 aa14.85□□□□□ -0.03
LIG1-202ENST00000427526 KCNV2Q8TDN2 545 aa14.85□□□□□ -0.03
LIG1-202ENST00000427526 FAF2Q96CS3 445 aa14.85□□□□□ -0.03
LIG1-202ENST00000427526 HEXIM2Q96MH2 286 aaKnown RBP14.85□□□□□ -0.03
LIG1-202ENST00000427526 NUDCD1Q96RS6 583 aa14.85□□□□□ -0.03
LIG1-202ENST00000427526 PARK7Q99497 189 aaKnown RBP14.85□□□□□ -0.03
LIG1-202ENST00000427526 TUT1Q9H6E5 874 aaKnown RBP14.85□□□□□ -0.03
LIG1-202ENST00000427526 PLAC1Q9HBJ0 212 aa14.85□□□□□ -0.03
LIG1-202ENST00000427526 TTC36A6NLP5 189 aa14.84□□□□□ -0.03
LIG1-202ENST00000427526 PDGFRAP16234 1089 aa14.84□□□□□ -0.03
LIG1-202ENST00000427526 ARFIP2P53365 341 aa14.84□□□□□ -0.03
LIG1-202ENST00000427526 YWHAGP61981 247 aaKnown RBP eCLIP14.84□□□□□ -0.03
LIG1-202ENST00000427526 PRAMEF19Q5SWL8 479 aa14.84□□□□□ -0.03
LIG1-202ENST00000427526 PLEKHH3Q7Z736 793 aa14.84□□□□□ -0.03
LIG1-202ENST00000427526 ZNF467Q7Z7K2 595 aaPredicted RBP14.84□□□□□ -0.03
LIG1-202ENST00000427526 SLC26A11Q86WA9 606 aa14.84□□□□□ -0.03
LIG1-202ENST00000427526 TINF2Q9BSI4 451 aa14.84□□□□□ -0.03
LIG1-202ENST00000427526 CADM1Q9BY67 442 aaKnown RBP14.84□□□□□ -0.03
LIG1-202ENST00000427526 ARL8BQ9NVJ2 186 aa14.84□□□□□ -0.03
LIG1-202ENST00000427526 PAK5Q9P286 719 aa14.84□□□□□ -0.03
LIG1-202ENST00000427526 MTO1Q9Y2Z2 717 aaKnown RBP14.84□□□□□ -0.03
LIG1-202ENST00000427526 TTLL3Q9Y4R7 772 aa14.84□□□□□ -0.03
LIG1-202ENST00000427526 KLF11O14901 512 aa14.84□□□□□ -0.03
LIG1-202ENST00000427526 CCDC22O60826 627 aa14.84□□□□□ -0.03
LIG1-202ENST00000427526 ENTPD5O75356 428 aa14.84□□□□□ -0.03
LIG1-202ENST00000427526 YWHAZP63104 245 aaKnown RBP14.84□□□□□ -0.03
LIG1-202ENST00000427526 INCA1Q0VD86 236 aa14.84□□□□□ -0.03
LIG1-202ENST00000427526 C1orf228Q6PIY5 440 aa14.84□□□□□ -0.03
LIG1-202ENST00000427526 CDHR3Q6ZTQ4 885 aa14.84□□□□□ -0.03
LIG1-202ENST00000427526 FAM183BPQ6ZVS7 135 aa14.84□□□□□ -0.03
LIG1-202ENST00000427526 TTC8Q8TAM2 541 aa14.84□□□□□ -0.03
LIG1-202ENST00000427526 CPB2Q96IY4 423 aa14.84□□□□□ -0.03
LIG1-202ENST00000427526 TUBB6Q9BUF5 446 aa14.84□□□□□ -0.03
LIG1-202ENST00000427526 RAB6BQ9NRW1 208 aa14.84□□□□□ -0.03
LIG1-202ENST00000427526 H7C0C1 242 aa14.84□□□□□ -0.03
LIG1-202ENST00000427526 PFKMP08237 780 aa14.84□□□□□ -0.03
LIG1-202ENST00000427526 BGNP21810 368 aa14.84□□□□□ -0.03
LIG1-202ENST00000427526 ATP5OP48047 213 aa14.84□□□□□ -0.03
LIG1-202ENST00000427526 SARNPP82979 210 aaKnown RBP14.84□□□□□ -0.03
LIG1-202ENST00000427526 CDK16Q00536 496 aa14.84□□□□□ -0.03
LIG1-202ENST00000427526 AMHR2Q16671 573 aa14.84□□□□□ -0.03
LIG1-202ENST00000427526 FAM187BQ17R55 369 aa14.84□□□□□ -0.03
LIG1-202ENST00000427526 FAM110CQ1W6H9 321 aa14.84□□□□□ -0.03
LIG1-202ENST00000427526 LCLAT1Q6UWP7 414 aa14.84□□□□□ -0.03
LIG1-202ENST00000427526 C4orf50Q6ZRC1 276 aa14.84□□□□□ -0.03
LIG1-202ENST00000427526 CAND1Q86VP6 1230 aaKnown RBP14.84□□□□□ -0.03
LIG1-202ENST00000427526 PQLC3Q8N755 202 aa14.84□□□□□ -0.03
LIG1-202ENST00000427526 LINC01465Q8N7H1 131 aa14.84□□□□□ -0.03
LIG1-202ENST00000427526 EMID1Q96A84 441 aaPredicted RBP14.84□□□□□ -0.03
LIG1-202ENST00000427526 BTBD10Q9BSF8 475 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms